KEGG   Coregonus clupeaformis (lake whitefish): 121539652
Entry
121539652         CDS       T08357                                 
Symbol
wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
  KO
K11274  chromosome transmission fidelity protein 4
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cclu03036]
    121539652 (wdhd1)
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    121539652 (wdhd1)
SSDB
Motif
Pfam: WD40_WDHD1_1st Mcl1_mid Ctf4_C WD40 WD40_Prp19 Beta-prop_EML_2 HMG_WDHD1 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_HPS5 EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N eIF2A WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_SCAP HMG_box WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_WDR75_2nd Beta-prop_WDR75_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 121539652
NCBI-ProteinID: XP_041704251
LinkDB
Position
34:complement(38711169..38762460)
AA seq 1128 aa
MPCERKPMRYGHSEGHTEVCFDDTGKYIVTCGSDGDVRIWESLDDDDPKSINVGEKAYSL
ALKNGKLVTAASNNTVQIHTFPEGDPDGILTRFTTNATHVTYNSSGSRVAAGSSDFMVKV
VEVSDSSQQKTLRGHNAPVLSVTFDPKDEFLASASCDGSVAVWNIEEQTQVTSWPLLQKS
NDVINAKSLCRLAWQPRAAKLLAVPVETTVQLYQRDSWAHVSTLSDDLGTQAINIVAWSP
CGKFLAAGSIGGLLTVWDVESKLCVERQKHEKGYTVCGLAWHPSGGQIAYTDTEGCLGVL
DGLSSSSMSSSTTAAKSTKQAPASYDNLFDDDDDNGPMDEGVSEGARSPANNPEDDDDDL
MPATGRARNRSAFLDDENSLDTGSLKPGLDKFGDDDDAGSAIVPPAGSAAPLRPVYEGPM
PTPPQKAFQPGSTPAHLMHRFMMWNSVGIVRGYNDDQDNAIDVEFHDTAVHHAMHLTNTL
GHTVADLSQEAVLLACPGTDELASKLQCLHFSSWDTNKEWMVDLPKGEDVRALCLGQGWA
AAATSTLMLRLFSIGGVQRELFSLPGPVVCMAGHGEQLLVVYHRGTGFDGEQALGVQLLQ
FGHKRQQVIHGESLPLSPKSHLSWLGFTAEGTPCFIDSEGVVRLLNRSLGNTWTPVCNTR
DNCKGKSDHYWVVGVHENPQQLRCIPCKGSRYPPTLPRPAVAVLPFKLPLCQTTTEKGQM
EEQYWRSVLLHNHYGFLSSSGYEIDEEGQSQAQKEQQELLMKMFALSCKLEREFRCVELA
ELMTQNVVTLAIRYASRSRRMALAQRLSELALEKANQLQGEEPQEEEEEEPLQYTRHNTG
YAQSSSELGADRQHSSHRQAQEEEVEEEEGQEEHMDVAESKRQRLNPFAKGTAASPEKPS
PKPVSKEGRVNPFKVSSGLGKPGSAGGQPRVTNVLDSMTSSSRKPTALLSSSGSAGKPNK
TPVLKPLAPRPKTKTQSTLLHMSAPKAANKKPAEEREPAVCRLKQTEAPPPASPAENVEN
KNPKTGFQLWLEENRKIILADNPELEETDVIKEAMGRFRTLSADDRLSWTERAKGQSGDV
ADMKKRKRGEEESRGDKNGQSEADESSAKKKKPLDTSAKLSAFAFNKN
NT seq 3387 nt   +upstreamnt  +downstreamnt
atgccctgtgaaagaaagccaatgcgctacggccactcggagggacacactgaggtttgt
tttgatgacactggaaagtatatagtcacttgtggaagcgatggggatgtgagaatatgg
gagagtctggatgatgacgatcccaagtccatcaacgtgggggagaaggcatattcttta
gccttgaagaatgggaagctggtcacagcagcctccaacaacacagtgcagatccacacg
ttccctgagggtgacccagatggcatcctcacccgctttaccaccaatgccacccatgtc
acgtacaacagcagcggctccagagtagcggccggatccagtgacttcatggtgaaggta
gtggaggtgtccgacagcagtcagcagaagaccctgcggggacacaatgcccccgtcctc
agtgtcacctttgaccccaaggatgagttcctggcctctgccagctgtgatggatctgta
gctgtgtggaacattgaggaacagactcaggtgaccagctggccgctgctgcagaagtcc
aatgatgtcatcaatgccaagtccctgtgccgactggcctggcagcccagggccgctaag
ctcctggccgttcctgtggagacaacggtgcagctgtaccagagagactcctgggcccac
gtgagcacactctctgatgaccttggcacacaggcaataaacatagtggcctggtcgccc
tgtgggaagttcttggctgccgggagcatcgggggtttgctgacggtctgggacgtggag
agcaagctgtgtgtggaaaggcagaagcatgagaagggctacaccgtgtgtggactggct
tggcatccttcgggcggtcaaatagcctacaccgacacagagggctgtctgggcgtgctg
gatgggctctcctcttcttcaatgtcttcctccactaccgctgcaaagagcaccaagcag
gctccagccagctacgacaaccttttcgacgacgatgacgacaacggacccatggacgag
ggtgtcagcgagggcgcccgttcacccgccaataaccctgaggacgatgacgacgacctc
atgcctgccacggggcgagcacggaacaggagtgccttcctcgacgacgagaactcacta
gacacaggctcgctcaaaccagggctggataaatttggtgacgatgacgacgcgggcagc
gccatagtgccccccgctggctcggctgctcccctccggcccgtctacgaggggcccatg
cccaccccaccacagaaggccttccagccaggctccaccccggcacacctcatgcatcgt
ttcatgatgtggaactcggtgggaatcgtgcgtggctacaatgacgaccaggacaacgcc
atcgacgtggagttccacgacacagccgtgcaccatgccatgcacctcaccaacaccctg
ggccacaccgtggcagacctctcccaggaggccgtgctgctcgcctgccccggcactgac
gagctcgccagtaagctccagtgcctccacttctcgtcgtgggacaccaacaaggagtgg
atggtggatctgcccaagggggaggacgtgcgggccctatgcctgggccagggctgggcg
gcggccgccaccagcaccctcatgctgcgtctcttctccatcggaggggtgcagagggag
ctgttcagcctgcccggacccgtggtctgcatggctgggcacggggagcaactgctcgtc
gtctaccaccgaggcacagggtttgacggagaacaggcccttggggtccagctgctgcag
tttggacacaagagacagcaggtcatccacggggagtccctccccctctcccccaaatcc
cacctatcatggttgggcttcacagccgagggcaccccatgcttcatcgactctgagggc
gtggtgcgcctgctaaaccgctccctgggaaacacatggacgcctgtgtgtaacaccagg
gacaactgcaagggcaagtcagaccactactgggtggtgggagtgcacgagaacccccag
cagctccggtgtatcccatgtaaagggtcccggtacccccccacgttgcccaggcctgcc
gtcgccgtcctgcccttcaagctgcccctctgtcagaccaccacagagaagggccagatg
gaggagcagtactggcgctcggtgctcctccacaaccactacggcttcctgtcgtccagt
ggctacgagatagacgaggagggtcagagccaggcccagaaagaacagcaggagctgctc
atgaagatgtttgccctgtcgtgtaaactggagcgggagttccgctgcgtggaactggcc
gagctaatgacccagaacgtagtgaccctggccatccgctacgcctcgcggtcccgccga
atggctctagcccagcgcctcagtgaactggccctggagaaggccaatcagcttcagggg
gaggagccccaggaggaggaagaggaggagccactccagtacaccagacacaacactggg
tacgcccagagcagcagtgagctgggtgcggatcgccaacacagcagccacagacaagca
caggaggaagaggtggaggaagaggagggtcaggaagaacatatggacgtagccgagagc
aaaagacaacgtctcaatccctttgctaaagggactgctgcatcacctgagaaaccttct
cccaaacccgtaagcaaagagggacgtgtgaaccctttcaaggtgagcagcgggttaggg
aagccgggttcggcggggggccagcccagggtgaccaacgtcctggacagcatgacgtcg
tccagcaggaagcccactgctctgctgagcagctccggctctgcggggaaaccgaacaaa
acgcctgtcctaaagcctctggctcccagacccaagaccaagacccagtctacactgctg
cacatgagcgctcccaaagcagccaataagaagccagcagaggagcgggagccggcagtg
tgtaggctgaaacagacagaggcaccgcctccagcctctccagcagaaaatgttgagaac
aagaatcccaagacgggcttccagctgtggctggaggagaacaggaagatcatcctggct
gacaacccagagctggaggagactgacgtcatcaaggaggccatgggccgcttcaggacc
ctgtctgcagacgaccggctgtcctggacagagcgggcaaaaggacagtctggagacgtg
gcggatatgaaaaaacgaaagagaggagaagaagagagcaggggagacaagaatggacag
agtgaggcagatgagagcagtgccaaaaagaaaaagcccttagacacctcagccaagctc
tcagcatttgctttcaacaaaaattaa

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