Coregonus clupeaformis (lake whitefish): 121539660
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Entry
121539660 CDS
T08357
Name
(RefSeq) photoreceptor cilium actin regulator-like
KO
K24165
photoreceptor cilium actin regulator
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121539660
04812 Cytoskeleton proteins [BR:
cclu04812
]
121539660
Cilium and associated proteins [BR:
cclu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121539660
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
121539660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retinal
NMB1110_3rd
Motif
Other DBs
NCBI-GeneID:
121539660
NCBI-ProteinID:
XP_041704262
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All DBs
Position
34:complement(40565954..40575377)
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AA seq
1160 aa
AA seq
DB search
MGCSPSKGNNFGANGTFRRGRTLLPEGKESTGESQSDDGGSGGSSGTGDIDGETWERRDG
ERGLAGQTHSVQKEAPSTPQKKRPSLTVLVPEGVILDKKVGTQETDNTGQHGKEKQGDKQ
EKGGRKPKKNVKGVKPTKKKEKEKKAPLVEQKVDFPEPLVKAHQAAYAFLNPSISKYEIL
LGLLDQATQTQVSVQPMVTFMAMRYEEINRGLEEMADQGERLLKDNGEHLAWPSPMKNLS
SSPPLKSGSINAEPPPDLLQQLLQYTTQRMRNVGQSVGDIGDSALEDAAEYFTSVSELLE
EKLKAKHAAETRLMQLLTRIEAASLRKPGPEDSALFSEDSGIGAESESLAGSERRLRRES
CESTGSNRTTPYSPIGSNTSPVQQGAPRQKFVKKMSPSNSLNSIDSVCTIMGKGSASLDN
GEEEDDDDEGEEEGEGGRKRSNASLSDPNQQPCRLAPKRIENPQNVEMTLKMKDSISGRI
RFVPSQRDSAKTKPTDSPKTRCQWTEQGERSPKRPQRAASVRRAIKKTPVPKEHRSQSAE
SLRSKGEDPTLIELERTQRDLSQRLERMSNGRMEGNTKTGLSKQKPGDAAKSPASNRLCP
TLQKNNNNLPIQDKAGLTKHHSREQRAGKDIEEENKKKDKKTIKGPLKATPPPSPTLGPL
KATPPPSPPLSHRPSSGLYRGRNSVKRLIDTFSQGVLEPNQEASKVLGPLKGVRKCGVPV
MPGVGDIEAILSCGVSSCRTDDLDLESLPPPPLEVLLDNSFEGAQSLTVSDVDDGVASRG
RSPIPKRATASQKMRASMHSVSVLPSRGNLPQGSSSMSPARTVRRDISASSRVSHHEPQL
EVDPEIEEAATLYKQARKIIHLRHSSESPIEKGQAVPRRPSPNRAASGGRQGDNSPSETV
PPTSTVSSQPPATPPVSRTRMLPSTPSTPSGLHRRLPSPTTFRKQPMPPSSNSPSVICKL
PTPPPLQRRLPSPPASRQVLTPNSSSSGSTHSFKAPSPPASPRVQRWRRENSSKDSSPGA
SVISQFISNARSVFCPASSSLFEAQPCPVPRPPQAWASTSGSVVPRSWGDRGRLPMSVQG
PKLFIRRSHSDRRPSLTLPSRAPIVSFAETCGSEPAISTQGLEDEPSRDDESWDSQSDFR
GNIHSASYPDLCIVGQGLTL
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgggatgttccccatctaaaggtaacaattttggggctaatggcacctttaggaggggc
aggacattattaccagagggcaaagagagcacaggggagtcccagtctgatgatggaggg
agtggaggctcctccggaacaggagacattgatggagagacttgggagaggagagatggg
gaaaggggactggctgggcagacccactctgttcagaaggaagcaccttcaaccccacag
aaaaagagaccctccctgaccgtgttggttccagagggggtcatcctggataaaaaagtg
gggactcaagagacagataacacagggcaacatggaaaagagaaacaaggagataagcaa
gaaaagggtggacgaaagccaaagaaaaatgtcaaaggagtcaaaccaactaaaaagaaa
gagaaggagaaaaaagctccccttgtggagcagaaagttgactttccggaacctttagtg
aaagcccaccaggctgcttatgcctttttaaacccaagcattagcaaatatgagattcta
ctggggttactggaccaggcaacccaaacccaggtgtctgtgcagccaatggtgaccttc
atggctatgcgctacgaggaaatcaaccgagggctggaggaaatggcagaccagggtgaa
aggcttctgaaggacaatggggagcatctagcctggccaagcccaatgaaaaacctatcc
agttctccccctctcaaatctggttccatcaatgctgagcctccaccagatctcttgcag
cagctacttcagtataccactcaaaggatgcgaaatgtgggccagtctgtgggcgacatt
ggggactctgccttggaggacgcagctgagtactttacctctgtctctgagctgctggag
gagaaattaaaagccaagcatgcggcggagacaagactgatgcagttgctgactcgtatt
gaggctgcctcacttcgtaagcccggaccagaggactctgcattgttcagtgaggacagt
ggaattggagctgaaagcgagtcactagctgggtctgaaagacgactccgccgtgaaagc
tgtgagtccactgggtccaaccgaaccactccttacagtcctattggcagcaatactagc
ccagtccagcaaggggcaccaaggcaaaagtttgttaaaaaaatgagccccagcaactcc
ctaaactccatagactcggtgtgcaccataatgggtaaaggatctgcctccttagacaat
ggtgaggaggaggatgatgatgatgagggggaagaagagggtgaaggcggcaggaagcga
tctaatgcctcactatctgatcctaaccagcaaccttgtcgcctggcacccaagcgcata
gaaaaccctcaaaatgtggaaatgaccctgaaaatgaaagattccataagtggtcggatt
cgatttgttccctcacaacgtgacagtgccaaaactaaaccaacagacagccccaagacc
aggtgccagtggacagagcagggggagcgatcaccaaaaaggccccaacgagcagcctct
gtacggagggcaattaaaaagacccctgttcctaaagagcaccgttcacaatctgcagaa
tcccttcgcagcaaaggtgaagatccaacactgattgaactagagaggacacagagggat
ctgagtcagagattagagaggatgagcaacggcaggatggagggaaataccaagacaggt
ctcagtaaacagaagccaggagatgctgcgaagtccccagcatccaatcgtctatgcccg
accctgcagaagaacaacaacaatcttccaatccaggacaaggcagggcttacgaagcat
cactccagggaacagagggcaggcaaggacattgaggaggaaaataaaaagaaagacaag
aaaaccatcaaggggccactgaaagccaccccacctcctagccctacattggggccattg
aaagccaccccacctccaagccctccattgtcacatcgtccatcctcaggactgtaccgg
gggaggaattctgtcaaaaggctgattgataccttcagccagggggtgttagagcccaac
caagaagcatccaaagtgttggggcctctcaaaggggttcgaaagtgtggtgtccctgtt
atgcctggagtaggtgacattgaagccatactgagctgtggggtcagcagttgtaggaca
gatgacttggacctagaaagtctgccaccccctcctcttgaagtcttattggacaattcc
tttgaaggtgcacagagcctcacagttagcgacgtagatgatggggttgcaagtagaggt
cgatcccctattcccaagagggctacggcatctcagaagatgcgtgcctccatgcattct
gtgtcagtcctacccagcagaggcaacctgccccagggctctagcagcatgtctcctgcc
cggactgtacggcgtgatatctctgctagttccagggttagccaccatgagcctcagctg
gaggtagaccctgagatagaggaggcggccactctctacaagcaagctagaaaaatcatc
cacttgcggcattcctcagagtctccaattgagaaaggtcaggctgtgcccagaaggccc
tctcccaatcgagcagcatcgggagggagacagggagataacagtccctctgagacagtg
cctcccacttcaacagtcagtagccaaccacctgccaccccgcctgtatctagaacccga
atgctgccttccacgccttcaaccccaagcggcttgcatcgacggctacccagtcccacc
accttcagaaagcagcctatgcctccatcctcaaacagcccttcggtcatttgcaaactt
cccaccccaccaccgcttcagagaagacttccaagcccacctgcctcaagacaagtattg
accccaaactccagctcttctggctccacacattctttcaaggcaccctcaccaccagcg
tccccaagggtacaaagatggagacgggagaacagcagcaaggactccagcccaggggcc
tcagttatctctcagtttatcagtaacgctcgctctgttttctgcccggcctcgtcctca
ctgtttgaggcccagccttgccccgtaccccgccccccccaggcttgggcctccaccagt
ggtagtgttgtcccgcgatcctggggagatcgtggtaggctccctatgtctgtgcaaggg
cccaagcttttcatccgacgcagccactcagacaggaggcccagtctaaccctgccgtcc
agggcacccatcgtctcatttgcagagacttgtgggagtgaaccagccatcagcacacaa
gggctggaggacgagccaagcagagatgacgagtcgtgggacagccaatcagatttcaga
gggaatatccactctgcttcgtacccagacctgtgcatcgtgggtcagggccttacattg
tga
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