Coregonus clupeaformis (lake whitefish): 121539737
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Entry
121539737 CDS
T08357
Name
(RefSeq) beta/gamma crystallin domain-containing protein 1-like
KO
K25509
beta/gamma crystallin domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121539737
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
121539737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Crystall
Ricin_B_lectin
RicinB_lectin_2
Motif
Other DBs
NCBI-GeneID:
121539737
NCBI-ProteinID:
XP_041704382
LinkDB
All DBs
Position
25:672587..702777
Genome browser
AA seq
2386 aa
AA seq
DB search
MGTNLCGYLFSCAKSNRCVCSPSGYLSFWGVFSVSSQSSDRVLNRIGSLFSIKKKKSQSG
SLSADSEDGSWLGPGSPVSPQSSGSPLSPHQPPEEDWLRTPTTTRREGEVVEAGAGPVRG
SLPELQAEGSVFSTSSSPSTSSLASLVVVDRGDLLFAGSDSSGRGSVREVQVCRVSRAEA
ESDGEADRNYWNLTPTNPSSTRADQVPELSPTEDVVGEVSRRLQVHLEQTTVKEGEGSGG
GSQVVQTTLRSFELSQSHLKTDVSSLVTESKKTSLKTYVGGKGSYLVGVTVGSQSCTPSS
SDPQPEGEDSPAMGKKNRRRALKSTSSSSAETAPPTQTTLPGGEEGTTQDSPVKLHKALW
VETHLREEEVERESADSHPVMAIPVTVAPVEYPDTAAVSAAAAGGREPNPAFRESKTTNT
AQPESNSPGTDSESSSESKEESKEEKRRSVKLSQSEKLFPKKVYVSPKASFDGDEQTKTE
LKNNDIIDLASKIPQKSEVKLLPSLKKVNVDLKEPNNDYVITAGEITEGTDSDRRHHDPK
AVDSSPTTPTPELDEASPTTTMPGCKIQPNTGSSRVRCQGTTQVSQSKPGTTQVSQSKPG
DKVGNVASRSKNPPPPVGPKSKAVLGMAKGKGLKDGGKAGISSGAPSQRTEVMSPKLKDQ
PTAGKTEVTDSPKSRIPKKSQTEAASKPPLSPVTTSVVDVSVALSPPVSGSKPQKIPKPK
HLMIKTDKKPIAEEVKEVGSGGKQTPGPVKSEEVSPTKVPVLSPVKSSKEKSKENSDKVN
LVNGLEKDLEDNTTATAKTSEPKDVKKQAPTCPDSTNSSMIPKSRLPKSPDNSLSPVRKM
KDGKPQTIDTGSKKKENTERASGVNSRPSTPTSPKQQELPSPEERPPDERLTPEPEKGRK
LPCPLQKHLPQQASNKSTPCDDGDTPTPPSLVPTKPEKPASLGLKKQSEDRSSSSTPETK
LDAKSENAKNKSLSVKTTCITQEQQTKPSPDLSSETESDCNYVEALTDTPLQQMGPVSPG
VVLEKRPPEPSPIVSASGRPTHEEVIYTSNKTELTDRIHIDTETQANQKSDEHNENASIA
SEKLLLSAREGISNTNQPVEHGLDVAKDSSPKNASTVVESGESQDTAKQPTLIGLEEKSK
KLANVQTPDIVPIGNGIVSDISIVSGKETEVQKGGEQVKVTDVITEAAIVQKPIENGEVQ
LNKELPSLTQNLADAHSGPHKEYKEDKPGEAASKSTVTKMEVKQESKTITTKAQKEKVTK
QEERPSEGATKILDTKQDSKTISTKAQEKKVLVLKEPPKTTKATSKAELPLQPPTSLKLP
SPPKPLHLKQESPSSWLNVERGSKREQKRETKRRLDCSACEDESLAETDNVEDFIRSIKE
LGTPFPLAPKRHHDHAKNSSPPFALPAIKEDRFENPFDADGFQFGLKKRVKDKETPAMLM
KKQASDREEKTQTRRANAEDSLLFKALQSPSRARRKPGCQTDGKDGEVEMKVELKREVEK
KEELWEETGQITSRLGRSSLLSNLLSSPRTSRRDKGDPSSSVSNGAPPSPTTQGTVPERA
GGRGMNPGLRMGVVAAGESIISPSSPPPLPSFTELKLPDTLEQYLRKDKGSSQSSATQST
MASPVMGLGQGTGLKGLTLGLHPATNHITQAPLIGLPAANPKIPEARGFHKRPGKIVLHE
QAQFGGEAYEVFGDVEDASMMKLSPVISVRVIRGCWLLYEKPGFQGRTIALEEGPMELVN
VWAEEVTPGALDQIGLPVPTSPMVIGSIRLAVRDYSLPRIDLFTEVNGLGGMTSFCDDTI
EICSYGNIQNTGSIKVHSGVWLVYGDPGFGGLLTVLEVGEYPCPEAWAFPQPFIGSLKTL
KMGGIKVEHPNEVKALVYERPCFEGECVEIDNDVYNFREEEEGGEEEEEEEEEAEVNPVR
RKTLCSVGSIKILRGLWVGYDEPEFEGHQYLLEEGEYPDWREWGGYGDQLLSLRPVRTDF
LSPHVKLFSEREFGERGVNVDLLGPVTNMEGTGFGPKTQSINVQDGVWVAFENPGFSGEL
YILEKGLYGSPEDWGGQNLQISSLQPVFQDILGGSCKFKLQLFSEPGFQGRVVVLEDSVV
ALEENFFPGSCRVLAGSWVAYEGSQFTEHTYVLEEGDYPNTESMGCLGPDSTIRSVQTIS
HEFSFPSITLFSKVGCRGRRVVLTGGVVNLQLAGVDGCIRSLVIDGGMWVLYEGSNHRGR
QILLPPSKLGDWCKFSSWPRIGSLRPLLQKQVYFRLRSRETGYVMSLSGPLDDIKLLRVQ
ALEETGGVDQVWIYHDGVLHCKLVEDCCLQITGSVVMAGSRLCVSPPEPGKDNQLWNITP
DGLVRCHLKPDLVLEVKGGQSYDKTQVILNTFDERKHNQRWSLEIL
NT seq
7161 nt
NT seq
+upstream
nt +downstream
nt
atgggaactaacctctgtggttatttgtttagctgtgccaaaagcaacaggtgtgtctgt
tctccatctgggtatttatctttctggggggttttctctgtctcttcccagagctcagac
agagtgttgaaccgcatcggcagtttattttccataaagaagaagaagagccagagcggt
tcactctcagcagactcagaggatggatcctggctaggtcctggctctcccgtctccccc
cagtcctctggttctcctctctccccccaccaaccaccagaggaagactggctaaggacc
cccaccactacccggagagagggtgaggtagttgaagctggagctgggccagtgcgggga
agtttgccggagctccaggcggagggatcggtgttcagtaccagctccagccctagtacc
tccagcctagcctctctggtggtggtggaccgaggggacctgctgtttgcaggcagcgac
agcagtggccgtggcagcgtgagggaagtgcaggtgtgcagggtgagccgggccgaggca
gagtcagacggagaggcagacaggaattattggaatctgactcccacaaacccgtcctcc
accagagcagaccaagtcccagagctcagccccactgaggacgtagtaggagaggtgagc
aggaggctgcaggtacatctggaacaaaccactgtgaaagaaggcgaagggtcgggaggg
ggcagccaagtggtccaaaccaccctcaggtcgtttgagctctcccaatctcaccttaag
actgacgtcagctctctggtcacagagtctaaaaagacctccctgaaaacatatgttgga
gggaaggggagttacctggtgggagtgactgtaggctctcagtcctgcaccccgtcctcc
tcagatccccagccagagggggaggacagcccagccatgggaaagaagaacaggaggagg
gctctgaaatccaccagcagcagctcggctgaaacagctccccccacacagaccacgtta
cctgggggagaggaggggacgacgcaggactcacctgtgaagctacacaaagccttgtgg
gtggaaacacacctgagagaagaggaggtggagagggagagtgcagactcgcatccagtc
atggccatacctgtgactgtggcccctgtggagtaccctgatactgcagcagtatcagca
gcagcagccggtggcagagagccaaatccagccttcagggagtccaaaacaacaaacaca
gcccagccagagtcaaacagtccaggcacagactcagagagcagctcagagagcaaagag
gagagcaaagaggaaaagcgcaggagtgtgaaactgtctcaaagtgagaagcttttccct
aagaaggtgtatgtgagccctaaggccagttttgatggggacgagcagacaaagacagag
ctgaaaaacaatgacatcatagacttggcttcaaagattcctcagaagtcggaggtgaaa
ctcctgccaagcctcaaaaaagtgaatgtagacctcaaggaaccaaacaatgactatgtc
atcactgctggagagataactgagggtacagactctgatcgaagacaccatgaccccaag
gctgtagacagttccccaacgaccccaaccccagagctggatgaggcctctccaaccaca
accatgccaggatgtaaaatacagcccaacacagggagttcaagggttcgatgtcagggg
acaacccaggtctcccagtctaaaccagggacaacccaggtctcccagtctaaaccaggg
gacaaagtaggaaatgtagccagtcggtcaaagaacccacctcctccggttggacccaag
tccaaagctgtcctgggcatggctaagggaaagggtctcaaagatggtggcaaggcaggg
atttctagtggggctccatcacaaaggacagaggttatgtcacctaaattaaaggatcaa
cccaccgcaggaaaaacagaggtcaccgacagccccaagtcgagaatccccaaaaagtca
cagacagaagctgcatcaaaacccccactgtcaccagtcacaacctcagtggttgatgtt
tcagtggctctgtctcctcctgtgtctggttccaaaccacagaagatacctaaacctaaa
catttaatgattaaaacagacaaaaagcctatcgctgaggaggtgaaggaagtgggttca
ggggggaaacaaactccagggcctgttaagtcagaagaggtgtcacctactaaagtacca
gtcttgtcacctgtgaagtccagcaaagaaaagagcaaagagaattcagataaggtaaac
ctggtcaatgggctggagaaagaccttgaggacaacaccactgccacagccaaaacaagt
gaacccaaagatgtcaaaaagcaggctccaacatgcccagacagcaccaacagcagcatg
ataccaaagagcaggttacccaaatcccctgacaactcattgtctccggtcagaaagatg
aaagatggcaaaccccaaaccatcgacacaggcagtaaaaaaaaagaaaacactgagaga
gcatcaggtgtcaatagtaggccttccacaccaaccagcccaaagcagcaggagctgccc
agcccagaggaaaggcccccagatgagagactgacccctgaacctgagaagggaagaaag
ctgccttgccctttgcaaaaacatctgccccaacaggcctccaataagagcactccctgt
gacgatggggacacacccacccctccctcactggtaccaaccaagccagagaaacctgcc
tcccttggacttaagaagcagagtgaggacaggagcagtagtagtacacctgaaacaaaa
ctggatgcaaaatcggaaaatgcaaaaaataaatctctatcggtcaaaactacctgtatt
acacaggaacaacaaaccaaaccatccccagatctctcatccgagacagagagtgactgc
aactatgtggaagccttaaccgatacaccactgcagcagatgggtcctgtgagcccaggt
gtagtcctggagaaacgcccacctgaaccaagccccattgtgtctgcctcaggcagacct
acccatgaggaagtaatatatacatccaacaagactgagttgactgatcgcattcatatt
gacactgagacccaagctaatcagaaaagtgatgagcataatgaaaatgcttctatagct
tcagagaagctcttacttagtgctagagaagggatatccaatacgaatcagcctgtggaa
cacggcctggatgtagcaaaggacagctcacccaaaaacgcctccactgtggttgaaagt
ggagagagtcaagatacggcaaaacagccaactctcattggcttggaggaaaaatcaaag
aaactagctaatgttcaaaccccagatatagtacccattggtaatggcatagtttctgat
atatccatagtgtctgggaaagagactgaagtacagaaagggggagagcaagtgaaggtc
accgacgttataacagaggctgcgattgttcagaaaccaattgaaaatggtgaggtccaa
ctgaacaaagagcttccttcactgacacagaatttggcagatgcacatagcgggccacac
aaagaatacaaagaggacaaaccgggtgaggcagcatctaagagcacagttactaagatg
gaggtaaaacaggaatcaaagaccataactacaaaagctcagaaggagaaagtgacaaaa
caagaagaaagacccagcgaaggagccactaagatattagacacaaaacaggactcaaaa
accataagcacaaaagctcaggagaagaaggtcttagtcctcaaagaaccccctaaaact
acaaaagcaacctccaaggctgagctgcctcttcagccgccaacttctctgaagctcccc
tctccccctaaaccgctccatctgaaacaggaatctccatccagctggctgaatgtggag
cgcggctccaaacgggagcagaagagggagaccaagaggaggctggactgttcagcctgc
gaggatgagagtctggctgagactgacaacgtggaggacttcatcaggagcattaaggaa
ctgggcaccccctttcccctggctcccaagaggcaccacgaccatgccaagaactcctcg
cccccctttgccctgcccgccatcaaggaggaccgcttcgagaacccttttgacgctgat
ggcttccagtttggcctgaaaaagagggtgaaggataaagaaaccccggccatgttgatg
aagaaacaggcctcagacagggaggagaagacacagacaagacgggctaatgcagaggac
agccttctcttcaaagccctccagtctccatctagagcccggagaaaaccaggatgtcaa
acagacgggaaagatggcgaggtggaaatgaaggtagagttgaagagggaagtagagaag
aaagaggagctctgggaagaaaccgggcagatcacgtcgcggctaggaaggtcgtcccta
ctctccaacctgttgagctcccccaggacttccagaagggacaaaggggatccttcctcc
tcagtctctaatggtgctcctccctctcctaccacccagggcacagtgccagaaagggcg
ggtgggagaggtatgaatccgggcctgcgtatgggtgtggttgcagctggtgagtcaata
atcagtccctcctcaccacctcctctcccctcgttcactgagctaaagctgccagatacc
ctggagcaatatctcaggaaagataaaggatcttcacagagtagcgctacacagagtaca
atggctagccctgtaatgggcctaggtcagggtactggactaaagggacttaccttagga
cttcatccagccaccaaccacatcacacaggcccctctgattggtcttcctgcagccaac
cctaagattccagaagcgagagggttccacaaacggcctgggaagatagtgctccatgag
caggctcagtttggaggagaggcctacgaggtgtttggggatgtggaggatgcctccatg
atgaagctgtctcctgtcatctcagtcagggtcatcaggggatgctggctgctgtatgag
aagccagggttccaggggcggaccatcgccctggaggaggggcccatggagctggtcaac
gtgtgggcagaggaggtgacaccaggggcactggatcagattggtctgcctgtgccaacc
tcacccatggtcatcggatctatccgcctggcagtgagggactacagtctacctcggatt
gacctgttcactgaggtgaatggtctggggggaatgacatcattctgtgacgacaccatc
gagatctgctcttacgggaacatacagaacaccggctccatcaaggtccactctggagtc
tggctggtgtatggtgacccagggtttgggggtctcctaacggtgttggaggtgggagag
tatccctgtccagaagcctgggcattccctcagcccttcatcggatcgctgaaaaccctc
aaaatgggtgggataaaggtggagcatcctaatgaagtaaaggctctggtgtacgagagg
ccgtgcttcgagggcgagtgtgtggagattgacaatgatgtgtacaacttcagagaggag
gaagaggggggggaggaggaggaggaggaggaggaggaggcagaagttaatccagtcaga
aggaagacgttgtgttctgtgggatccatcaagatccttcgtggactctgggttggctat
gatgagccagagtttgaaggtcaccagtatctcctggaggagggggagtatcctgactgg
agggagtggggaggctatggagaccagctcctgtcactacgccctgtccgcactgatttc
ctgtctccccatgtgaagttgttcagtgagagggaatttggggagagaggggtcaacgtg
gacctgctagggcctgtcactaacatggagggcaccggcttcggccccaagacacagtcc
atcaatgtccaggatggagtgtgggttgccttcgagaaccctgggttctccggagaactt
tacattctagagaaaggcctctacggaagcccagaggactggggaggacagaacctccag
atatcctcactgcagccagtcttccaggatatcctgggtggatcatgcaagttcaagctc
cagctgttctcagagcctgggttccagggcagagtggtggtactggaggacagtgtggta
gccctggaggaaaacttcttccctggctcctgtagagtactggctgggagctgggtggcg
tatgaaggatcccagttcacagagcacacttatgtcctggaggagggagactaccccaac
actgagtctatgggctgtctgggtcctgactctaccatccgctccgtacagaccatcagc
catgagttctccttcccgtccataacgttgttcagtaaggttggctgtagaggccgtagg
gtggtgctgactggaggggtggtgaacctgcagctggctggggtggacggatgcatacgc
tccctggtgatcgacggaggaatgtgggtgctgtatgaggggagtaatcaccgcggccgt
cagatcctgcttccgcccagcaaactgggtgattggtgcaagttcagcagctggccgcga
atcggatccctgcgaccactattgcagaagcaggtgtacttccgtctgcggagcagagag
acaggctacgtgatgtccctgtcagggcctctggatgacatcaaactgctgcgggtccag
gccctggaggagactgggggagtggaccaggtctggatctaccatgatggagtcctacac
tgcaagctggtggaggactgttgcctgcagatcacggggagcgttgtcatggcgggcagc
aggctgtgtgtgtctcctccagagccagggaaagacaaccagctgtggaacattacccca
gatggcctggtccgatgccacctcaaacctgatctggtgctggaggttaaaggtggacaa
agttatgacaaaactcaagtgattctcaacacatttgatgagagaaaacacaaccaaaga
tggtctttggagatcctgtaa
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