Coregonus clupeaformis (lake whitefish): 121539744
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Entry
121539744 CDS
T08357
Name
(RefSeq) centrosomal protein of 170 kDa protein B-like
KO
K16463
centrosomal protein CEP170
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121539744
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
121539744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CEP170_C
FHA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
121539744
NCBI-ProteinID:
XP_041704387
LinkDB
All DBs
Position
25:10797167..10826669
Genome browser
AA seq
1678 aa
AA seq
DB search
MSVTSWFLVSSSGTRHRLPPEMIFVGREECELMLQSRSVDKQHAVVNYSPATDEHMVKDL
GSLNGTFVNDLRIPDETYITLKLSDVIRFGYDILLVNMPSLALLPHCHVYILERSQHKVP
EEALKHEKYTSQLQMSVETLEARKREKERQHAKEKTRDSSCFKQEKAEHKAALAAVASEA
PVSRPTPLYGQPSWWGEDDAEHSEGQRPDEDPAENTKEGSRHEVNGSLSDSQAKTNYSHH
RELSYFEIPTNQFQQREVHEVPTKDTDPPAGPVPVLPPAPTSTPTPPVVQSHASFTIEFD
ECTPGKIKVKDHVTKFSFRQQHKLPGKEALTAPTEVMSTESKVADWLVQSDVRMMRRRSR
TEDMFSTKSELPIYNEASTGHHYEAIQLKPLMGLHMSLPPQLAPPRPFTHPDSEEPLSSS
PPESHSPSQSQDKADPQQAFVIEFFDDNPRKKRSQSFTNNTAQLDSPGIRNKLEKRCGPS
TPTQQYTIPLKGAGSGGPQRAGSLRREKMEDRISNGFSSRSIPLRPFRSVGRRSKLAQDF
TAELLRESRQESRPSINTTWERNTSPVSPTTSPSPTVVAAAPHSHQTPPSPPQPPVPYLT
QTSSPVHQSVPLKAPLMPKAPRPMEAPRPMEAPRPMEAPHPMEAPRGLEAPSPTQPGGLG
NEEDDTLSEAGTYTIETEVQDKEVEEARSKIELVFGVVEGPEQPSQTAAAAAYKPVEYQD
REECRESSSVDLRPAPGQGQNLVQVPGGSKWVSRWASLADSYTDSGPASGLFNIPSQMDL
SGGVGGRTVHQATLSRNINNVESEGQSSRTQRILPQAPSMEKNETPTPSILIHQDTYFTY
DIKERSSRVPGPQEDLNNLSVQHDLDPDSLSDASKSDDGSIVEQRKTPTPETTDKSSSQS
REEERPTLPAKSTSFYIGSKETVSKQEQGSRPNTPKTERKPPPPKTPQFSIATLTKQQDG
QDLQKTVKLNSSAPKLDYQGRVSPQPKEISVSLVRQESFTKDQPSDAAQVTRLPHISSQP
ALSDPDPAEAFQGVCSQDTHSYLKGTKDTLAALEAKLQAQPPDVAPRPIDYSLSGESDMD
SASTASQHSNQTAPKTGSKKPFITSGLQRERSSASSFTQESSRQQSALDRLSEKRRSQGV
DISRKPEQDRRLGMRRCAGKHVSMDLSDDPQSFSLPYWPETISSDQEGSRPAACKKYTVP
LQKEDFTKSSKVTQALSRSNSMSAPRPTRASMLRRARLGEASDNEGTETDRISQNSQEAS
GTTKASQDSKKQLSRLDMLALPRKRTSSFTTPSDAESSAPRTGFSNRSTESNSGSGRKAS
VAGPSTKPALGRASGAGKLITRVRSSSAKYTSSTASSRRRQKGSDCTSTSEEEFDSNQST
PKHKRSHTPSASRSQPLIPPRPKPRSRDSDQESHEGDAYQNWSSHSAEIARLSQDLAKDL
AILAREIHDVTGDADPQSSSAVEANTPVSTITAREVLVHPIPEAGVNYHRVPPGSAAARD
PDQTMMNDQEHNSKHRGWDQEAVVVDDLMLNPVSQISLAIRENTEQLAEKIKVLFHNKTD
VWREKQCFEAMLSNENDIPIMKGSNKEITYILKELRRVQRQLEVINTIIEPSVILEPAKA
STPSAPSSAGLRPSRAPSRDWRTSGSQQSGGGGPSASSRPSECVRRSAMASEAESYVV
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgacatcatggttcctggtcagcagctcaggcacaagacaccggttgccacca
gagatgatctttgtaggccgggaggagtgcgagctcatgttgcagtcgcgcagtgtggac
aagcagcatgctgtcgtcaactacagcccagccacagacgagcatatggtgaaggacctg
ggcagcctgaacgggacttttgtgaatgatctgagaatcccagacgagacttacatcacc
ctgaagctctctgatgtcatccgctttggatatgatatccttttagttaatatgccttcc
ttagctctgcttccacattgtcatgtgtacatcctggagaggagtcaacacaaggtgcca
gaggaggctctcaaacatgagaagtacaccagccagctgcagatgagtgtggagaccctg
gaggccaggaagagagagaaggagaggcagcatgctaaggagaagaccagagactcatcc
tgcttcaaacaggagaaagccgagcataaagctgccctcgcagcagtggccagcgaggct
ccggtgtccaggcccactcctctgtatggacagccgtcgtggtggggggaggatgatgct
gaacacagtgaaggacagcggccagacgaggaccctgcagagaatactaaagagggctcc
agacatgaggtcaacggctccctgtcagacagccaggccaagacaaactactcacaccac
agggagctaagctactttgagattcccaccaatcagttccagcagcgggaggtccatgag
gttcccactaaggacactgacccccctgctggccctgtccctgttctccccccagcaccc
acctccacccccacacctcctgtggtgcagagccacgcctccttcaccatcgagtttgac
gaatgcacaccgggcaagatcaaggtcaaggaccatgtgaccaagttttccttccgccag
caacacaagctcccgggtaaggaggcattgacagcgcccactgaggtgatgtcaacggag
agcaaggtggctgattggctggtccaaagcgacgtgagaatgatgaggaggaggtctcgg
acggaggacatgttcagcacaaagagtgagctgcccatctacaacgaggcttctacaggc
caccattatgaggctatccaattaaagccactgatgggccttcacatgtctctaccaccc
cagctggccccaccgagacccttcacccaccctgactcagaggagcctctgtccagctcc
cctccagagtctcactccccttctcagagccaggacaaagcagacccccagcaggccttc
gtcatcgagttctttgacgacaatccacgcaagaagcgttcacagtccttcaccaacaac
acagcccagcttgacagcccaggcatcaggaacaagctggagaaaaggtgcggccccagc
acccccacccagcagtacaccattcccttgaagggtgcaggttctggaggcccgcagagg
gccggctccctgaggagggagaagatggaggatcggatcagtaacggcttctcctcccgc
tccatccctctcaggccctttagaagtgtgggccgcaggtccaagctggcccaggacttc
acggctgagttgctgagggagtccagacaggagtctaggcctagcatcaacacaacctgg
gagaggaatacttcacctgtgtctcctaccaccagcccttcaccaacagtagtggcagca
gccccccattcccaccagaccccaccaagcccccctcagccccctgttccatacctgact
cagacctcctcccctgtccaccagtctgtgcccctaaaagcccctctgatgcccaaggcc
ccacgccccatggaggccccacgccccatggaggccccacgccccatggaggccccacac
cccatggaggccccacgcggcctggaggccccaagccccacgcagcctggaggcctgggg
aatgaggaggatgataccttgagtgaagcaggcacctacaccatcgagacggaggtccag
gataaagaggtggaggaggcacgcagcaagatagaactggtgtttggtgttgttgagggg
ccagagcagcccagccagactgctgcagcagcagcatataagcctgttgagtatcaggac
agggaggagtgtagagagagtagctcggtggatctgaggccagctccagggcagggacag
aatctggtgcaggtacctggtggctctaagtgggtgtctcgctgggccagcctggcagac
agctacacagactctggccctgcctcaggcctcttcaacatcccctcacagatggacctg
tcaggaggagttggtgggagaaccgtccatcaggcgacgctcagtcggaacatcaacaat
gtggaatcggaaggccagagttccagaacacagcggattctgcctcaggcaccgtcgatg
gagaagaatgagactccaactcccagcattcttatccatcaggacacttactttacctat
gatatcaaagagaggagctccagagtccccggaccacaggaggacctcaacaacctgtct
gtacagcacgaccttgacccagacagcctgagtgatgccagtaagtcagacgacggctcc
atcgtggagcagaggaagacacccacaccagagacgacagacaagagttcatctcagagc
agagaagaggagaggcccacactcccagccaagtctacatcattctacatcggctctaag
gagactgtgtctaaacaggagcagggatccagacccaatacacctaagactgagagaaaa
ccacctcctcccaagacaccacagttctccatagccaccctgaccaaacaacaggatgga
caagacttacagaagacggtcaagctcaactcatcagctcccaagctggactaccagggc
agagtcagccctcagcccaaggagatctcagtgtctctggtcaggcaggagagcttcact
aaggaccagccaagtgatgctgcccaggtcaccagactccctcacatctccagccagcct
gctctgagtgaccctgaccctgctgaggcgttccagggtgtctgcagccaggacacccac
tcctacctcaaagggaccaaggacactctggctgccctggaggccaagctccaggcccag
ccacctgatgttgctcctcgccccatagattactctctgtctggggagtctgacatggac
tcagccagcactgccagccagcacagcaaccagactgcccccaagaccggatccaagaag
ccctttatcactagtggccttcagagggagaggtcctctgccagctccttcacccaggag
tccagtcgccagcagtcagccctcgatcgcctgtcagagaagcggcggtcccagggagtg
gacatcagcaggaagcctgaacaagaccggaggctggggatgagacgctgtgcaggaaaa
catgtctccatggacctgagtgatgacccccagagcttcagcttaccctactggcctgaa
accatctcctcagaccaggagggctcccggcccgctgcatgcaagaagtacaccgtccct
ctgcagaaagaggatttcactaagtcctccaaagtgacccaggccctaagccgctccaac
agcatgtctgccccacggcccacaagagcttcaatgcttcgccgggctcgcctgggcgag
gcgtccgacaacgagggcacagagacggacagaatctcccagaactcacaggaagccagt
gggaccaccaaggcctcccaggacagtaagaagcagctctccaggctggacatgctggct
ctgccccggaagaggactagctccttcaccactcccagtgatgcggagtcctctgcaccc
aggacaggcttctccaaccgcagcacagagtccaacagcggctctggccgtaaggcctcc
gtggctgggcccagcactaagcctgcgctaggcagggcctctggagcaggcaagctcatc
acccgcgtccgctccagcagtgccaaatacaccagcagcacagccagctctagacgacga
cagaaaggctctgactgcacctccacctccgaggaggagtttgactctaaccagagcacc
cctaaacacaaacgctcacacaccccctcagcctcccgctcccagcctctcatcccccca
cgccccaaaccccgctcacgagactctgaccaggagagtcacgagggagacgcctaccag
aactggtcctcccacagtgctgagatagcaagactcagtcaggacctggctaaagatctg
gccatccttgccagggagatccatgatgtgactggtgatgctgatcctcagagctcttct
gcagtggaggccaacacacctgtctctaccatcaccgccagggaggtgttggtccatccc
atcccagaggctggtgtgaactaccatagagttcctcctggatccgctgcagccagggac
cccgaccagaccatgatgaatgaccaggaacacaactctaagcacagaggatgggaccag
gaagcggttgttgtggatgatctgatgttgaatccagtatcccagatctctctggctatt
cgagaaaacacggagcagctagctgagaaaataaaggtactattccacaacaaaactgac
gtttggagggagaagcaatgctttgaagcaatgctcagtaatgaaaacgacatccccatc
atgaaaggctcaaacaaggaaatcacatatattctgaaagagctcagaagagttcagaga
caacttgaagtcatcaacactatcattgaacccagtgtaattcttgagccagccaaagcc
tccactcctagtgccccctcctcagccgggttgaggccatccagggccccttcgagagac
tggagaacctcaggttcccagcagagtggtggtgggggcccctctgccagctccaggccc
agtgagtgcgtcaggagatcagctatggcctctgaggcagagagctacgtggtctga
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integrated database retrieval system
