Coregonus clupeaformis (lake whitefish): 121539797
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Entry
121539797 CDS
T08357
Name
(RefSeq) bromodomain-containing protein 8-like isoform X1
KO
K11321
bromodomain-containing protein 8
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121539797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121539797
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
121539797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
DUF1722
Motif
Other DBs
NCBI-GeneID:
121539797
NCBI-ProteinID:
XP_041704411
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Position
3:complement(7350052..7363522)
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AA seq
781 aa
AA seq
DB search
MASGVGKHKMLSAGPTEPWSLREKLCLASSVMRSGDQNWVSVSRAIKPFSEQGRPADWFS
QKHCASQYSELLEATEAPKRKRGEKGEVVETIEDVIVRRLTAERIEELKKLLRDTQDKYR
KLKKEVDLIQTGHLDSRLEELWTDVSQKKKQDEDEADLKRKATETAYQARQAVKNTPKRV
PSVTVRSPLGASPTSMEAQTDTPTPPTDTAMPQAEEPSGTTMAQGVAVFLPSSDAPMVGP
KEGSLGSLVDDSPQKRLLSQKSTPPPSPLLSELLKKGSLISASPRLVVEGDVAAAGLANG
GLPTTTLTIPAGLEVASSVGEAGSEVVKAELGEEVELVKEVGLVEEDLVAVSYMEDELDL
KTVEDLITIIEEKVDDSVEALDAAAVEAALSLCEEAVSAGHSLSGPWEAHDLKASEPGPT
VQSDPTQGLQGGVGAGANPGGLEPETESGRGEAKEGKDCEGLETVGTDVAPSVAADDSLA
GSEVTEEGVLEVEGSLSTAVKTENEEWTQPEPNTPCLDSEDSSGSGKESKEVKDEDGGSD
GDPDEGMEMKECGEGEGEGPYLSEVEPAASESEDGYGPSSQRYTTADSLASSPASSQFSI
CGEDQEAVQAQKIWKKAIMLVWRAAANHRYASVFLQSVSDDIAPGYHSIVHRPMDLSAIK
KSIEAGQIRTTAEFQRDIMLMFQNAVMYNSSDHDVFHMALEMQRDVLEHVQQFLATQLIM
QTSESSISTKSLRGREGGRKPGEPVEKDSVPMASPAFLLSLFDGGTRGRRCAIEADMKMK
K
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtggagtcgggaaacacaagatgctttccgctggcccgacggaaccgtggtca
ttgagggagaaactatgcctagcctcctctgttatgaggagcggagaccaaaactgggtg
tcggtcagcagagccatcaagcctttctcagagcaaggccgcccagcagactggttttct
cagaagcactgtgcctctcagtactctgagctgctggaggccacagaggctccaaagcgt
aagcgtggggagaagggtgaggtggtggagaccattgaggatgtgatcgtccgaagactc
actgccgagaggatagaagagctgaagaaactactgagagacacacaggacaaatacagg
aagctgaagaaggaggtggatctgatccagaccggacatctggactcccggctggaggag
ctgtggacagacgtatcacagaaaaagaagcaggatgaggacgaggcagatcttaagagg
aaggccacagagacagcctatcaggctcgccaagcggttaagaacacgcccaagcgggtg
cccagtgtcactgtacgctcccctctgggtgccagtcccacgagcatggaggcacagaca
gacacccccacacccccaacagacacagccatgccccaggcagaggagccctctggcacc
actatggcccagggcgtggctgtgtttctaccatcgtcggatgctccaatggtggggcct
aaggagggaagcctggggtctctggttgacgactccccacagaagaggctcctcagtcag
aagtccacaccacctccctcccctctcctctcagagctgctgaagaaaggaagcctgatc
tctgctagccccagactggtggtggagggggatgttgctgctgcaggactggctaatgga
ggacttcccactacaacccttactatcccagcaggccttgaggtcgccagctcagtcgga
gaggcaggctcagaggtggtgaaggcagagctgggtgaggaggtggagctagtgaaggag
gtggggctagtggaggaggacctggtagctgtttcctacatggaagacgagctggacctg
aagacagtggaagacctcatcaccatcatagaggagaaggtggatgactctgtggaggct
ctagatgctgcagcagtggaggctgctctctctctctgtgaggaggctgtttctgccggc
cactccctctcaggcccctgggaggcccatgacttgaaggcctcagagcctgggcccacg
gttcagtctgaccccacacaggggcttcagggcggggttggggcgggagctaaccctggg
ggcctggagccagagacagagagtggaaggggggaagccaaggaggggaaggactgtgag
ggattagaaacagtggggacagacgttgctccttctgttgccgctgacgacagcctggca
ggaagtgaggtcacagaggagggagttctcgaggtggaaggaagcctgagcacagctgtg
aagactgagaatgaggagtggacccagccggaaccaaacacaccctgcctagactcagaa
gacagctctggatcagggaaagagtccaaggaagtgaaggatgaggatggagggagcgac
ggggatcctgatgaaggaatggagatgaaggagtgtggagagggggagggggaggggccc
tacctatcagaagtagaaccggcagccagtgagagcgaggatggctatggcccctcctcc
caacgctacaccacagctgattcactagccagcagccccgcctcttctcagttttcgata
tgtggggaggatcaggaggccgttcaggctcagaagatctggaagaaagccatcatgctg
gtgtggagagcagcagccaatcacaggtacgccagtgtgttcctccagtctgtgtctgat
gacatcgcccctggttaccacagcattgtacacagacccatggacctgtcggccatcaag
aagagcatcgaggcgggtcagatccgtacgacagcggagttccagcgtgacatcatgctg
atgttccagaacgcggtgatgtacaacagctctgaccacgatgtgttccacatggccctg
gagatgcagagggacgttctagaacacgtgcagcagttcctggccactcagctcatcatg
cagacctcggagtcctccatctccaccaagagcctcagaggccgcgaggggggccgcaag
ccaggggagccagtggagaaggacagtgtcccaatggcttctcccgctttccttctctct
ctctttgacgggggcaccagagggcgccgctgtgctattgaagcagacatgaagatgaag
aaataa
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