Coregonus clupeaformis (lake whitefish): 121539853
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Entry
121539853 CDS
T08357
Name
(RefSeq) PH and SEC7 domain-containing protein 2-like isoform X1
KO
K12494
PH and SEC7 domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121539853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121539853
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121539853
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
121539853
NCBI-ProteinID:
XP_041704444
LinkDB
All DBs
Position
3:complement(7153082..7187447)
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AA seq
1042 aa
AA seq
DB search
MDGQRYKTTRTCGAELVFQATFDSTHFVDGLSSPLAPDDSPPQPGTMTQEGQGHPQTEPP
TPPDSQGETPAHPAEESATDQGLEGRGLEVKVEVIEGTNEEEGEGSATVEGEVHREREGE
ESGKGEGDEEGEGVEQVMQEEGEVHEERESMAETSDEEDGVGDERIDAEDGQPDGEIERE
EEGEERKEEVKVNKERDNMNTEATEEAEPTCEPSCEEEEEGEEEEEEEGGKEEEELPPPP
PPEDQEEDQDLPDPPQSLDIVRLENGIGPENGIEGHEEEDDEEDEDVGEGGGLVEVIQEH
LDTFSSTFECSVELADTEVEEEEEEEEGEGRGNQDSFSSVFERIVEHVVAIEREEEEDEE
EGEGEREKNTVDNKDGFSSTFERIVESALLRGGTCYSSLDSLDVLSLTDETDSCVSFEAP
LTPLIQQRSFLQSPEPLELELATVMEQEGSEAGTEAQQGEPEAGESAAGPWPGPGGSPLR
TTITGTRSEFVLSQPGRWAIHNGFHTDTQGGAEGSGAIPNSMSDANVTDVLSDSESELGG
LEQLERGSTETLANGCRADCDAAKRLAKRLFYLEGFRRCDVARHLGKNNEFSQLVAAEYL
SFFDFSGLSLDKALRNFLKAFPLMGETQERERILVHFSKRFCVCNPTALAPEGKDRSKRN
DDDDEEDDDGAHTLTCALMLLNTDLHGHNIGKKMSCQQFISNLDGLNDGKDFPKDLLKVL
YSSIKNEKLEWAIEEEEFRKSLSELVEEQCEGGGKRGVARVTDGNNPFIAIPILPNAVTY
KHGVLTRKSHADMDGKRTPRGRRGWKKFYAVLKGMILYLQKDEYKADAELCEGDLKNAVR
IHHALATRATDYSKRPNVLKLKTSDWRVFLLQAPSEEEMMSWIFRINLVAALFSAPAFPA
AIGSMKTFCRPLLPSSSTRLSQEDQLQSHEGKLKQMSVEVEEHRKSPPSPSPKSREWEEY
RIKEHYLIYEKSRYETYINLLQAKMRAETDDLEKIEASVMSGIGEGRGGREGYLRKTQSS
PSISQHGLNSRASGRTGPGQQS
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggatgggcagagatacaaaacaacccgaacctgcggtgcagaactggtttttcaggct
acctttgattcaacgcattttgttgacggtctgtcctcccccctggccccagacgactcc
cccccacaaccaggcaccatgacccaggaggggcaaggacacccccagactgaaccccct
acacccccagacagccagggggagaccccagcccaccctgcagaggagtcagccacagac
caagggctggaggggcgaggtctggaggtcaaggtagaggtgatagaggggaccaatgag
gaggaaggggagggaagtgctacggtagaaggggaagtacacagagaaagagaaggtgag
gaaagtggaaagggagagggtgatgaggaaggtgagggagtggaacaagtgatgcaggaa
gaaggagaggtgcatgaagagagagagagtatggcagagacaagtgatgaagaagatgga
gtgggggatgagaggatagatgctgaggatggacagccagatggagagatagagagagag
gaggagggggaagaaaggaaggaggaggtgaaggtgaacaaggagagggataacatgaac
acagaggccacagaggaggcagaaccaacctgcgagcccagctgtgaggaggaggaggag
ggggaggaggaggaggaggaggaggggggtaaggaggaggaggagttaccgccaccacca
ccacctgaggaccaggaagaggaccaggacttaccagacccaccacagtctctggacata
gtcaggctggagaacgggataggacctgagaacggaatcgaagggcatgaagaggaggat
gatgaagaggatgaagatgtgggagaaggaggaggcttagtagaggtcatccaggaacac
ctggacacgttcagctccacctttgagtgttccgtagagctggcggacacagaggtggag
gaagaggaggaggaggaggaaggggaggggagggggaaccaggacagtttcagctctgtg
tttgaacgcatcgtggagcacgttgtggccatagagagggaggaagaggaagatgaggaa
gagggggagggagagagggagaagaacacggtggacaacaaggacggcttcagctcgacg
tttgagcgtatcgttgagtctgcgcttctccgcggggggacgtgctacagtagtttggac
tctctggatgtcctgtcactcacagacgagacagacagctgcgtcagcttcgaggctccg
ctcacccccctcatccagcagaggtccttcctccagagccctgagcctctggagctagaa
ctagctactgtcatggagcaggaggggagcgaggctggaaccgaggcccagcaaggagag
cctgaggctggggagagtgctgcagggccatggcctggacctggaggaagcccactaagg
accaccatcaccgggaccaggtcagagtttgtactgagccagcctggccggtgggccatc
cataatgggtttcatacagacacccaggggggagcggagggctctggagccatacccaac
tcaatgagtgatgccaacgtcacggacgtgctgtcggactcagagtcggagctgggcggt
ctggagcagctggagagaggcagcacggaaaccctggccaatggttgccgtgccgactgc
gacgccgccaaacgcctggccaagcgtctgttctacctggagggcttcagacgctgtgac
gtggcacgccacctgggcaagaataatgagttcagccagctggtggcggcagagtacctc
agcttctttgacttctctggcctgtcattggacaaggccctgaggaacttcctgaaagcc
tttcctctgatgggtgagacccaggagagagagaggatcctggtccacttctctaaaagg
ttctgtgtctgcaaccccacagccctcgcccccgaaggcaaggacagatccaaacggaat
gatgatgatgatgaagaagatgatgacggcgcccatacgttaacctgcgccctgatgctg
ctcaacactgatctacatggacacaacattgggaagaagatgtcttgccagcagttcatc
agtaatctggacggcctaaacgatggcaaagacttccctaaagacctattaaaggtgctg
tatagttcaataaagaacgagaagcttgaatgggcaattgaggaagaggagttcaggaag
agtctatcggagctggtggaggagcagtgtgagggaggggggaagaggggggttgccagg
gtaacggatggcaataaccctttcatcgccatccccatcctacccaacgccgtcacctat
aaacatggtgtcctgacccgcaagagccacgcagacatggacggcaaacgcaccccacga
ggacggcgaggctggaagaagttctatgcggttctaaaggggatgatcctttatctacag
aaggatgagtataaggctgatgcagagctgtgtgagggggacctgaagaacgctgtgcgt
atccaccatgcgttagccacccgcgctacagactacagcaaaagacccaacgtcctcaaa
ctaaagacctctgactggagggtgttcctgctgcaggcaccgagtgaggaggagatgatg
tcgtggatattccgtattaacctggtagcagctctattctccgctccggccttccctgct
gccatcggctccatgaagacgttctgtagacctctactgccctcctcctccacccggcta
agccaggaggatcagctgcagtctcacgaggggaagctgaagcagatgagtgtggaggtg
gaggagcacaggaagagcccgccctcgccttctcccaagagcagagagtgggaggagtac
cgaatcaaagagcactacctcatatatgagaagagtcggtacgagacgtacatcaacctg
ctccaggccaagatgagggcagagacagatgacctggagaagatagaggctagcgtgatg
agcgggatcggggagggccgaggagggcgcgagggctacctccggaagacccagtcctct
ccttccatcagccagcacggtctcaacagcagggcttctggacgcactggcccgggccag
cagagttga
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