Coregonus clupeaformis (lake whitefish): 121539873
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Entry
121539873 CDS
T08357
Name
(RefSeq) beta-sarcoglycan-like
KO
K12566
beta-sarcoglycan
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121539873
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Gene cluster
GFIT
Motif
Pfam:
Sarcoglycan_1
PDDEXK_5
DUF5316
Motif
Other DBs
NCBI-GeneID:
121539873
NCBI-ProteinID:
XP_041704455
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All DBs
Position
26:7973094..7976162
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AA seq
313 aa
AA seq
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MASEQESSNGPVKRSMREKAIERRATNKEHNSNFKAGYVPIEEERLHKTGLRGRKGNMAV
CIIVLLFLLALINIIITLVIWTVIRIGPSGCDSMEFHESGLLRFKQKADMGVVHPLHKST
VGGRKDQDLVITGNNNPVVFQQGSTKLSVEKEKTSITSDMGISFTDPRTQNTFFSTDFEN
HEFHLPKGVKVLSVKKASTERITSNASSDLSIKGDSKAIIRGNEGVFIMGKTVEFRMGGD
IELRAENSIVLNGSVMVSVTRMPNSSVGANVYFDEGLLRYKLCMCADGTLFRVQVKYQNM
GCQTSDNPCGTAH
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgagcaggagagttctaatgggcctgtgaagaggtccatgagggagaaggcc
atcgaacggcgggccaccaacaaggagcacaacagcaacttcaaggcaggctatgtgccc
attgaggaggagcgcctgcacaagacaggcctgagaggacgcaagggcaacatggctgtc
tgcatcatagtcctgctcttcttgctggctctcatcaacatcattatcactctagtgata
tggacagtgatccgcatcgggcccagtggttgtgacagtatggagttccatgagagtggg
ctgctgcgcttcaagcagaaggcagacatgggtgtggtccacccactacacaagagcact
gtggggggcaggaaggaccaggacctggttatcaccggcaacaacaacccggtggtgttc
cagcagggctccactaagctcagtgttgagaaagagaagacgtccatcaccagtgacatg
ggcatatccttcactgacccccgcactcagaacacattcttcagcactgactttgaaaac
cacgagttccacctgcccaaaggagtcaaagtactcagtgtgaagaaagcctccacagaa
aggatcaccagcaacgcttcctctgacttgtccatcaaaggggacagcaaggccatcatc
cgcggcaatgagggggtcttcatcatgggcaagaccgtggagttcaggatgggaggggac
atcgagctcagagctgagaacagtattgttctgaatgggtcggtgatggtgagcgtcact
cgcatgcctaactcctcagtgggagccaacgtgtatttcgacgaaggtctgttgaggtac
aagctgtgtatgtgtgcagacggcactctgttccgtgtccaggtgaagtatcagaacatg
ggctgccagacctcagacaacccctgtggaacggcccactaa
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