Coregonus clupeaformis (lake whitefish): 121539880
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Entry
121539880 CDS
T08357
Name
(RefSeq) transcription factor AP-1-like
KO
K04448
transcription factor AP-1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04012
ErbB signaling pathway
cclu04137
Mitophagy - animal
cclu04210
Apoptosis
cclu04310
Wnt signaling pathway
cclu04510
Focal adhesion
cclu04530
Tight junction
cclu04620
Toll-like receptor signaling pathway
cclu04621
NOD-like receptor signaling pathway
cclu04625
C-type lectin receptor signaling pathway
cclu04912
GnRH signaling pathway
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121539880
04012 ErbB signaling pathway
121539880
04310 Wnt signaling pathway
121539880
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121539880
09143 Cell growth and death
04210 Apoptosis
121539880
09144 Cellular community - eukaryotes
04510 Focal adhesion
121539880
04530 Tight junction
121539880
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121539880
04621 NOD-like receptor signaling pathway
121539880
04625 C-type lectin receptor signaling pathway
121539880
09152 Endocrine system
04912 GnRH signaling pathway
121539880
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121539880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121539880
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, Jun
121539880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Jun
bZIP_1
bZIP_Maf
bZIP_2
PspA_IM30
ZapB
DUF3450
FlaC_arch
TEX13
Motif
Other DBs
NCBI-GeneID:
121539880
NCBI-ProteinID:
XP_041704463
LinkDB
All DBs
Position
26:32885199..32886615
Genome browser
AA seq
328 aa
AA seq
DB search
MSRKMETTFYEDSLNSFSQHEKPGYGCNPKALKHSMTLNLADPTSTLKPHLRAKASDILT
SPDVQLLKLASPELERLIIQSSNGLITTTPTPTQFLCPRNVTDEQEGFAEGFVRALAELH
HQHVLPNAPGVPVTSAGQTSINNPTILPPVSALTGSTVYNNNITMRSESPVYEDLNTFTP
AITTNSAPGYTTSAPAMSFPSAPPQLPVYGQQSHPHPRLTALKEEPQTVPEMPGETPPVS
PIDMENQERIKAERKRMRNRVAASKCRKRKLERISRLEDKVKNLKTQNSDLASTANMLRE
QVAQLKQKVMNHVNSGCQLMLTQQLQTF
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtctagaaaaatggaaactaccttctacgaggactcgctcaactctttctcccagcat
gagaaaccgggctacggatgcaaccccaaagcactgaaacacagcatgacactgaacctg
gccgacccaaccagcacactcaaacctcacctccgggctaaagccagcgacatcctcacc
tctccggacgtgcagctcctcaaactggcctccccagagttggagcggctcatcatccag
tccagcaacggcctgatcaccaccacacctaccccgacgcagttcctctgcccgaggaac
gtaactgatgagcaggagggctttgccgagggatttgttagagctctggcggagctccat
catcaacatgtcttgcccaatgcacccggggtcccagtcacctccgctgggcagacaagc
atcaacaacccgacaatactcccacctgtttccgccttgaccgggagcactgtttataac
aacaacataaccatgcgctctgagtcgcctgtctacgaagacctgaacacgttcaccccg
gctatcaccaccaactcagccccgggttacaccacctcagccccagctatgagctttccc
tctgccccgccacagctccctgtctatgggcagcagtctcacccccatcccaggctcact
gccctgaaagaggagccccagaccgtgcctgagatgcccggggagacccctcctgtctcc
cccatcgatatggagaatcaggagaggatcaaagccgagaggaagcgcatgaggaaccgt
gtcgccgcctccaagtgcaggaagcggaagctggagcgcatctcccgactggaggacaag
gtgaagaacctgaagactcagaactccgacctagcttccacagcaaatatgctgagggaa
caggtcgcccagctcaaacagaaggtgatgaaccatgtcaacagcggctgtcaactcatg
ctgacgcagcagctccagaccttctga
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