Coregonus clupeaformis (lake whitefish): 121539934
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Entry
121539934 CDS
T08357
Name
(RefSeq) protein mago nashi homolog
KO
K12877
protein mago nashi
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
cclu03015
mRNA surveillance pathway
cclu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121539934
09122 Translation
03013 Nucleocytoplasmic transport
121539934
03015 mRNA surveillance pathway
121539934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121539934
03041 Spliceosome [BR:
cclu03041
]
121539934
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121539934
Spliceosome [BR:
cclu03041
]
Complex C
Other components
EJC/TREX
121539934
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mago_nashi
GlyRS_ins_1
Motif
Other DBs
NCBI-GeneID:
121539934
NCBI-ProteinID:
XP_041704516
LinkDB
All DBs
Position
26
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AA seq
147 aa
AA seq
DB search
MSTSDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEE
LKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGL
RVFYYLVQDLKCLVFSLIGLHFKIKPI
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgagtgacttttatttgagatattatgtcgggcacaagggcaagtttggacac
gagttcttggaatttgagtttagacctgacggtaagctgaggtacgcgaacaacagcaac
tacaagaatgatgtcatgatcagaaaagaggcgtacgtacacaaaagtgtgatggaggaa
ctgaagaggatcatagacgacagtgagatcaccaaggaagacgatgcactgtggccaccc
ccagacagagtgggcagacaggagctggagatcgtcattggggatgagcacatttccttc
acaacttccaagattggttccttgattgatgtcaaccagtcaaaggacccagaaggcctc
cgcgtgttctactacctggtccaggatctgaaatgtcttgtcttcagtctcatcggacta
cacttcaagatcaagcccatctaa
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