KEGG   Coregonus clupeaformis (lake whitefish): 121539934
Entry
121539934         CDS       T08357                                 
Name
(RefSeq) protein mago nashi homolog
  KO
K12877  protein mago nashi
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013  Nucleocytoplasmic transport
cclu03015  mRNA surveillance pathway
cclu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121539934
  09122 Translation
   03013 Nucleocytoplasmic transport
    121539934
   03015 mRNA surveillance pathway
    121539934
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    121539934
   03041 Spliceosome [BR:cclu03041]
    121539934
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     121539934
Spliceosome [BR:cclu03041]
 Complex C
  Other components
   EJC/TREX
    121539934
SSDB
Motif
Pfam: Mago_nashi GlyRS_ins_1
Other DBs
NCBI-GeneID: 121539934
NCBI-ProteinID: XP_041704516
LinkDB
Position
26
AA seq 147 aa
MSTSDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEE
LKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGL
RVFYYLVQDLKCLVFSLIGLHFKIKPI
NT seq 444 nt   +upstreamnt  +downstreamnt
atgtcaacgagtgacttttatttgagatattatgtcgggcacaagggcaagtttggacac
gagttcttggaatttgagtttagacctgacggtaagctgaggtacgcgaacaacagcaac
tacaagaatgatgtcatgatcagaaaagaggcgtacgtacacaaaagtgtgatggaggaa
ctgaagaggatcatagacgacagtgagatcaccaaggaagacgatgcactgtggccaccc
ccagacagagtgggcagacaggagctggagatcgtcattggggatgagcacatttccttc
acaacttccaagattggttccttgattgatgtcaaccagtcaaaggacccagaaggcctc
cgcgtgttctactacctggtccaggatctgaaatgtcttgtcttcagtctcatcggacta
cacttcaagatcaagcccatctaa

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