Coregonus clupeaformis (lake whitefish): 121539958
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Entry
121539958 CDS
T08357
Name
(RefSeq) hyaluronidase-5-like
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00531
Glycosaminoglycan degradation
cclu01100
Metabolic pathways
cclu04142
Lysosome
Module
cclu_M00076
Dermatan sulfate degradation
cclu_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
121539958
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121539958
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
cclu02042
]
121539958
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121539958
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
121539958
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
121539958
Bacterial toxins [BR:
cclu02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
121539958
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Enzymes
121539958
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Enzymes
121539958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
TC1
Motif
Other DBs
NCBI-GeneID:
121539958
NCBI-ProteinID:
XP_041704542
LinkDB
All DBs
Position
26:complement(38607951..38610383)
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AA seq
488 aa
AA seq
DB search
MNLYMVSFRGLHFMECFFLMTLLGINWALPKTDPPVDPNYPFLFMWNSPTELCETRFGVG
LNLSHFQLVSSTLKSATNQSISIFYSDRFGLFPYVDEDTGEMYDEGLPQLIDFQEHHEQA
EDDIEYYIPEDQPGLAILDFEEWRPQWVRNWGSKDIYRDLSIETVKTKTPNLSDDEAEDR
AKIVFERAAKRYFLRSLLVGKRLRPNRLWGYYLYPDCYNYDYNQDMSDYSGSCPELELER
NDDLMWLWKESTALYPSIYLELILRDSYQARLFVRHRIQEAMRVSMLPNQSYAIPVYAYI
RPVFKDSGDDYMSEYDLVNTIGEAAALGAAGVISWGDMNVTDSEDSCFAARRHLEKIMNP
YILNVSMASRLCSEALCQANGRCIRKHWDRDDYLHLDPYTFQIKRYRTGDLAVKGEMSQY
EIDWFADRFDCLCYSDEPCQSSSTLNSFPNFVQSNGTPQYFQPFLILASIVYSTHLCFVM
MWNITGGW
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgtacatggtctcctttcgtggactgcacttcatggaatgtttttttctcatg
actctactgggcattaactgggcactacctaaaacagacccacctgtagatcctaactac
cccttccttttcatgtggaactctcccacagaactctgcgagaccagatttggtgtgggt
ctcaacctctcccacttccagttagtgagcagcactttgaagtccgccaccaaccaaagc
atctccattttctactctgaccgtttcggcctcttcccatacgtggacgaggacacaggg
gaaatgtatgatgaaggccttccacagctgatcgatttccaggaacaccatgagcaggcc
gaagatgacattgaatactacatccccgaagaccaaccgggcctcgccatccttgacttt
gaggaatggcgaccacagtgggtccggaactggggcagcaaggacatctatcgagatctc
tcaattgagactgtgaaaaccaagaccccaaacttatccgacgacgaggccgaagacaga
gccaagatagtgtttgagcgagcagcaaagcgatactttctccgatctctcttggttggg
aagaggctaagacccaacaggctttggggatactatctgtacccagactgttacaactac
gactacaaccaggatatgagtgattattctgggagttgtcctgagcttgagctagagagg
aacgatgacttgatgtggctatggaaggagtccactgctctctacccatccatctatctg
gagctgatcctgagagattcctaccaagcccgcctgtttgtccgccaccgcattcaggaa
gctatgagagtatccatgctccccaaccaaagttacgccattcctgtctacgcctacatc
cgcccagttttcaaagatagtggtgatgactacatgtcagagtatgacctggtgaacacc
attggggaggcagctgccctgggagcggctggggtgatctcctggggggacatgaacgtc
actgactcagaggactcctgcttcgctgccagacgccacctggagaagatcatgaatccg
tacatcttgaatgtttccatggcatcgcggctgtgtagcgaggctttgtgtcaggcgaat
ggccgttgcataagaaagcactgggacagagacgactacctacacctcgacccatacacc
ttccagatcaagagatatagaacaggcgatctggcagtgaagggtgaaatgtcccaatat
gagattgactggtttgctgacagatttgactgtttgtgctactctgacgaaccatgtcag
tcctccagtactctaaactccttccctaactttgtccaaagcaatggaactccccaatac
ttccaaccgtttctcattctggcttctattgtctacagtacacacctttgttttgtaatg
atgtggaacatcacaggaggctggtga
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