KEGG   Coregonus clupeaformis (lake whitefish): 121540023
Entry
121540023         CDS       T08357                                 
Name
(RefSeq) ras-related protein Rab-11A-like
  KO
K07904  Ras-related protein Rab-11A
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121540023
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121540023
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121540023
   04031 GTP-binding proteins [BR:cclu04031]
    121540023
Membrane trafficking [BR:cclu04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    121540023
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   121540023
  Exosomal proteins of colorectal cancer cells
   121540023
GTP-binding proteins [BR:cclu04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    121540023
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU AAA_22 RsgA_GTPase PduV-EutP YtzH ABC_tran AAA_16 TniB DUF3289 AAA_24 FAD-SLDH SRPRB AAA_14 NTPase_1 AAA_7 AAA_21
Other DBs
NCBI-GeneID: 121540023
NCBI-ProteinID: XP_041704603
LinkDB
Position
26:45746477..45773634
AA seq 216 aa
MGNRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTV
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVARWLKELRDHADSNIVIM
LVGNKSDLRHLRAVPTDGARAFAEKNGLSFLETSALDSTNVETSFQTILTEIYRIVSQKQ
MSDRQDNNMSPSNNVVNIQVQPTENKPKMQCCQSIT
NT seq 651 nt   +upstreamnt  +downstreamnt
atggggaacagagatgacgagtacgattacttgtttaaagtggtgttgatcggagactct
ggtgtggggaagagtaacctattgtctcgtttcacccggaatgagtttaacctggagagt
aagagcaccatcggcgtggagtttgccacccgcagtatccaggtggacggcaagacggtg
aaggcccagatctgggacacggctggtcaggagagataccgggctataacctcagcatat
taccgtggggcggtgggggctctgctggtctatgacatcgccaagcacctgacctatgaa
aacgtggcgcgttggctgaaggagctgagagaccatgcagacagcaacatcgtcatcatg
ctggtcggcaacaagagtgacctgcgccacctcagggctgtgcccaccgacggggcgcgg
gcattcgcagagaagaacggcttgtctttcctggagacttccgccctggactctactaac
gtggagacatccttccagaccattctgactgaaatctatcgcatcgtgtctcagaaacag
atgtcggaccggcaagacaacaacatgtcgcctagcaacaacgtggtcaacatccaggtg
cagccgacggagaataaaccaaagatgcagtgttgtcagagcatcacctga

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