KEGG   Coregonus clupeaformis (lake whitefish): 121540028
Entry
121540028         CDS       T08357                                 
Symbol
stx5a
Name
(RefSeq) syntaxin-5a
  KO
K08490  syntaxin 5
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    121540028 (stx5a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121540028 (stx5a)
Membrane trafficking [BR:cclu04131]
 SNARE
  Syntaxin (Qa)
   Stx-cisGolgi
    121540028 (stx5a)
SSDB
Motif
Pfam: SNARE Syntaxin-5_N Use1 Apolipoprotein DUF16 HrpB7 MCPsignal DUF5063
Other DBs
NCBI-GeneID: 121540028
NCBI-ProteinID: XP_041704611
LinkDB
Position
3:6885186..6889143
AA seq 301 aa
MTCRDRTNEFQSACKSLQSRQNGVQPTKQALSALKQRSDFTLMAKRIGKDLSNTFAKLEK
LTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDLIRSRGAPSGRHIQTHSNT
IVVSLQSKLASMSNDFKSVLEVRTENLKQQKSRREQFSQPPVSSSPLLANNFKSSVLMQD
ESRSMGGEVAIDMDNQSNPLQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMV
KEQEETVQRIDANVEDTQLNVDMAHTEILKYFQSVSSNRWLMVKIFLVLIVFFIVFVVFL
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacgtgcagggatcgaaccaacgagttccagtcagcctgcaaatccctacagagcaga
cagaatggcgttcagcccaccaagcaagccctcagtgctctcaagcaacgcagtgacttc
accctcatggccaagagaataggaaaagacttgagtaatacgtttgctaaactagagaaa
ctcactatattggctaaaagaaaatctctatttgatgacaaggcagtggagattgaagag
ttaacctacatcatcaagcaggacattaacagcttgaacaagcagatagcccaactgcag
gatctgatccgttcacgtggagcgcccagcggcagacacatccagacccattccaacacc
atcgttgtctccctgcagtccaaactggcgtctatgtccaatgacttcaagtcggttcta
gaagtaagaacagagaacctgaagcagcagaagagcaggagagaacagttctctcagcct
cctgtctcttcttctcctctcctcgccaacaacttcaagagttcagtgttgatgcaggat
gagtccaggagtatggggggtgaggtggccatcgacatggacaaccagtctaaccctcta
cagctccagctcattgatgagcaggactcgtacatccagagccgtgcagacaccatgcag
aacattgagagcaccatcgtagagctgggctccatcttccagcagctggctcacatggtg
aaggagcaggaagagacagtacagaggattgatgctaacgtggaggacactcagctcaac
gtggacatggctcacacggagatcctcaagtatttccagtctgtgtcctccaaccgctgg
ctcatggtcaagatcttcctcgtcctcatcgtgttcttcatcgtcttcgtggtcttcctc
gcctga

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