Coregonus clupeaformis (lake whitefish): 121540037
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Entry
121540037 CDS
T08357
Symbol
vegfba
Name
(RefSeq) vascular endothelial growth factor A
KO
K05448
vascular endothelial growth factor A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04020
Calcium signaling pathway
cclu04370
VEGF signaling pathway
cclu04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121540037 (vegfba)
04370 VEGF signaling pathway
121540037 (vegfba)
04020 Calcium signaling pathway
121540037 (vegfba)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121540037 (vegfba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121540037 (vegfba)
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121540037 (vegfba)
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Growth factors (RTK binding)
121540037 (vegfba)
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Growth factors/receptors
121540037 (vegfba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
VEGF_C
Motif
Other DBs
NCBI-GeneID:
121540037
NCBI-ProteinID:
XP_041704619
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All DBs
Position
3:6865558..6880551
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AA seq
237 aa
AA seq
DB search
MGIMLQVILGMFQFLLLSRFPTSHAKLAHWRPADTTPKSREVRRWLEVYSRSVCEPRDTL
VEVWQELPGETHHLFMPSCVSVRRCGGCCSDEALECVPSLTQTITMELMKTSFMKHELIE
LDFVEHSQCECRLKEDLRSAPTRPAKPLRKKKRERGKSKRKKSGAIKTTPSSPPTIPSPL
PTTLSSLPGPRCTPCPGRKWTLDLQSCRCRCNVTAKSCSQKGRRLNQHLCRCEAIRR
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggggattatgcttcaagttattctaggaatgtttcagttcctcttgctctccagattc
cccacgtcccatgccaagctagcccactggagacctgcagacaccaccccaaaatccaga
gaagtgcgtcggtggttggaggtgtactctcgtagtgtctgtgagcccagggataccctg
gtggaggtgtggcaggagttgccgggagagacgcatcacctcttcatgccctcctgtgtg
tcggtccgccgctgtggcggatgctgctccgacgaggcactggagtgtgtgccctcactc
acacaaactatcaccatggagctaatgaagacctcctttatgaagcatgagctcatcgag
ctggacttcgttgagcacagccagtgtgagtgcagactaaaagaggatcttcgatcagcc
cctaccaggcctgcaaagcctctgaggaaaaagaaacgggagagaggaaaatccaaaaga
aagaaaagtggagctatcaaaaccacaccctcctctccccccactatcccctctcctctc
cctaccaccctgtcttccttgccaggccctcgatgtaccccctgtcctgggaggaagtgg
acgctcgatttgcagtcttgtcggtgtcgctgcaacgtgaccgcaaagagctgcagtcag
aaagggaggagactcaaccagcacctctgcagatgtgaggccataaggcggtga
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