Coregonus clupeaformis (lake whitefish): 121540096
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Entry
121540096 CDS
T08357
Name
(RefSeq) plakophilin-3
KO
K28841
plakophilin 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04382
Cornified envelope formation
cclu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
121540096
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121540096
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Motif
Pfam:
Arm
ARM_ARMC5
KAP
ZER1-like_2nd
Atx10homo_assoc
WRM1_C
BAR1_C
ARM_GAC_2
Motif
Other DBs
NCBI-GeneID:
121540096
NCBI-ProteinID:
XP_045063577
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All DBs
Position
26
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AA seq
990 aa
AA seq
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MSFVAQDNVFLSALQPNSAVSTYAIPSEIQLGGNGGTLSDEMTRAKRVQQQVAMRLAEKT
STLPRQNGSASHYTSSEYGGSSTMKYQTFNPGFSSKSYVYTSSRPVMAPRVAQYSGGFSS
RSAVDLSGGQRVAMGSGGGGGGGGGGGGGGGAYQYHDNMSLSGGYQGEGGYQGGGGYQGE
GGYQGGGGYQGGGGYQGGGGYQGGGGYQGEGGLPGRRGLPGRRGLPGRRGIPGRRGLPGR
RGATREEGATREEGDTREKGATREEGDTREKGATREEGATRYHVGGGGAMRQQMTRAMSC
APGPDLETMSLRSVRLQNLPAQPSPVAAWVAADCSDGGSLVSDRDATFRRQQSVYSTVNG
GAYSSGTQMRQGGEDMMTVQQQHSFKGPAYRTISRINNRNNKMSMGSMSGASTLPSGGSS
YGGGGGGFVMSRASTLHSGGSNYGGGGGGFMMGQMSSGSQGNLMIMQQQRQATLPRTMSV
KSMHSVGKGMDIYDRQMDMTGSMGNLSGINSLDMPTAVRYLIEGDADLQVLGAAYIQHEC
YNNTEAKNEIHRYKGIPELVRLFNSENQEVARYATGATRNLIYENMDNKMALIEAGGIPQ
LIEALKENDDELRKNITGILWNLSSKDNLKEKLAKETLAELTEKILIPLSGSGDSEVIQQ
SPSEVDIFYNTTGCLRNLSSVNEKTRQKMRETNGLVDALVRYIQASLQDGKVEEKGVENS
VCVLRNLSYQLYSEIPPSALLRLEGPTRDQDTSRSEAIGCFTPQSKKVKNKMNQDLVTFT
EVARVPKGLEWLWHPQVVGLYNRVLQACDINSTTREAAAGALQNITAGDKRWAGVLSRVA
LEQERMLPVMLDKLRTNRDQELRSLTGFLRNLSRHAKDKNAMANKAVNNLVAKLPTDGQQ
KEPSSDVVVNICGALNNLVTCSSVAARDITFFDGLQKLVAIKNSHDSSPGKLKAAKAAAT
VLCNMFQYKKLHKDYKQKGFTRPDFADVTI
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgtggctcaagataatgtatttctgtctgctttgcagcccaattccgccgtc
agcacttacgcgatcccgtccgagatccagctcgggggtaatgggggcaccctgtcggat
gagatgacccgggccaagcgggtccagcagcaggttgcaatgcggctcgccgagaaaacc
tcgacgcttccccgacagaacggctcggcctcacactacacctcctcagaatacggcggt
tcttcaacgatgaagtaccagaccttcaacccagggttcagctccaagtcctacgtctac
acatcctccagacctgtcatggcacccagggtggctcagtactctggcggtttctcctcc
cgctctgcggtggatctgagtggtggtcagagagtcgcaatggggagtggaggaggagga
ggaggaggaggaggaggtggaggaggaggaggagcataccagtaccacgataacatgagt
ctgagcgggggctaccagggagaagggggataccagggaggagggggataccagggagaa
gggggctaccagggaggagggggataccagggaggagggggataccagggaggaggggga
taccagggaggagggggataccagggagaaggggggctaccagggaggagggggctacca
gggaggagggggctaccagggaggagggggataccagggagaagggggctaccagggagg
aggggggctaccagggaggagggggctaccagggaggagggggataccagggagaagggg
gctaccagggaggagggggataccagggagaagggggctaccagggaggagggggctacc
aggtaccatgttggaggaggaggggccatgaggcaacagatgacccgggcgatgagctgt
gctcccggcccagacctagagaccatgtccctgcgctccgtgaggctccagaacctgccc
gctcagccgtccccagtggcagcctgggtggctgcggactgcagtgatgggggcagcctg
gtctcggaccgcgacgccaccttcaggcgccagcagtctgtctacagcaccgtcaatgga
ggagcctacagctcagggacccagatgagacagggaggagaggatatgatgacggtacag
cagcagcattcctttaaagggccagcataccgcaccatcagcagaatcaacaacaggaac
aacaagatgtccatgggctccatgtccggggcttccaccctcccctcagggggaagcagc
tacggcggtggagggggaggcttcgtcatgtccagggcttccaccctccactctgggggg
agcaactacggcggtggagggggagggttcatgatgggccagatgtcgtctgggtctcag
ggaaatctgatgataatgcaacagcagagacaggccactctgcccaggacgatgtccgtc
aagagcatgcacagtgtcgggaagggcatggatatctacgacagacagatggacatgact
ggcagcatgggcaacctcagcgggatcaatagcctggacatgcctacggcggtgaggtac
ctgattgagggggatgctgacctgcaggttctgggagcagcttatatccaacacgagtgt
tacaacaacactgaggccaagaacgagatacaccgctataagggcatcccagagctggtg
aggctgttcaacagtgagaaccaggaggtggctcgctacgccacgggcgccaccaggaac
ctcatctacgagaacatggacaacaagatggccctcatcgaggcgggcgggatcccacaa
ctcatagaggctctgaaggagaatgacgacgagctacggaagaacatcacaggtattctg
tggaacctgtcatccaaagacaacctgaaggagaaactagccaaggagacgctagctgag
ctcacagagaagatcctgatcccactgtcaggcagcggagactctgaggtcatccagcag
agcccctccgaggttgacatcttctacaataccaccggatgtctcaggaacctgagctca
gtgaacgagaagaccagacagaagatgcgggagaccaacggtctggtcgatgccctggta
agatacatccaggcctcgctacaggacggcaaggtggaggaaaagggagtggagaactcg
gtgtgtgtcctgaggaacctctcctatcagctgtacagtgagatcccgccctcggccctg
ctacgtctggaaggaccaaccagagaccaggacaccagcaggagtgaagctattggttgc
ttcacccctcagagcaagaaagtaaaaaataagatgaaccaggacctggttacgttcacg
gaggtggcccgcgtacccaagggtctggagtggctgtggcacccccaggtggtggggctg
tataaccgcgtgctgcaggcctgtgacattaactccaccacccgcgaggctgcagccggg
gccctgcagaacatcacagctggagacaagagatgggccggggtgctgagtcgtgtggct
ctggagcaagagagaatgcttcctgtgatgttggacaaactgaggaccaatcgtgaccag
gagctgagatccctcaccggcttcctcagaaacctgtcacgtcacgccaaggacaagaac
gccatggcaaacaaggcagtgaacaacctggtggccaagctgcccactgacggccagcag
aaggagccgtccagcgacgtggtagtcaacatctgtggagcgttgaacaacctggtgacc
tgcagctccgtcgcagcccgggacatcactttctttgacgggctgcaaaaactggtggcc
atcaagaactcccacgacagcagccctgggaagctgaaagcagccaaagcagcagccaca
gtcctctgcaacatgttccagtacaagaagctgcacaaggactacaaacagaaagggttc
acacgaccagactttgcagacgtgacaatctaa
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