Coregonus clupeaformis (lake whitefish): 121540129
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Entry
121540129 CDS
T08357
Symbol
als2b
Name
(RefSeq) alsin isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121540129 (als2b)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
121540129 (als2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
MORN
RCC1_2
VPS9
PH
RhoGEF
Tudor_2
Motif
Other DBs
NCBI-GeneID:
121540129
NCBI-ProteinID:
XP_045063859
LinkDB
All DBs
Position
26:complement(50420733..50440284)
Genome browser
AA seq
1724 aa
AA seq
DB search
MHQHCHGQISVMESQRKSSGEEDSSGERGLLHTWKGYSYSVTPERVLLSRPVLQAALGTR
HGVLLVEGGQVYSLGELPWKQSQVSDVGPLKPILESALSGQRVVVVAAGSFHSGAVTEDG
GVHMWGENSSGQCGLSSLAVVPNPTPVAVLDPDTSTPQTIRVLDLACGEQHSLALSAQHE
VWAWGSGCQLGLVTTIFPVWKPQKVEHLAGRHVLQVACGAFHSLALVRCLPPQEARRPLP
DKCGQCNQLLYTMTDKEDHVIISDSHYCPLGVELLAEGEARLGPGGSPPPGLQSSPSEPL
LSSHTTVSASAPGPHPSITEHTDYERGRTVAQNGEVLTTTDCDISVAGTDSGLTVGGVGG
AGSQNSPYPDDQAVKEYLKKLSDTSLAEETAKMTIAGASFQPPADSLDLLTSNLIPGVMP
VTTTSSALNSLVSSCASAVGERVVSTYEALSLKKMINYYYPGVGGVAGVPGRVQGGFPGG
PAEERVRLEESMQGKKSCSTGDIREEEAEGLSRRLSLPGLLSQVSPRLLRRASRPRVRAV
PLTPVGGLPEAGELLPSLQTEVWSWGRGEDGQLGHGDNLPRLQPLCIKCLSSKEVVLVAA
GAHHSLALTAQSQVFSWGSNSSGQLGHMESPTTIPRLAKLSEGIRVWDVGAGVQHTLFLA
DGDCYQPILYYSGQQVREGAQDAPQDQTGGYSYTQQPVLLPFCMNLGYVSGVFAGGQSCV
ALADRNVMGFIASLHELAAAERKFYCKLSSVKNHILRPLLDLGENYCCRQSTTGQRPWVR
ESLSTALGPSSTVLLQSLARCYSRLCHLTGQHSASLTANLRRRREVKSLVMLEHASIFLD
TYNEYCCSVGNFLVMGGFQALAKPSLDFFGKCPELLQRLAESSEENIPLSELLVALFYLP
MRHLHEYGRLLLKLGTCFEVSSVDYQKLQDGCSKFEALALHLKRKRKEAEYTYHFWKSFP
GKMTVSGLDSLRKPHRRLICESSNKALTLQNSGRFSVNWFILFNDALVHAQGVVPYKSLF
STHHVFPLATLWVEPIPEENTGLYGLKVISPEETFTLLACSSMEKAKWLRSINQAVDQAM
SGAGQSGSGAGQRAEPPISRTASYTFYKDSRLKEATYEGRWLAGKPNGRGIVKWPDGRIY
TGTFKNGLEDGFGDYVIPSKTLNKNDHYQGHWKEGKMHGIGTFKYATGELYEGSFQDNMR
HGHGMLRSGTLNSSSPSVFIGQWVHDKKTGYGVFDDITRGEKYMGIWQDDQRQGTGVIVT
QFGLYYEGAFNNNKMQGTGVLLSEDDTTYEGEFSEDWTLNGKGVLTMANGDYFEGSFTGE
WGSGLKVTGSYFKPNLYHSDGDKGRAVKLGRLAVRPEEKWRAVFEECWRRLGCEAPGQGE
NQRAWENIAVALTTSRRQHRDSPELNLSRTHNRTLESLEFIPQQHVGPFTMEKYDSIRHY
LIKACDTPLHPLGRLMETLVAVYRMTYVGVGANRRLLLQAVNEIMSYLARIFQLVRFLFP
DLPEEGGAIPEPSSDSQDKKDSNCTDNQLESPKPGRVVSSSALLLPVLLPRLYPPLFTLY
ALEKEREDDVYWECVLRLNKQPDMALLAFLGVQHKFWPVSVPVLGEKTEVVSSTKDACFA
SATETLQQISTTFTPSDKLQVIQLTFEEITKEVMSSLKDNFLWSMDDLFPVFLYVVLRAR
IRNLGSEVSLIEDLMDPCVQHGEHGIMFTTLKACYYQIQHEKTT
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagcattgccatggacaaatctcagtgatggagtcccagaggaaaagctctggt
gaggaggacagttcaggggagcgaggtttgctccacacctggaagggctactcctatagt
gttaccccagagagagtgctcctgtccaggcctgtgctgcaggctgccctggggacacgc
catggggttctactggtggagggcgggcaggtgtacagcctcggtgagttgccatggaaa
cagagccaggtgtcggatgtgggccccctgaagcccatcctagagagcgctctcagcggc
cagcgcgtggtcgtcgtggcagcaggcagcttccacagcggggcggtgactgaggatggc
ggggtccacatgtggggggagaactcctccggccagtgtggcctgtccagcctcgccgta
gtccccaaccctactccagtggctgtcctggaccccgacactagcacccctcagaccatc
cgggtcctggatctggcctgcggggagcagcactcccttgctctctctgcccagcacgag
gtgtgggcctggggcagcggctgccagctgggcctggtcaccaccatattccccgtgtgg
aagccccagaaggtggagcacctggcgggcagacacgtcctccaggtggcctgtggggcc
ttccacagcctggccttggtgcgttgcctaccccctcaggaggcccggcggcccctgcca
gacaagtgtggccagtgcaaccagctactctacaccatgacggacaaggaggaccacgtc
attatctcagatagtcattactgccccctaggggtggagctgctggctgagggagaggcc
aggctggggcctggagggtcccctccaccagggctccagagctccccttcagagcccctc
ctctcctctcataccactgtctcggcctcagcacctggtccccatccctccataacagaa
catacagactatgagagggggaggacagtggcacaaaatggggaagtcttaaccaccaca
gactgtgacatctctgttgctgggacagactctggtctaactgttggaggtgtggggggt
gcagggtctcagaactccccctaccctgatgatcaggcagtgaaagaatatctgaagaaa
ctgtctgacacctctttggctgaggagactgccaagatgaccatagcaggagcaagtttt
cagcccccagcagatagccttgacctcctgacctctaacctcatccccggtgtcatgccg
gtgacgaccaccagctctgccctcaacagcctggtctcatcctgtgcctctgccgtgggc
gagagagtggtctccacctacgaggctctgtccctgaagaaaatgattaactactactac
cctggggttgggggtgtagcaggagtacccggtagggtgcaaggggggtttccagggggt
cctgcggaggagcgggtgcgtctggaggagtccatgcaggggaagaagagctgcagcacg
ggggatatccgcgaggaggaggccgagggcctgagtcgacgtctctctctgcctggactc
ctctctcaggtgtcccccaggttgctgcggagggccagccggcccagggtgcgagcggtg
cccctcacccctgttggagggctcccagaagcaggggagctgctcccctccctgcagact
gaggtgtggagctgggggcggggcgaggatggccagctaggccatggggacaacctcccc
aggctgcagccactgtgcatcaaatgtctgagcagtaaggaggtggtgcttgtggctgct
ggggcacatcactccctggccctgactgcacagtcccaggtcttctcctggggtagtaac
agctctggccagctaggacacatggagtctcctactactatccctcgccttgccaagctg
tctgaggggatccgtgtatgggacgtgggtgcgggggtgcagcacaccctcttcctggcc
gacggggactgttaccagcccatcctctactatagcggacagcaggtcagagagggggcg
caggacgcaccccaggaccagacaggggggtacagctacacccagcaacccgtgctgctc
cccttctgcatgaacttgggctacgtgagcggtgtgtttgcggggggccagagctgcgtg
gcgctcgccgaccgtaacgtcatgggtttcatcgccagcctccacgagctggctgctgct
gagaggaagttctactgcaagctgagctctgtgaagaaccacatactacgccccctgttg
gacctgggtgagaactactgctgtcgccaaagcaccactggacagaggccatgggtcaga
gagtcgttgagtacagccctaggcccctcgtccacagtgctgctacagagcctggcgagg
tgttatagtcgcctgtgtcacctgactggccagcactccgcctccctcaccgccaacctg
cgccgccgccgggaggttaaaagcctggttatgctggagcacgccagcatcttcctggac
acgtacaatgagtactgctgctctgtgggtaacttcctggtgatggggggattccaggct
ctggccaagccctcgctagatttctttgggaagtgtccagagcttttgcagcggctggca
gagtccagtgaggagaacattcctctgagtgaactgttggtggcgctcttctacctgccc
atgagacaccttcacgagtatggcaggctgcttctcaaactgggtacctgcttcgaggtg
agctcagtggactaccagaagctgcaggacggctgctctaagtttgaggccctggctctt
catctgaagaggaagaggaaggaggcagagtacacataccacttctggaagagcttccct
ggcaagatgacggtcagtggcctggattccctgcgtaagccccaccggaggctgatctgt
gagagcagtaacaaggccctgacgctacagaactctggaaggttctctgtcaactggttc
atcctcttcaacgatgcactcgtccacgctcagggcgtggttccctataaaagccttttc
tccacccaccacgtattcccattggccacactgtgggtcgagcccatcccggaggagaac
actgggctgtatggactgaaggtgatctcacctgaggagaccttcaccctgctggcctgt
tcttccatggagaaggctaagtggcttcgctccatcaaccaggcagtggaccaggccatg
agtggggcggggcagtcaggctcaggggcagggcagagggcggagcctcccatctcccgg
accgcctcctacaccttctacaaggacagccgtctgaaggaggccacctacgagggccgc
tggctggccggcaagcccaatgggaggggtattgtgaagtggcctgatgggagaatttac
acggggacgttcaagaacggactggaggatggttttggagattacgttattcccagcaag
acgttgaacaagaacgaccactatcaaggccactggaaagaaggaaagatgcacggcatc
ggaacattcaagtatgctacaggtgagttgtacgagggctcgttccaggacaacatgcgt
cacggtcacggcatgctgcgcagcggcacgctaaactcctcctcccccagcgtcttcatc
ggccaatgggtgcacgacaagaagacgggctacggcgtctttgatgacatcaccagagga
gagaagtacatgggcatatggcaggatgaccagcggcagggcacgggcgtcatagtaacc
cagtttggcctgtactacgagggagccttcaacaacaacaagatgcagggcacaggggtc
ctgctgtctgaggacgacaccacatatgaaggagagttctcggaggactggactctcaac
ggaaagggtgtgctgaccatggctaatggggactactttgagggctccttcaccggggag
tggggttccggcctgaaggtcaccggatcctacttcaaacccaacctctaccactcagac
ggggacaagggccgcgctgttaagttggggcgcctggcggtgcgtccggaggagaagtgg
agggcagtgtttgaggagtgttggaggaggctgggctgtgaggcccctggccagggagag
aaccagagagcctgggagaacatcgctgtagccctgaccaccagcaggagacagcacaga
gacagcccggagttgaacctgagtcggactcataatagaactctggagagtctggagttc
atcccccagcagcatgttggcccttttaccatggagaagtatgacagtatccgccattac
ctcatcaaggcatgtgacacgcccctgcaccccctgggcaggctgatggagaccctggtg
gctgtctacaggatgacctatgtgggggtgggggccaaccgccgccttctactgcaggct
gtcaacgagatcatgtcctacctggcccgcatcttccagctcgtcaggttcctgttccca
gatctgcctgaggagggtggagcgatccctgaaccatcctctgactcccaggacaagaag
gactccaattgcacagacaaccagctagaatcccccaaacctgggcgtgtggtgagtagc
tcagctctgctcctgccagtgttgctgcctcgtctctacccccctctcttcaccctgtac
gccctggagaaggagagagaggacgacgtgtactgggagtgtgtcctccgcctcaacaaa
cagccagacatggccctgctcgccttcctcggagtgcaacataagttttggcctgtttcg
gttccagtactgggggagaagaccgaggttgtatccagcacaaaagacgcctgttttgcc
tcagcaacggagaccttacagcagatcagcacaacgttcaccccgtccgacaagctgcag
gtgatccagctgaccttcgaggagatcaccaaggaagtgatgtcatctctgaaggataac
ttcctgtggtccatggacgacctgtttcctgtgttcctctacgtggtgctgcgcgcccgg
atcaggaacctggggtcagaggtgagtctgatcgaggacctgatggacccctgtgtacag
catggagaacacggcatcatgtttaccacactcaaggcgtgttactaccagatccagcat
gagaagaccacataa
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integrated database retrieval system