KEGG   Coregonus clupeaformis (lake whitefish): 121540129
Entry
121540129         CDS       T08357                                 
Symbol
als2b
Name
(RefSeq) alsin isoform X1
  KO
K04575  amyotrophic lateral sclerosis 2 protein
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cclu03036]
    121540129 (als2b)
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    121540129 (als2b)
SSDB
Motif
Pfam: RCC1 MORN RCC1_2 VPS9 PH RhoGEF Tudor_2
Other DBs
NCBI-GeneID: 121540129
NCBI-ProteinID: XP_045063859
LinkDB
Position
26:complement(50420733..50440284)
AA seq 1724 aa
MHQHCHGQISVMESQRKSSGEEDSSGERGLLHTWKGYSYSVTPERVLLSRPVLQAALGTR
HGVLLVEGGQVYSLGELPWKQSQVSDVGPLKPILESALSGQRVVVVAAGSFHSGAVTEDG
GVHMWGENSSGQCGLSSLAVVPNPTPVAVLDPDTSTPQTIRVLDLACGEQHSLALSAQHE
VWAWGSGCQLGLVTTIFPVWKPQKVEHLAGRHVLQVACGAFHSLALVRCLPPQEARRPLP
DKCGQCNQLLYTMTDKEDHVIISDSHYCPLGVELLAEGEARLGPGGSPPPGLQSSPSEPL
LSSHTTVSASAPGPHPSITEHTDYERGRTVAQNGEVLTTTDCDISVAGTDSGLTVGGVGG
AGSQNSPYPDDQAVKEYLKKLSDTSLAEETAKMTIAGASFQPPADSLDLLTSNLIPGVMP
VTTTSSALNSLVSSCASAVGERVVSTYEALSLKKMINYYYPGVGGVAGVPGRVQGGFPGG
PAEERVRLEESMQGKKSCSTGDIREEEAEGLSRRLSLPGLLSQVSPRLLRRASRPRVRAV
PLTPVGGLPEAGELLPSLQTEVWSWGRGEDGQLGHGDNLPRLQPLCIKCLSSKEVVLVAA
GAHHSLALTAQSQVFSWGSNSSGQLGHMESPTTIPRLAKLSEGIRVWDVGAGVQHTLFLA
DGDCYQPILYYSGQQVREGAQDAPQDQTGGYSYTQQPVLLPFCMNLGYVSGVFAGGQSCV
ALADRNVMGFIASLHELAAAERKFYCKLSSVKNHILRPLLDLGENYCCRQSTTGQRPWVR
ESLSTALGPSSTVLLQSLARCYSRLCHLTGQHSASLTANLRRRREVKSLVMLEHASIFLD
TYNEYCCSVGNFLVMGGFQALAKPSLDFFGKCPELLQRLAESSEENIPLSELLVALFYLP
MRHLHEYGRLLLKLGTCFEVSSVDYQKLQDGCSKFEALALHLKRKRKEAEYTYHFWKSFP
GKMTVSGLDSLRKPHRRLICESSNKALTLQNSGRFSVNWFILFNDALVHAQGVVPYKSLF
STHHVFPLATLWVEPIPEENTGLYGLKVISPEETFTLLACSSMEKAKWLRSINQAVDQAM
SGAGQSGSGAGQRAEPPISRTASYTFYKDSRLKEATYEGRWLAGKPNGRGIVKWPDGRIY
TGTFKNGLEDGFGDYVIPSKTLNKNDHYQGHWKEGKMHGIGTFKYATGELYEGSFQDNMR
HGHGMLRSGTLNSSSPSVFIGQWVHDKKTGYGVFDDITRGEKYMGIWQDDQRQGTGVIVT
QFGLYYEGAFNNNKMQGTGVLLSEDDTTYEGEFSEDWTLNGKGVLTMANGDYFEGSFTGE
WGSGLKVTGSYFKPNLYHSDGDKGRAVKLGRLAVRPEEKWRAVFEECWRRLGCEAPGQGE
NQRAWENIAVALTTSRRQHRDSPELNLSRTHNRTLESLEFIPQQHVGPFTMEKYDSIRHY
LIKACDTPLHPLGRLMETLVAVYRMTYVGVGANRRLLLQAVNEIMSYLARIFQLVRFLFP
DLPEEGGAIPEPSSDSQDKKDSNCTDNQLESPKPGRVVSSSALLLPVLLPRLYPPLFTLY
ALEKEREDDVYWECVLRLNKQPDMALLAFLGVQHKFWPVSVPVLGEKTEVVSSTKDACFA
SATETLQQISTTFTPSDKLQVIQLTFEEITKEVMSSLKDNFLWSMDDLFPVFLYVVLRAR
IRNLGSEVSLIEDLMDPCVQHGEHGIMFTTLKACYYQIQHEKTT
NT seq 5175 nt   +upstreamnt  +downstreamnt
atgcatcagcattgccatggacaaatctcagtgatggagtcccagaggaaaagctctggt
gaggaggacagttcaggggagcgaggtttgctccacacctggaagggctactcctatagt
gttaccccagagagagtgctcctgtccaggcctgtgctgcaggctgccctggggacacgc
catggggttctactggtggagggcgggcaggtgtacagcctcggtgagttgccatggaaa
cagagccaggtgtcggatgtgggccccctgaagcccatcctagagagcgctctcagcggc
cagcgcgtggtcgtcgtggcagcaggcagcttccacagcggggcggtgactgaggatggc
ggggtccacatgtggggggagaactcctccggccagtgtggcctgtccagcctcgccgta
gtccccaaccctactccagtggctgtcctggaccccgacactagcacccctcagaccatc
cgggtcctggatctggcctgcggggagcagcactcccttgctctctctgcccagcacgag
gtgtgggcctggggcagcggctgccagctgggcctggtcaccaccatattccccgtgtgg
aagccccagaaggtggagcacctggcgggcagacacgtcctccaggtggcctgtggggcc
ttccacagcctggccttggtgcgttgcctaccccctcaggaggcccggcggcccctgcca
gacaagtgtggccagtgcaaccagctactctacaccatgacggacaaggaggaccacgtc
attatctcagatagtcattactgccccctaggggtggagctgctggctgagggagaggcc
aggctggggcctggagggtcccctccaccagggctccagagctccccttcagagcccctc
ctctcctctcataccactgtctcggcctcagcacctggtccccatccctccataacagaa
catacagactatgagagggggaggacagtggcacaaaatggggaagtcttaaccaccaca
gactgtgacatctctgttgctgggacagactctggtctaactgttggaggtgtggggggt
gcagggtctcagaactccccctaccctgatgatcaggcagtgaaagaatatctgaagaaa
ctgtctgacacctctttggctgaggagactgccaagatgaccatagcaggagcaagtttt
cagcccccagcagatagccttgacctcctgacctctaacctcatccccggtgtcatgccg
gtgacgaccaccagctctgccctcaacagcctggtctcatcctgtgcctctgccgtgggc
gagagagtggtctccacctacgaggctctgtccctgaagaaaatgattaactactactac
cctggggttgggggtgtagcaggagtacccggtagggtgcaaggggggtttccagggggt
cctgcggaggagcgggtgcgtctggaggagtccatgcaggggaagaagagctgcagcacg
ggggatatccgcgaggaggaggccgagggcctgagtcgacgtctctctctgcctggactc
ctctctcaggtgtcccccaggttgctgcggagggccagccggcccagggtgcgagcggtg
cccctcacccctgttggagggctcccagaagcaggggagctgctcccctccctgcagact
gaggtgtggagctgggggcggggcgaggatggccagctaggccatggggacaacctcccc
aggctgcagccactgtgcatcaaatgtctgagcagtaaggaggtggtgcttgtggctgct
ggggcacatcactccctggccctgactgcacagtcccaggtcttctcctggggtagtaac
agctctggccagctaggacacatggagtctcctactactatccctcgccttgccaagctg
tctgaggggatccgtgtatgggacgtgggtgcgggggtgcagcacaccctcttcctggcc
gacggggactgttaccagcccatcctctactatagcggacagcaggtcagagagggggcg
caggacgcaccccaggaccagacaggggggtacagctacacccagcaacccgtgctgctc
cccttctgcatgaacttgggctacgtgagcggtgtgtttgcggggggccagagctgcgtg
gcgctcgccgaccgtaacgtcatgggtttcatcgccagcctccacgagctggctgctgct
gagaggaagttctactgcaagctgagctctgtgaagaaccacatactacgccccctgttg
gacctgggtgagaactactgctgtcgccaaagcaccactggacagaggccatgggtcaga
gagtcgttgagtacagccctaggcccctcgtccacagtgctgctacagagcctggcgagg
tgttatagtcgcctgtgtcacctgactggccagcactccgcctccctcaccgccaacctg
cgccgccgccgggaggttaaaagcctggttatgctggagcacgccagcatcttcctggac
acgtacaatgagtactgctgctctgtgggtaacttcctggtgatggggggattccaggct
ctggccaagccctcgctagatttctttgggaagtgtccagagcttttgcagcggctggca
gagtccagtgaggagaacattcctctgagtgaactgttggtggcgctcttctacctgccc
atgagacaccttcacgagtatggcaggctgcttctcaaactgggtacctgcttcgaggtg
agctcagtggactaccagaagctgcaggacggctgctctaagtttgaggccctggctctt
catctgaagaggaagaggaaggaggcagagtacacataccacttctggaagagcttccct
ggcaagatgacggtcagtggcctggattccctgcgtaagccccaccggaggctgatctgt
gagagcagtaacaaggccctgacgctacagaactctggaaggttctctgtcaactggttc
atcctcttcaacgatgcactcgtccacgctcagggcgtggttccctataaaagccttttc
tccacccaccacgtattcccattggccacactgtgggtcgagcccatcccggaggagaac
actgggctgtatggactgaaggtgatctcacctgaggagaccttcaccctgctggcctgt
tcttccatggagaaggctaagtggcttcgctccatcaaccaggcagtggaccaggccatg
agtggggcggggcagtcaggctcaggggcagggcagagggcggagcctcccatctcccgg
accgcctcctacaccttctacaaggacagccgtctgaaggaggccacctacgagggccgc
tggctggccggcaagcccaatgggaggggtattgtgaagtggcctgatgggagaatttac
acggggacgttcaagaacggactggaggatggttttggagattacgttattcccagcaag
acgttgaacaagaacgaccactatcaaggccactggaaagaaggaaagatgcacggcatc
ggaacattcaagtatgctacaggtgagttgtacgagggctcgttccaggacaacatgcgt
cacggtcacggcatgctgcgcagcggcacgctaaactcctcctcccccagcgtcttcatc
ggccaatgggtgcacgacaagaagacgggctacggcgtctttgatgacatcaccagagga
gagaagtacatgggcatatggcaggatgaccagcggcagggcacgggcgtcatagtaacc
cagtttggcctgtactacgagggagccttcaacaacaacaagatgcagggcacaggggtc
ctgctgtctgaggacgacaccacatatgaaggagagttctcggaggactggactctcaac
ggaaagggtgtgctgaccatggctaatggggactactttgagggctccttcaccggggag
tggggttccggcctgaaggtcaccggatcctacttcaaacccaacctctaccactcagac
ggggacaagggccgcgctgttaagttggggcgcctggcggtgcgtccggaggagaagtgg
agggcagtgtttgaggagtgttggaggaggctgggctgtgaggcccctggccagggagag
aaccagagagcctgggagaacatcgctgtagccctgaccaccagcaggagacagcacaga
gacagcccggagttgaacctgagtcggactcataatagaactctggagagtctggagttc
atcccccagcagcatgttggcccttttaccatggagaagtatgacagtatccgccattac
ctcatcaaggcatgtgacacgcccctgcaccccctgggcaggctgatggagaccctggtg
gctgtctacaggatgacctatgtgggggtgggggccaaccgccgccttctactgcaggct
gtcaacgagatcatgtcctacctggcccgcatcttccagctcgtcaggttcctgttccca
gatctgcctgaggagggtggagcgatccctgaaccatcctctgactcccaggacaagaag
gactccaattgcacagacaaccagctagaatcccccaaacctgggcgtgtggtgagtagc
tcagctctgctcctgccagtgttgctgcctcgtctctacccccctctcttcaccctgtac
gccctggagaaggagagagaggacgacgtgtactgggagtgtgtcctccgcctcaacaaa
cagccagacatggccctgctcgccttcctcggagtgcaacataagttttggcctgtttcg
gttccagtactgggggagaagaccgaggttgtatccagcacaaaagacgcctgttttgcc
tcagcaacggagaccttacagcagatcagcacaacgttcaccccgtccgacaagctgcag
gtgatccagctgaccttcgaggagatcaccaaggaagtgatgtcatctctgaaggataac
ttcctgtggtccatggacgacctgtttcctgtgttcctctacgtggtgctgcgcgcccgg
atcaggaacctggggtcagaggtgagtctgatcgaggacctgatggacccctgtgtacag
catggagaacacggcatcatgtttaccacactcaaggcgtgttactaccagatccagcat
gagaagaccacataa

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