Coregonus clupeaformis (lake whitefish): 121540154
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Entry
121540154 CDS
T08357
Name
(RefSeq) mast/stem cell growth factor receptor Kit
KO
K05091
proto-oncogene tyrosine-protein kinase Kit [EC:
2.7.10.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121540154
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
121540154
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121540154
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cclu04090
]
121540154
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121540154
Protein kinases [BR:
cclu01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
121540154
CD molecules [BR:
cclu04090
]
Proteins
121540154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Motif
Other DBs
NCBI-GeneID:
121540154
NCBI-ProteinID:
XP_045063654
LinkDB
All DBs
Position
26:complement(7291469..7325579)
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AA seq
996 aa
AA seq
DB search
MEYHWVLFSVLLQLTFQTGSSRPTITPSNPHLVIPLNAPFSLHCQGDQVMRWQREDRPKL
RGEVRSNGASDLKIPKAQPVHMGRYICLEESSGEQSSVYVFVKVVVLADPDHAFRKTIVF
SILTHAGDSASIPCLATDPGVVNLSLEPCHGGALPTGLHYVASLEQGMVIYDTKKAFEGC
YICTGRLGGAHVKSHHYDLTVRPVPDAAPVIEMQEPKRVVLTRGQTLTLTCSTTNVNGDI
KLKWAAPPGTQPAVENASRILTEPIKHVRSARLYINSVRARDSGRYRCEGQNEKGISSES
IWLDVYDRGFINLTPSDNGTVRVRAGESLSLRVDMEAYPKPHTFTWSLSGQQLRNTSDHV
ITTQNHQHRYNSVLRLVRLKTSESGVYTFYASNGDATVNQSFSVYVISKPEIVSHEGPVD
GQVRCVAKGYPAPQITWYYCEQPYMRCSHQMNATQEEQDIVTVTLLSPSFGKTEVESRLN
ITTGRFHTLECVATVEGEQAYTLFSISERTVPHELFTPLLIGFVSAAALLCVILIVLFYK
YLQKPKYQIQWKVIEGIHGNNYVYIDPTQLPYNHQWEFPRDKLRFGKTLGSGAFGKVVEA
TAYGMSKADTVMTVAVKMLKPSAHATEKEALMSELKVLSYLGNHMNIVNLLGACTVGGPT
LVITEYCCFGDLLNFLRRKRETFFCSKLGEDCYYRNVMLQRETATAGDSRNGYVDMRPSV
TGVLPNGFSSEKRCSMGKAGGSSSEPDVSEMLHEDCLSLDTEDLLSFSYQVAKGMDFLAS
KNCIHRDLAARNILLTQGRVAKICDFGLARDITTDSNYVVKGNARLPVKWMSPESIFECV
YTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMDAPEFAPSEMYEIMRS
CWEADPFKRPSFSKVVERIEQQLSDTTKHIYLNFSSKFPVTMVTQGASVDQGTQNANVLR
LNSVGSSNASTQPLLASASDDVFLEEMATRLRVHRV
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggaataccactgggtactgttttctgtcttgttgcagttaaccttccaaacaggcagc
tccaggcccaccatcacccccagcaacccccacctggtcattccactcaatgcccccttc
agtctgcattgccagggtgaccaggtgatgcggtggcagcgggaggaccgtccaaaactg
aggggcgaggtgcggagtaatggggcgtccgacctgaaaatccccaaagctcagcctgtc
cacatgggccggtacatctgcctggaggagagcagtggagagcagagctctgtctacgtc
tttgtcaaagttgttgttttggcagatcctgatcatgcctttagaaagaccatagtgttc
agtatcctaacacatgcgggagacagcgcctccatcccctgcctagcaaccgacccgggc
gtggtcaacctgagcctggagccgtgtcatggcggtgccctccctactggcctccactat
gttgccagcctggagcagggcatggttatctacgacactaagaaggccttcgagggctgt
tatatctgcactggcagacttggcggcgcccacgttaaatcacatcactatgatctgact
gtgcgcccagtcccagatgcagcccctgtgattgagatgcaggaacccaagagggtggtc
ctgacgcggggccagactcttaccctgacctgcagcaccaccaacgtcaacggagacatc
aagctgaagtgggctgcaccgcccggcacgcaaccggcggtggagaacgcctcacgcatc
ctgactgagcccatcaaacacgtccgcagcgctaggctctacatcaactctgtcagggca
cgggattctgggagatatcgatgtgagggtcagaatgagaaggggatcagctctgagtca
atctggctggacgtctatgatagaggcttcattaatctgactccgtcagacaacggtaca
gtgcgtgttcgtgctggtgagagtttgtccctgcgtgtggacatggaggcctaccccaaa
ccacacaccttcacctggagcttatctggccagcagctcaggaacacctccgaccatgtc
atcaccacacagaaccaccaacacaggtacaacagtgtgctgaggctggtgcgtttgaaa
acgtcagagagtggagtctacaccttttatgcctccaatggtgatgcaacagtcaatcag
tcattttcggtctacgtaatcagtaaaccagagattgtatctcatgagggcccggtggac
ggacaggtgcgatgtgtggctaagggataccccgccccacagatcacctggtactattgt
gaacagccctatatgaggtgctcccaccagatgaacgccactcaggaggagcaggacatt
gtcacagtgacattgttgagtccctcctttgggaagacggaggtagagagcaggctgaac
atcaccacgggaagattccacacgttggagtgtgtggccacagtggagggagagcaggcc
tacacactgttctctatcagtgagagaacagtgccccatgagctcttcacccctctgctg
attggctttgtgtcagcagctgccctcctctgcgtcatcctcatagtgctcttctacaag
tacctgcagaaacccaaataccagatccagtggaaagtcattgaaggtatccacggaaac
aactatgtgtatattgaccctacccagctcccatacaaccaccagtgggagttcccccgg
gacaaactgcgtttcgggaaaactctgggctccggagcctttgggaaggtggtggaggct
actgcttatggaatgtccaaagctgatacagtgatgacagtggcggtcaaaatgctcaaa
cccagtgcccatgccactgagaaggaggcgctgatgtcagagctgaaagttctcagttac
ctgggaaaccacatgaacattgtcaacctgcttggagcctgtactgttggaggcccaacc
ctggtgatcacagagtactgctgctttggtgatctcctcaactttctgaggaggaagaga
gagacgttcttttgctccaagctaggggaggactgctactacaggaatgtcatgctgcag
agggagacagctacagctggagacagcaggaatggctacgtggatatgaggccttctgtc
actggcgtcttgcccaatggcttctcctcagagaagaggtgctcgatgggcaaagcaggt
ggttccagtagtgagccagatgtgagtgagatgctccatgaggactgtctctctctggac
acagaggatctgctcagcttctcctatcaagtggccaaaggcatggacttcctggcttcc
aaaaattgcatccacagagacctggcagccaggaacattctcctgacccagggacgagtg
gcaaagatctgtgacttcggcctggctcgtgacatcaccactgactccaattatgtagtc
aaaggcaatgctcgcctcccagtcaaatggatgtctccggagagcatatttgagtgtgtg
tacacatttgagagtgacgtgtggtcctatggcatcttgctctgggaaatcttctcactc
ggaagcagtccatatcctgggatgcctgttgactcaaagttctacaaaatgattaaggaa
ggatacagaatggatgcaccagagtttgcaccgagtgaaatgtatgagataatgaggtcg
tgctgggaagcggacccctttaagagaccctccttcagcaaggttgtggagaggatcgaa
caacagctgtcagacaccaccaaacacatctatctgaatttcagctccaagtttccggtt
acaatggtgacccagggtgcgagtgtggaccaggggacacagaacgctaacgtcctgcgt
ctcaactcggtgggcagcagcaacgcctccactcagcccctattggccagtgccagcgat
gacgtcttcctggaagagatggccaccaggctcagggtccaccgggtgtaa
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