Coregonus clupeaformis (lake whitefish): 121540174
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Entry
121540174 CDS
T08357
Name
(RefSeq) F-box/LRR-repeat protein 5 isoform X1
KO
K10271
F-box and leucine-rich repeat protein 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121540174
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121540174
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
Hemerythrin
LRR_4
LRR_6
F-box
LRR_At1g61320_AtMIF1
LRR_At5g56370
VIT_2
LYRM_2
Melibiase_C
Motif
Other DBs
NCBI-GeneID:
121540174
NCBI-ProteinID:
XP_041704773
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Position
26:8515359..8524885
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AA seq
693 aa
AA seq
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MAPFPDEVDVFTGPHWRMKQLVGLYCEKLSQTNFSNNNDFRTFLQSLCATFKEFKMHEQI
ENEYIIGLLQQRSCTVYNVHSDNKLSEMLSLFEKGLRSVKSEYEQLNYAQQLKERLEAFT
QDFLPHMKEEEEVFQPMLMQYFTYEELKDLKKQVIAQHCSQQRWDCAAEVLKGLSLWSQA
EELHKAFKYADHEKTDASELEKELCSTHISQLPTEILLHLFCYLGPEDLCHCGQVSSAWS
DLAKTGSLWRHLYPVRWARGDHYRGPPADLTQEPDEEWVKSLQDEGKAYQEWDEDADVDE
SDETCEDSLAISAAQREKKLLNKIIQNLLPAVGSSVRSIVLAYSSTVSSKMVRQILSLCP
NITHLDLTQTDVTDSAFDSWSSLGACLSLEHLDLSGCEKITDHTLKKLSMGLGYLPSLTC
SQKRSDRQAKLLKSPPISLLDERSLRPMGRNQQALIFKQRTGRRCNSPSRVWVLDPSELA
DIEDAAEWNRRGGVSTPEGQGFVAMKPGGGSCCCRRSRRRGLRTSFSTSYWQKQYGLGEV
CCGHSTCCTGETALRALGGLQSESYITRGSAGAEFWTKCSSGGQRCLKLYNRTDQSDTRR
SLRFLSLSGCYQVTDLGLRALSQRGSLPFLEHLNLSGCLLITEVGLQELVSACPALNDEH
FYYCDNINGPHADTASGCQNLQCGFRACCRSGE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggctccttttcccgacgaggtggatgtttttactggcccacattggcgaatgaaacag
ttggtaggactctactgcgagaagctgtcacagaccaacttctccaacaacaatgacttc
cgcacatttcttcagtcactgtgtgccaccttcaaggagttcaagatgcatgaacagatt
gagaacgagtatatcatcggcctgttgcaacagcgcagctgcactgtgtataatgtgcac
tccgataacaagctctcagagatgttgtccctgtttgagaaagggctgagaagcgttaag
agcgagtatgagcagctgaactatgcccagcaactgaaagagcgactggaggcattcaca
caggacttcttaccccacatgaaggaggaggaagaggtgttccagcccatgctgatgcag
tacttcacctatgaggagcttaaagacctcaagaagcaggtgatagcacagcactgtagc
cagcagcgatgggactgtgcagcggaagtgctgaaggggctcagtctgtggagtcaggca
gaggagctgcacaaggccttcaagtatgctgaccatgagaagactgacgcctcagaacta
gagaaagagctgtgctccacccacatctcccagctacctacagagatcctgctgcatctg
ttctgctacctgggtcctgaggacctttgtcactgtggccaggtgtcctcagcctggtcc
gacctggccaagaccggctctctgtggaggcacctttaccctgtacgctgggccagaggg
gatcactatcgtggccccccagctgatctgacccaggaaccggatgaggagtgggtgaag
agtctgcaggatgagggcaaggcctaccaggagtgggatgaggatgcagatgtcgatgag
tctgatgagacttgtgaagactccttggctataagcgcagctcagagggagaagaagcta
ctgaataaaattattcagaaccttctgccagctgtgggttcctctgtcaggtccatcgtt
ctggcctacagctctacggtctccagtaagatggtgcgtcagatccttagtctctgtcct
aatatcacccacctggacctcactcagactgatgtcacagactccgcctttgacagttgg
tcatctctgggggcgtgtctgtctcttgagcacctggacctatccggctgtgagaagatc
actgaccacaccctgaagaagctgtcaatgggtctggggtacctgccatctctcacctgc
tctcagaaacgatccgaccggcaagccaagcttctgaagagccctcccatcagtctgctg
gacgagcggagcctccgtccgatggggcgcaaccagcaggccctgatcttcaaacagcgg
actgggagacggtgcaacagcccctccagggtctgggtcctggacccctcggagctggct
gacatcgaggatgcagcagagtggaaccgccgcgggggagtgtctacccctgaggggcaa
ggttttgtggcgatgaagccaggtggaggttcgtgttgctgcaggaggagtaggaggcgg
ggcctcaggacaagctttagcacctcctactggcagaagcagtatgggctaggggaggtc
tgctgtggccattcaacctgctgcactggtgagacggccctgagggctttaggagggctg
cagtctgagtcttacatcaccaggggcagtgcaggggcagagttttggacaaaatgctcc
tctgggggccagcggtgcctgaagctttacaacagaactgatcagtcagacactcggcgc
tcgcttaggttcctcagcctctctggatgctatcaggttacagacctgggcttgagagcg
ctgtctcagcgtggcagtcttcctttcctggagcatctgaacctgtctggatgtctcctc
atcactgaggtggggctacaggaactggtgtcagcctgtcctgccctcaatgatgaacac
ttctactactgcgacaacatcaacggtccccatgctgatacggccagcggctgccagaac
ctgcagtgtggcttcagggcgtgctgccgctctggagagtga
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