Coregonus clupeaformis (lake whitefish): 121540229
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Entry
121540229 CDS
T08357
Name
(RefSeq) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like
KO
K03766
beta-1,3-N-acetylglucosaminyltransferase 5 [EC:
2.4.1.206
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00601
Glycosphingolipid biosynthesis - lacto and neolacto series
cclu01100
Metabolic pathways
Module
cclu_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
cclu_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
121540229
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121540229
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.206 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
121540229
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
121540229
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
B3GALT2_N
Motif
Other DBs
NCBI-GeneID:
121540229
NCBI-ProteinID:
XP_041704860
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Position
26:complement(25534067..25545981)
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AA seq
379 aa
AA seq
DB search
MFLNFRRIRKCQCVQLVTTCFVLSVLMVCWEQLDHHVVSHMKSYSYRYLVNSYDFINESF
GIRQQEAESQSNFPYLINHHDKCDSNEVLLLLFVKSSPENLERRQAIRATWGNETYTQRE
LGATVRVVFALGVHPNPQQRGHVQRGLLGEDQVYGDLVQQDFVDTFHNLTIKLLLQFRWS
HTYCSQARFLMSADDDIFVHMPNLVHYLRSLIRQGARDLWVGHVHRGAPPNRRKDSKYYV
PYEMYQWPSYPDYTAGAGYVVSGDVATKIYQATLSLNASLYIDDVFMGICANAMGVSPQE
HVYFSGEGKAPYHPCIYDKMITSHGHVADVRYLWKAATDPQIHYISSGLVGKLYCTAVKV
MFLCKPYYFNTYPCKAAFS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgaatttcagaaggatcagaaaatgtcaatgtgtgcagctggtgacgacgtgc
tttgtcctgtccgtgttgatggtgtgctgggagcagctggaccaccatgtggtgagccac
atgaagtcctactcataccgctatctggtcaacagctacgacttcatcaacgagagcttt
ggcatccgccagcaggaggctgagagccagagcaacttcccgtacctcatcaaccaccat
gacaagtgtgacagcaatgaagtgctgctgctgctgttcgtcaaatcttccccagagaac
ctggagaggaggcaggccatccgggccacctgggggaatgagacctacacccagagggag
ttgggggccactgtgagggtggtgtttgccctgggggtccaccccaacccccaacagagg
ggccatgtacagagggggctgctgggggaagaccaggtctatggggacctggtccagcag
gactttgtcgacacctttcacaacctcaccatcaaactgctgctgcagttccgctggagc
cacacctactgcagccaagcacgattcctcatgtcagccgacgacgacatctttgtccac
atgcccaacctggtgcactacctgcggagcctgatccggcagggggcccgggacctctgg
gtgggccacgtgcacaggggagccccccctaaccgccggaaggacagcaagtactacgtg
ccttatgagatgtaccagtggccctcttacccagactacacagcgggggcagggtacgtt
gtctcaggggacgtagctaccaaaatctaccaggccactctgtccctcaatgcctcgctg
tacattgacgatgtgttcatgggcatttgtgccaacgccatgggggtgtctccccaggaa
catgtttacttttcaggggaagggaaggccccctatcacccctgcatctatgataagatg
atcacctctcacggacatgtggcagatgtccggtacctgtggaaggcagccacggaccca
cagattcattatatttcctctggcttggtgggaaagctgtactgcacagcagtgaaagta
atgtttctctgtaaaccttactatttcaatacctacccatgcaaggcggcattttcatag
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