Coregonus clupeaformis (lake whitefish): 121540247
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Entry
121540247 CDS
T08357
Name
(RefSeq) ELAV-like protein 4 isoform X1
KO
K13208
ELAV like protein 2/3/4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121540247
03041 Spliceosome [BR:
cclu03041
]
121540247
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121540247
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121540247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RNA_bind
Motif
Other DBs
NCBI-GeneID:
121540247
NCBI-ProteinID:
XP_041704900
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All DBs
Position
26:24385695..24476862
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AA seq
455 aa
AA seq
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MFEISRTLNAALLSNEHLKMMVRYPQLSGLATADGSVPERLSPLFPRDLPSTQMGSRSLL
GSTETQWRQAELPQLQGWAEKGLLTQPKMIISNMEPQVTNGPNGTTANGPSSNSRSCPSP
MQTGGPTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNY
IDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKDLEQLFSQ
YGRIITSRILVDQVTGPTGGSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFAN
NPSQKTSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDSMTSLV
GMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTM
TNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaatcagccgaacactcaacgctgctttgttgagcaatgagcatctcaagatg
atggtgaggtacccccagctctcgggactagccactgctgacggctccgtccctgagagg
ctctcgccgctatttcccagggatctcccatccacccagatggggtccaggtcacttttg
ggatcgacagagacacagtggcgtcaggcagaactcccacagctacagggctgggcagag
aagggattgctgacacagccaaagatgataatcagcaacatggagcctcaggtgacgaac
ggccccaacggcaccacggccaatgggccgtccagcaacagccgcagctgcccttcgccc
atgcagactggaggccccaccgacgacagcaagaccaacctcatcgtcaactacctgccc
cagaacatgacccaggaggaattccgcagcctgttcggcagcattggagagatcgagtcc
tgcaagctggttcgcgacaagatcacagggcagagtctaggctatgggtttgtcaactac
atcgacccaaaggatgcagagaaagccatcaacacattaaacggactcagacttcaaacc
aaaacgattaaggtgtcatatgcacgacccagctcagcctccattcgagacgctaacctg
tatgtgagtggtctgcccaagaccatgacccagaaggacctggagcagctcttctcccag
tatggacgcatcatcacctcccgcatcctggtggaccaggtcacaggccccacaggtggt
tcgcggggtgtgggattcattcgctttgataagaggatagaggctgaggaggccatcaag
gggctgaatggacagaaaccctctggagctgccgagcccatcactgtcaagttcgccaac
aaccccagccagaagaccagccaagccctgctgtcccagctgtaccagtcccccaaccgc
cggtacccaggccccctccaccaccaggcccagaggttcaggctggacaatttgcttaat
atggcctatggcgtaaagaggttttctcccatcaccattgacagcatgactagcctggtg
ggcatgaacatccctggccacacaggcactggctggtgcatctttgtctacaacctgtct
ccagactctgacgagagcgtcctgtggcagctgttcgggcccttcggagcagtcaacaac
gtcaaggtcatccgcgacttcaacactaacaagtgcaagggcttcggcttcgtcaccatg
acgaactacgacgaggcagccatggccatcgccagtctcaatgggtaccggttgggcgac
cgcgtcttgcaagtctcgttcaagaccaacaagacccacaagtcctga
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