Coregonus clupeaformis (lake whitefish): 121540267
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Entry
121540267 CDS
T08357
Name
(RefSeq) glypican-1-like
KO
K08107
glypican 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cclu00535
]
121540267
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
121540267
Proteoglycans [BR:
cclu00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
121540267
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Others
121540267
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Gene cluster
GFIT
Motif
Pfam:
Glypican
Fz
PRAI
Motif
Other DBs
NCBI-GeneID:
121540267
NCBI-ProteinID:
XP_041704952
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Position
26:22134679..22244639
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AA seq
554 aa
AA seq
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MGFLQTLLFLCLSAIPLSADNASSKARSCSDVRQFYSGKGFTLNGVPQTEISGEHLRICP
QGYTCCTSAMEETLSNLSRREFEGLVREAGRSLQASLNAQYRSFDTYFTDLLNNSERSLQ
ESFLAKLGSLYSKNARVFQDLYADLRHYYRGSAVNLEETLNEFWARLLERLFKASALPQY
TLTDDYLECVAKQTETLRPFGDVPRDLKPKVTRALVAARSFVQGLTVSGEVVRKVSQVPL
STECTRAMMKLVYCPHCRGLASVKPCANYCRNVMKGCLANQADLDTEWQNLIDTMLQVAS
SFSADPSVDVVIYSIPLRISEAILYMQENTEVFTSKVFQACGTPRVAGTQSSRSEERKKR
VNPASTAMEYKPSPTAGVRLEMQISDVSSKLREMQQYWVQLPAALCSSKVAAGAASDDKC
WNGMTKARYLLEVMGDGLASQINNPEVDIDITKPDMTIRQQIMQLKITTNRLRNALNGND
VDFQDASDDVSGSGSGMCTGESCARSGSHVIVPKTDSTRYYNHPENKKVKGTGTQTHPSI
RLLLFSLATLLLRR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgggttttctacagactctcctattcctttgtctatccgcgatcccgttatccgcggac
aatgcgagcagtaaagcccggagctgttcagatgtccgacagttctacagcgggaaaggc
ttcaccctcaacggggtgccacagacagagatatctggtgagcaccttcggatctgtccc
caggggtacacctgctgtaccagtgccatggaggagaccctgtccaacctgagtcgcagg
gagtttgaggggctggtcagagaggcaggacgctcgctacaggcctcactcaacgcacag
tacaggagcttcgacacatacttcacagatctcctgaataactcggagcgctccctccag
gagtccttcctggccaaactgggctccctctactccaagaatgcccgtgtgttccaggac
ctgtacgctgacctgcgccactactaccgtggctccgctgtcaacctggaggagacgctc
aacgagttctgggcacggctgctggagcgcctgttcaaggcctctgccctcccgcagtac
actctcactgatgactacctggagtgtgtggccaagcagacggagaccctgcggcccttc
ggggatgttccccgcgatctcaagcccaaggtcacccgggccttggtggcggcgcggtca
ttcgtccagggcctgaccgtcagtggagaggtggtccgcaaagtctcacaggttcctctc
agcacagagtgtactcgtgccatgatgaagctggtgtactgtcctcactgtagaggcctg
gcctcagtcaagccctgtgccaactactgcagaaacgtcatgaagggctgcctcgccaac
caggccgacctggacaccgagtggcagaacctcatcgacaccatgctgcaggtggcgtct
agtttcagtgctgaccccagtgtggacgtggtcatctactccatccccctccgtatctca
gaggccatcctctacatgcaggagaacacagaggtcttcaccagcaaggtgtttcaggcc
tgtgggacccccagggtggcaggcacacagagttcaaggtctgaggagagaaagaagaga
gttaaccccgccagcaccgcaatggagtacaaacccagccccaccgcaggggtccgactg
gagatgcagatatctgatgtgtccagtaagctgcgggagatgcagcagtactgggtccag
ctgccagctgctctgtgcagtagtaaagtggcagcaggagcagctagtgacgacaagtgc
tggaatggcatgaccaaggccaggtatcttcttgaggtgatgggcgacggcctggccagc
cagatcaacaacccagaagtggacatcgacatcaccaagccagacatgactatccgccag
cagatcatgcagctgaagatcacgaccaaccggctgaggaacgccctcaacggcaacgac
gtggacttccaggatgccagtgatgacgttagtggttcaggaagtggaatgtgtacaggc
gaatcgtgtgcccgtagtggatctcatgtcattgtgcccaaaacagacagcaccagatac
tacaatcatcctgagaacaagaaggtgaagggcacaggaacccagacacacccctccatc
cgcctcctcctgttctcattggccacactgctgctcaggcgataa
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