KEGG   Coregonus clupeaformis (lake whitefish): 121540280
Entry
121540280         CDS       T08357                                 
Symbol
lama3
Name
(RefSeq) laminin subunit alpha-3
  KO
K06240  laminin, alpha 3/5
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510  Focal adhesion
cclu04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121540280 (lama3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121540280 (lama3)
SSDB
Motif
Pfam: Laminin_G_2 Laminin_G_1 Laminin_G_3 Laminin_I Laminin_II EGF_laminin EGF_LMN_ATRN Syntaxin-18_N IL11 MLKL_N
Other DBs
NCBI-GeneID: 121540280
NCBI-ProteinID: XP_041704971
LinkDB
Position
26:complement(21720596..21742760)
AA seq 1740 aa
MKMTQGTVCWFGGVWGLLLWCALFGPCTDGQRAPQRHPNCRYDYLAQSHQSGKDPLHKGH
PRIPRKYCDTSFNNQSAGAINQRCGPGYYRERTWPHGGQCVPCNCNGLSNECDEQTGRCL
NCQYNADGDRCERCKEGYYGNASQKTCRGCPCPFIANNFAVACLDIGASEIECLCKPGYT
GTRCERCAPDYYGNPMIYGGRCQRCHCDAISTCDHLTGKCKKPDDPSTDDQCKECDSCTQ
ALLNDLEKMDDGLEMLRQQLQVIGSNSSPADLNQLEGAINETKALVERYSTTVDAQGPKV
NQLEADVLSLDQDISLLEDKASYSLSDAENVLVKVIQTKQRAEDLIPEAQDLLVNIEDLL
RSLSEANSNVTNITVVAEEVARMMKEVQRMVQEMRQLGCSNQTEKAAREQEDAHKLLDFI
RNNMTAPLDDNQAVANETAESLMTSGSVFRDLAKAVAEADDMVNRTRRLNSNSTDFLRDL
MKLRDELERKHDSILPEMNMAKHKLKNITSLLEMLKEIKKEYEHLAAEIDGAKPNLTKRL
NDIAEAKQKEGIVIMAEEHAEELHRLAMELQMAVHNATNSSDLQHAAESVGAYSSIIKAI
EEAEMAANQSKEAADKALKDVEEQGLTNRSEELKHNASSLLTEAMNAEKDLRETSAKVDS
DKQRVGQTKNKRDMLRKDALAVTENLKEIQRDGIVQLIDSAKTAVTAANNTVNDVTDRLN
NISLGHIRLPNVSSNIGSMLNEAGIELKKLNETWPTLEDTLSWVQNLSSQAPPSVSMTDS
IRRIKDVIEEARDIVKRLSIGMTFNGKGHIELRPPTNVEDLKAFTAAELLLNRQETNPTR
GRSRRRRQNTQDDRNLFVLYLGNEDSSKDFIGMAVKNNTLRCVYKLGGVVHELNTDHITR
TKVNSTVFDKVVFNRVYQDAEVSLTHSFPSQPVKAFKESCRPNTTVGLLNLDTNSVVFYV
GGYPDDFTPPVELRYPKYRGAIKLSTINYQFFSLYNFKNAINVDKQSLIKVMVSQQSTVP
YYFDGTGYGLVTANKDLEILRRRLLKFHTNSQVENALLFYNGNKDSYTSVTVERGYLVLQ
GRQGTQVLNAKSTRKVSLNNVQFIIVMDKTFEVHVVHGDTTEIVKMDYNIESFKNFYIGG
LPASLRERDNVTAPPFRGCIDNVILSPEEIEFNTTIGVSVGCPTSLLGVHEATFHPGGSL
SVDSQGFWTTPVDMVSLGFRSMENGSDLLRTSKEHHGFQLSLVDGYVVFTFDENALKSTK
TYNDGRWHYLTALRNGTRLELRVDNGDLGQRQSSPQVKPNEQQVVLGGETFRGCLANLHI
RRPEESFIPADFSSFTQKGDVILGMCRLQPPPQVIWEPAGIQERPKKPKPRSGAVHTECR
LPTVPDPQAYQLTGAASWLSYNITPEELNFRPHFSLEIRTRSSEGLLLHVSGNGDISQVA
LYMTNGKIKLSLGKDRVIHNKKKSNDGRWHTVMVSVEKNTFHLVVDGFRVPDGILPAEEG
SSLALQNPVYLGSDPASKTYWAQGVSLPKKSVIGCIRHFKVYNVLVGEPAANHGVPPCFD
GATETGAYFAGTGHVVLDKFFTVGYRFELTFEARPQNTTGLLFHARGRHRNSLNVFMRKN
KVEVHVNDGSGDYSASVTPQQNLCDGTFHVIAVSKQNNVVHLKVDSESQRTVGPSHSSYT
MTQDSLYIGGMSGTSKHKGVPVSSSFVGCLRNIKVNKKPVVFKTASSVVGPVNVNECPAD
NT seq 5223 nt   +upstreamnt  +downstreamnt
atgaaaatgacacaagggactgtttgctggtttggaggagtatggggattattgttgtgg
tgtgctttatttggcccctgcacagatggccagagagcaccacagagacatccaaactgt
aggtatgactatctggctcagagccaccagagtggtaaagatcctttgcacaaagggcac
cccaggatccctaggaagtactgtgacacctcattcaacaaccagtcagctggagccatc
aaccagaggtgtggccctggatactacagagagaggacatggcctcatgggggccagtgc
gtaccctgcaactgtaacggcttgtctaatgaatgtgacgagcaaacagggagatgtctg
aactgtcagtacaatgctgatggggatcgatgtgagcgctgcaaggagggttactacggc
aatgcttcccaaaagacctgtcgtgggtgtccatgtcccttcatagccaacaattttgca
gtagcctgtctggacattggtgcatctgaaatcgaatgtttgtgcaaacctggctacact
ggaaccagatgtgaaaggtgtgctcctgattactatggtaacccaatgatatatggaggc
aggtgccagcgatgccactgtgatgctatcagtacctgtgaccatctgactggaaaatgt
aagaagcctgatgatcccagcacagacgaccaatgcaaagagtgtgacagctgtactcag
gccttactgaatgatttggaaaagatggatgatgggctggaaatgctaaggcagcagctt
caggtcattggttccaacagctcaccagccgaccttaaccagctggaaggtgccattaat
gaaacaaaggctctggttgaaaggtacagcactactgtggatgctcaggggccaaaggtc
aatcagctggaagcagatgttctgagtctggatcaggacataagcctactggaagacaag
gcaagttactctctctcagatgctgagaatgtcttggtgaaagtgatccaaaccaaacag
agagctgaggatcttatccctgaagctcaagatcttctagtgaatatagaagatctcctt
cgatcgctgagtgaggctaactctaatgtaaccaacatcactgtggtggcagaggaggta
gccaggatgatgaaggaggtgcagcgcatggtgcaggagatgagacagcttggctgtagt
aaccagacagagaaggctgccagggagcaagaggatgctcacaaactcttggacttcatc
aggaacaatatgacagctccattagatgacaatcaggctgtagccaatgagacggcagag
tccctgatgacgtcgggctctgtgtttagggatctggccaaggctgtggcagaagcagac
gatatggttaacaggacacggagactcaactccaacagtactgacttcctaagagacctg
atgaaactaagagatgagctggagaggaaacatgattcaatccttcctgaaatgaatatg
gccaaacataaactgaagaatatcacaagccttttggaaatgctgaaggagatcaaaaag
gaatacgagcaccttgcagccgagatagatggagccaagcccaatctaaccaagaggctg
aatgatatcgctgaagcaaagcagaaggagggcattgtcatcatggcagaggagcatgct
gaggagctacacagactggcaatggaactacaaatggcagtacacaatgccaccaacagc
tctgacctgcagcatgctgcagaaagcgtgggagcctacagcagcatcataaaagccatt
gaagaggcagagatggcggccaatcaatccaaagaggcagccgacaaagctctgaaggat
gtggaggagcaaggactgaccaacaggtctgaggaactaaagcataatgcaagtagctta
ctgacagaggccatgaatgctgagaaggacctcagagagacctcagccaaagttgacagc
gacaagcaacgtgttggtcagaccaagaacaaaagagacatgctgagaaaagatgctctt
gcagttacagagaatcttaaagagattcaaagagatggcattgtgcagctcatagactct
gccaaaacagctgtcaccgctgccaataacacagtcaatgatgtaacagacagactaaat
aatatcagcctgggacatataaggcttcctaatgtcagttcaaacattggcagtatgctc
aatgaggctggcattgaattgaagaaattgaacgagacatggcctactttggaagacacc
ctcagctgggtgcaaaacctgagctcccaggctccacctagtgtcagtatgacagacagc
atcaggagaatcaaggacgtgatagaggaggccagagacattgtcaaaagactctctatc
ggcatgaccttcaatgggaagggtcacattgagctccgcccccccaccaatgttgaggat
ttgaaggcgtttacagccgctgaacttcttctcaaccgccaggagaccaatcccactagg
ggccgcagccgtaggcgcagacagaacacacaggatgacagaaacctctttgtgctctat
ctcggcaacgaggactcatcgaaagacttcattggaatggctgtaaagaataacacactc
cgctgtgtatacaagctgggtggagtcgtacatgagttgaacaccgaccacataaccaga
accaaagtgaactccactgtttttgacaaggtcgtctttaacagagtttaccaagatgct
gaggtcagtctcacacatagctttccatcacagcctgtcaaagcgtttaaggagagttgc
cggcccaacacgacagttggcctcctcaacctggacacgaacagtgtagtcttctacgtg
ggcggctatcctgacgacttcactcctccagtggagctgcgctaccccaagtaccgtgga
gccatcaaactgtctactatcaactatcaattctttagtctgtacaacttcaagaatgcc
atcaacgtagacaaacagtcattaataaaggttatggttagtcaacagtcaacagtgcct
tattattttgacggcactggttacggtttggttacagctaataaagaccttgaaatcctg
agaagaagacttctcaagttccacacaaacagccaggtggagaatgcattactgttttat
aatggaaataaggattcgtacactagtgttactgtggagagaggttatcttgtgctgcag
ggaagacaaggcacccaagtcctcaatgccaagagtactagaaaggtttcactcaataat
gtacaatttataatagtcatggacaaaacatttgaagttcatgttgtacatggagataca
actgagattgtcaaaatggattacaacatagaaagtttcaagaatttctacattgggggt
ctaccagcatcattaagagaaagagataacgtcacagcccctccattcagaggatgtata
gataatgtgattttatcacctgaggagattgagtttaacacgacaattggtgtcagtgtt
ggatgcccaacctcacttttgggtgttcatgaggctactttccaccctggtggctccctc
tcagtggactctcagggtttctggaccacccctgtggacatggtttctctggggttcagg
agcatggagaatggaagtgatcttctcaggaccagcaaagagcatcatggattccagctc
tcattggttgatggctatgtggtgtttacctttgatgaaaatgccttgaagtctaccaag
acatacaatgatggaagatggcactacttgactgcattaaggaatggcacacgattggag
ttgagggttgataacggggacttgggccagcgtcaatcctctccccaagtcaagcccaat
gaacagcaggttgtgttgggaggagagaccttcaggggctgcctggctaaccttcatatc
aggaggcctgaagaaagctttattcctgctgacttcagctcgttcacccagaagggagat
gtaatcctggggatgtgcagactacagccccctcctcaggtcatatgggagccagcaggc
attcaagagaggcccaagaaacccaaaccaagatctggtgctgtgcatactgagtgcaga
ctgcccacagtgcctgacccccaggcctaccagctaactggggccgctagttggctcagt
tacaacatcacacctgaagaacttaatttcaggcctcacttctccctggagatcagaacc
aggtcatctgaggggctgttgctccatgtctcagggaacggggacatctcccaagtcgct
ctgtacatgaccaacggcaagatcaaactctcactggggaaggacagagtcatccacaac
aagaagaagagcaacgatggaagatggcatacagtgatggtcagtgtggagaagaacact
ttccatctggtcgtggatggtttccgtgtgcctgatggtattctgcctgcagaggagggt
tcctccttagccctgcagaacccggtctatctgggcagtgaccctgcctccaaaacctat
tgggctcagggtgtctctcttcccaagaagagtgtgattggctgtatacgccatttcaaa
gtgtacaatgttctggttggtgaaccagccgccaatcacggggtcccgccctgctttgat
ggggcaacagagacgggggcatactttgctggcacagggcatgtggtcttagataagttc
tttactgtgggctatcgttttgagctgacctttgaggctcgcccacagaacaccacaggc
ctcctcttccatgccaggggtcgtcataggaacagtctaaatgtgttcatgaggaaaaac
aaggtggaggtccacgtgaatgatgggtcaggtgactacagtgcatctgtgacacctcaa
caaaacctgtgtgatggcacattccatgttattgcagtgtccaaacagaacaatgtagtc
catctgaaggtggactcagagtctcagcgtacggtcgggccttcccactcctcctacaca
atgactcaggattccctctacattggtggcatgtccggcacatcaaagcataaaggagtg
ccagtctcttcttcgtttgttggctgcttgcggaacataaaggtcaataagaagcctgtt
gtttttaagacagcctccagtgtggtcggccctgtgaacgtcaatgaatgcccagcagac
taa

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