Coregonus clupeaformis (lake whitefish): 121540280
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Entry
121540280 CDS
T08357
Symbol
lama3
Name
(RefSeq) laminin subunit alpha-3
KO
K06240
laminin, alpha 3/5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510
Focal adhesion
cclu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121540280 (lama3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121540280 (lama3)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
Laminin_I
Laminin_II
EGF_laminin
EGF_LMN_ATRN
Syntaxin-18_N
IL11
MLKL_N
Motif
Other DBs
NCBI-GeneID:
121540280
NCBI-ProteinID:
XP_041704971
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All DBs
Position
26:complement(21720596..21742760)
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AA seq
1740 aa
AA seq
DB search
MKMTQGTVCWFGGVWGLLLWCALFGPCTDGQRAPQRHPNCRYDYLAQSHQSGKDPLHKGH
PRIPRKYCDTSFNNQSAGAINQRCGPGYYRERTWPHGGQCVPCNCNGLSNECDEQTGRCL
NCQYNADGDRCERCKEGYYGNASQKTCRGCPCPFIANNFAVACLDIGASEIECLCKPGYT
GTRCERCAPDYYGNPMIYGGRCQRCHCDAISTCDHLTGKCKKPDDPSTDDQCKECDSCTQ
ALLNDLEKMDDGLEMLRQQLQVIGSNSSPADLNQLEGAINETKALVERYSTTVDAQGPKV
NQLEADVLSLDQDISLLEDKASYSLSDAENVLVKVIQTKQRAEDLIPEAQDLLVNIEDLL
RSLSEANSNVTNITVVAEEVARMMKEVQRMVQEMRQLGCSNQTEKAAREQEDAHKLLDFI
RNNMTAPLDDNQAVANETAESLMTSGSVFRDLAKAVAEADDMVNRTRRLNSNSTDFLRDL
MKLRDELERKHDSILPEMNMAKHKLKNITSLLEMLKEIKKEYEHLAAEIDGAKPNLTKRL
NDIAEAKQKEGIVIMAEEHAEELHRLAMELQMAVHNATNSSDLQHAAESVGAYSSIIKAI
EEAEMAANQSKEAADKALKDVEEQGLTNRSEELKHNASSLLTEAMNAEKDLRETSAKVDS
DKQRVGQTKNKRDMLRKDALAVTENLKEIQRDGIVQLIDSAKTAVTAANNTVNDVTDRLN
NISLGHIRLPNVSSNIGSMLNEAGIELKKLNETWPTLEDTLSWVQNLSSQAPPSVSMTDS
IRRIKDVIEEARDIVKRLSIGMTFNGKGHIELRPPTNVEDLKAFTAAELLLNRQETNPTR
GRSRRRRQNTQDDRNLFVLYLGNEDSSKDFIGMAVKNNTLRCVYKLGGVVHELNTDHITR
TKVNSTVFDKVVFNRVYQDAEVSLTHSFPSQPVKAFKESCRPNTTVGLLNLDTNSVVFYV
GGYPDDFTPPVELRYPKYRGAIKLSTINYQFFSLYNFKNAINVDKQSLIKVMVSQQSTVP
YYFDGTGYGLVTANKDLEILRRRLLKFHTNSQVENALLFYNGNKDSYTSVTVERGYLVLQ
GRQGTQVLNAKSTRKVSLNNVQFIIVMDKTFEVHVVHGDTTEIVKMDYNIESFKNFYIGG
LPASLRERDNVTAPPFRGCIDNVILSPEEIEFNTTIGVSVGCPTSLLGVHEATFHPGGSL
SVDSQGFWTTPVDMVSLGFRSMENGSDLLRTSKEHHGFQLSLVDGYVVFTFDENALKSTK
TYNDGRWHYLTALRNGTRLELRVDNGDLGQRQSSPQVKPNEQQVVLGGETFRGCLANLHI
RRPEESFIPADFSSFTQKGDVILGMCRLQPPPQVIWEPAGIQERPKKPKPRSGAVHTECR
LPTVPDPQAYQLTGAASWLSYNITPEELNFRPHFSLEIRTRSSEGLLLHVSGNGDISQVA
LYMTNGKIKLSLGKDRVIHNKKKSNDGRWHTVMVSVEKNTFHLVVDGFRVPDGILPAEEG
SSLALQNPVYLGSDPASKTYWAQGVSLPKKSVIGCIRHFKVYNVLVGEPAANHGVPPCFD
GATETGAYFAGTGHVVLDKFFTVGYRFELTFEARPQNTTGLLFHARGRHRNSLNVFMRKN
KVEVHVNDGSGDYSASVTPQQNLCDGTFHVIAVSKQNNVVHLKVDSESQRTVGPSHSSYT
MTQDSLYIGGMSGTSKHKGVPVSSSFVGCLRNIKVNKKPVVFKTASSVVGPVNVNECPAD
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgacacaagggactgtttgctggtttggaggagtatggggattattgttgtgg
tgtgctttatttggcccctgcacagatggccagagagcaccacagagacatccaaactgt
aggtatgactatctggctcagagccaccagagtggtaaagatcctttgcacaaagggcac
cccaggatccctaggaagtactgtgacacctcattcaacaaccagtcagctggagccatc
aaccagaggtgtggccctggatactacagagagaggacatggcctcatgggggccagtgc
gtaccctgcaactgtaacggcttgtctaatgaatgtgacgagcaaacagggagatgtctg
aactgtcagtacaatgctgatggggatcgatgtgagcgctgcaaggagggttactacggc
aatgcttcccaaaagacctgtcgtgggtgtccatgtcccttcatagccaacaattttgca
gtagcctgtctggacattggtgcatctgaaatcgaatgtttgtgcaaacctggctacact
ggaaccagatgtgaaaggtgtgctcctgattactatggtaacccaatgatatatggaggc
aggtgccagcgatgccactgtgatgctatcagtacctgtgaccatctgactggaaaatgt
aagaagcctgatgatcccagcacagacgaccaatgcaaagagtgtgacagctgtactcag
gccttactgaatgatttggaaaagatggatgatgggctggaaatgctaaggcagcagctt
caggtcattggttccaacagctcaccagccgaccttaaccagctggaaggtgccattaat
gaaacaaaggctctggttgaaaggtacagcactactgtggatgctcaggggccaaaggtc
aatcagctggaagcagatgttctgagtctggatcaggacataagcctactggaagacaag
gcaagttactctctctcagatgctgagaatgtcttggtgaaagtgatccaaaccaaacag
agagctgaggatcttatccctgaagctcaagatcttctagtgaatatagaagatctcctt
cgatcgctgagtgaggctaactctaatgtaaccaacatcactgtggtggcagaggaggta
gccaggatgatgaaggaggtgcagcgcatggtgcaggagatgagacagcttggctgtagt
aaccagacagagaaggctgccagggagcaagaggatgctcacaaactcttggacttcatc
aggaacaatatgacagctccattagatgacaatcaggctgtagccaatgagacggcagag
tccctgatgacgtcgggctctgtgtttagggatctggccaaggctgtggcagaagcagac
gatatggttaacaggacacggagactcaactccaacagtactgacttcctaagagacctg
atgaaactaagagatgagctggagaggaaacatgattcaatccttcctgaaatgaatatg
gccaaacataaactgaagaatatcacaagccttttggaaatgctgaaggagatcaaaaag
gaatacgagcaccttgcagccgagatagatggagccaagcccaatctaaccaagaggctg
aatgatatcgctgaagcaaagcagaaggagggcattgtcatcatggcagaggagcatgct
gaggagctacacagactggcaatggaactacaaatggcagtacacaatgccaccaacagc
tctgacctgcagcatgctgcagaaagcgtgggagcctacagcagcatcataaaagccatt
gaagaggcagagatggcggccaatcaatccaaagaggcagccgacaaagctctgaaggat
gtggaggagcaaggactgaccaacaggtctgaggaactaaagcataatgcaagtagctta
ctgacagaggccatgaatgctgagaaggacctcagagagacctcagccaaagttgacagc
gacaagcaacgtgttggtcagaccaagaacaaaagagacatgctgagaaaagatgctctt
gcagttacagagaatcttaaagagattcaaagagatggcattgtgcagctcatagactct
gccaaaacagctgtcaccgctgccaataacacagtcaatgatgtaacagacagactaaat
aatatcagcctgggacatataaggcttcctaatgtcagttcaaacattggcagtatgctc
aatgaggctggcattgaattgaagaaattgaacgagacatggcctactttggaagacacc
ctcagctgggtgcaaaacctgagctcccaggctccacctagtgtcagtatgacagacagc
atcaggagaatcaaggacgtgatagaggaggccagagacattgtcaaaagactctctatc
ggcatgaccttcaatgggaagggtcacattgagctccgcccccccaccaatgttgaggat
ttgaaggcgtttacagccgctgaacttcttctcaaccgccaggagaccaatcccactagg
ggccgcagccgtaggcgcagacagaacacacaggatgacagaaacctctttgtgctctat
ctcggcaacgaggactcatcgaaagacttcattggaatggctgtaaagaataacacactc
cgctgtgtatacaagctgggtggagtcgtacatgagttgaacaccgaccacataaccaga
accaaagtgaactccactgtttttgacaaggtcgtctttaacagagtttaccaagatgct
gaggtcagtctcacacatagctttccatcacagcctgtcaaagcgtttaaggagagttgc
cggcccaacacgacagttggcctcctcaacctggacacgaacagtgtagtcttctacgtg
ggcggctatcctgacgacttcactcctccagtggagctgcgctaccccaagtaccgtgga
gccatcaaactgtctactatcaactatcaattctttagtctgtacaacttcaagaatgcc
atcaacgtagacaaacagtcattaataaaggttatggttagtcaacagtcaacagtgcct
tattattttgacggcactggttacggtttggttacagctaataaagaccttgaaatcctg
agaagaagacttctcaagttccacacaaacagccaggtggagaatgcattactgttttat
aatggaaataaggattcgtacactagtgttactgtggagagaggttatcttgtgctgcag
ggaagacaaggcacccaagtcctcaatgccaagagtactagaaaggtttcactcaataat
gtacaatttataatagtcatggacaaaacatttgaagttcatgttgtacatggagataca
actgagattgtcaaaatggattacaacatagaaagtttcaagaatttctacattgggggt
ctaccagcatcattaagagaaagagataacgtcacagcccctccattcagaggatgtata
gataatgtgattttatcacctgaggagattgagtttaacacgacaattggtgtcagtgtt
ggatgcccaacctcacttttgggtgttcatgaggctactttccaccctggtggctccctc
tcagtggactctcagggtttctggaccacccctgtggacatggtttctctggggttcagg
agcatggagaatggaagtgatcttctcaggaccagcaaagagcatcatggattccagctc
tcattggttgatggctatgtggtgtttacctttgatgaaaatgccttgaagtctaccaag
acatacaatgatggaagatggcactacttgactgcattaaggaatggcacacgattggag
ttgagggttgataacggggacttgggccagcgtcaatcctctccccaagtcaagcccaat
gaacagcaggttgtgttgggaggagagaccttcaggggctgcctggctaaccttcatatc
aggaggcctgaagaaagctttattcctgctgacttcagctcgttcacccagaagggagat
gtaatcctggggatgtgcagactacagccccctcctcaggtcatatgggagccagcaggc
attcaagagaggcccaagaaacccaaaccaagatctggtgctgtgcatactgagtgcaga
ctgcccacagtgcctgacccccaggcctaccagctaactggggccgctagttggctcagt
tacaacatcacacctgaagaacttaatttcaggcctcacttctccctggagatcagaacc
aggtcatctgaggggctgttgctccatgtctcagggaacggggacatctcccaagtcgct
ctgtacatgaccaacggcaagatcaaactctcactggggaaggacagagtcatccacaac
aagaagaagagcaacgatggaagatggcatacagtgatggtcagtgtggagaagaacact
ttccatctggtcgtggatggtttccgtgtgcctgatggtattctgcctgcagaggagggt
tcctccttagccctgcagaacccggtctatctgggcagtgaccctgcctccaaaacctat
tgggctcagggtgtctctcttcccaagaagagtgtgattggctgtatacgccatttcaaa
gtgtacaatgttctggttggtgaaccagccgccaatcacggggtcccgccctgctttgat
ggggcaacagagacgggggcatactttgctggcacagggcatgtggtcttagataagttc
tttactgtgggctatcgttttgagctgacctttgaggctcgcccacagaacaccacaggc
ctcctcttccatgccaggggtcgtcataggaacagtctaaatgtgttcatgaggaaaaac
aaggtggaggtccacgtgaatgatgggtcaggtgactacagtgcatctgtgacacctcaa
caaaacctgtgtgatggcacattccatgttattgcagtgtccaaacagaacaatgtagtc
catctgaaggtggactcagagtctcagcgtacggtcgggccttcccactcctcctacaca
atgactcaggattccctctacattggtggcatgtccggcacatcaaagcataaaggagtg
ccagtctcttcttcgtttgttggctgcttgcggaacataaaggtcaataagaagcctgtt
gtttttaagacagcctccagtgtggtcggccctgtgaacgtcaatgaatgcccagcagac
taa
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integrated database retrieval system