Coregonus clupeaformis (lake whitefish): 121540302
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Entry
121540302 CDS
T08357
Name
(RefSeq) neurogenic locus notch homolog protein 2-like isoform X2
KO
K20994
Notch 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121540302
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
EGF_3
Ank_4
EGF_DL_JAG
EGF_Teneurin
JAG1-like_EGF2
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
121540302
NCBI-ProteinID:
XP_041705008
LinkDB
All DBs
Position
26:20519112..20582015
Genome browser
AA seq
2488 aa
AA seq
DB search
MGQLPVFSSGKVLVIVVCCVRLSLALQCLDAVKPCVNNATCATFTNGTGYCRCAAGFLGD
YCHHKDPCHPGYCLNGGNCSVAVSGIPGSPTCSCPLGYTGQHCQTPQNSTCYPNNPCANR
GVCTLLSLDKYKCRCAHGWTGMRCNREDSCLSGPCANGGTCSSLSGGKFSCTCPPGYWGP
RCLNDTDECAASTPVCQNEGVCVNTPGSYRCNCAPGFTGRQCETPYIPCSPSPCLNGGTC
RPTSETSYWCHCLPGFNGTNCENNIDDCPDHHCQNGGTCMDGVNTYNCQCPPEWTGQFCT
EDVDECRLQPNTCQNGGTCSNIQGSYTCVCVNGWSGLDCSENIDDCATAACTKGSTCIDR
VASFLCVCPYGKTGLLCHVNDACISSPCRDGAQCDTNPINGMFNCNCAPGYIGSTCNDDI
NECIIGPNPCEHGGLCVNTDGSFTCNCARGYGGPRCETDINECVSSPCQNDGTCLDRIGD
YSCICMEGFEGTHCEIDINECASSPCLNQGTCLDQVKRYVCQCPLGFSGEMCQIDIDECS
STPCLNGAKCIDRPNGYECECAEGFSGPLCKENIDDCDPEPCHHGVCRDGIATFSCDCDP
GYTGSICNVQVMECYSNPCQNRGRCIDLVNKYQCNCLPGTSGVNCEINVDDCASNPCEYG
ECQDGINKYKCVCAPGYTGAKCNVDIHECNSSPCMSGGTCVDKVNGFICQCPPGTHGPLC
HSGTDHCAPQPCVHGDCVEQQSGYHCECESGWVGQHCDQEKDECQSSPCQHSGTCVDRLN
GYSCQCRPGFTGVNCEVNIDECASNPCENHGTCVDGVNSYSCQCDPPYSGKHCEEELVPC
ASHPCERGGVCQPTPDYTSYTCKCPSGWQGFRCTEDVDECRKNPCQNRARCINSQGSYVC
KCQPGYSGLNCQTNIDDCSPNPCLNGGSCVDEVGGFSCDCRPGFGGEHCEAEVDECASQP
CRNGAVCRDYVNSFVCVCRPGFDGILCEHNIPECTESSCLNNGTCVDDINTFSCRCRPGF
YGTFCQYEQNECDSQPCKNGGTCTDGLGSYHCTCPVGYNGQNCQNFVNLCSQPLCQNGGS
CSQSETTWLCHCPVGWTGMYCDVPNMSCQDYAARNGIQVELVCKHSGRCVDVGNAHQCQC
LPGYTGSYCNEMVDECLSNPCRNGATCMDYQGTYECMCKAGYQGVNCEYDVDECHSNPCH
HGGTCINLINHFSCACPPGTHGVQCEVNVDDCAPKRGSWGPRCLNGGQCVDGVGRYTCSC
PPGFAGEHCEGDVNECLSGPCHSPGSLDCVQLANDYQCRCRLGYTGRHCESMVDLCQSKP
CHNSGTCSMNMSSVHGYTCICQPGFTGFNCGEVEGYNCAKLRCKNGGHCQESQGGRPHCR
CQPGFSGPHCETVQGCQNQPCLNGGNCMKDLNDPYQYSCHCPSHFSGRHCENVIFGPSPR
TPASCPYVECEQHSGDKVCDPQCNSHECQWDGGDCSLHWHRPWVNCTAPVPCWELFRNGR
CDPECDNSGCLFDSFECQESAQSYCKYDNYCADHYANKICDKSCNTKACVWDGLDCSGDT
PAKVADGTLVIVVLLQPEELLGDVRGFLRSLGTLLHTNLRVKMDAQQKPMVYPYYGLEQD
NANEGQPSTMKRRGKRELDKEVIGSKVYLEIDNRKCAQSSVDCFSSTDLAASFIAAEYLK
SALPYPVVSVNSDPTEPHKPPFLLYLAVGAAVIILLILVLGVMAAKRKRKHGVLWLPDGF
LAKKDDKRREPVGQDDFGMKNFKTQDGGMMDGGQSQRWMEEEAPPKKPRTEDKPLLPMGV
DGGVDRREWTLQHHKAADISLTPPQTDLEADCLDVNVKGPDGFTPLMLASLRNGGASDCG
LQAEEEEESGGDEPGPNAISDLITQGATLMAQTDRTGETALHLAARYARADAAKRLLDAG
ADANAHDNMGRTPLHAAVAADAQGVFQILIRNRATELDARMNDGTTPLILAARLAVEGMV
EELVHCHADINAVDDHGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEETPLFLAARE
GSFEAAQVLLDHCSNRDITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHNNHMGGGH
SSLVCGGNGAGYMGMRPGPQGKKSRRKVGGVGGATAKELKDMKAKRRKKPTGGEGPAVGG
ASGNGTKAAGGLSESSVTMSPVDSLESPHSYTGDAAGASKTTNSPPLLGCPSSGPLLPPV
SHMLGQQHSWVGLKHGYGGHMFSLLPQQMGNGHPGMSQHHGQGLLTPMNVTMSREQLPPI
VTFQMMAPGSGQALLKQPQPGQVQSQRQNQGQPQSQQGPTHLHCTHGMMYQMPNVGLQHS
LSHSLPHPHSHDLAHGHGMVQDGQSRQQLPPYQAMQSPVDKYPTPPSQHSYATASSEGTT
PGHPAHPPSEHPYLTPSPESPDPWSSSSPHSNSDWSDVTTSPTPLGNPHALPPLRHTHIP
EQVQLQPQSQQTQQNPQQPQRGNMQVFA
NT seq
7467 nt
NT seq
+upstream
nt +downstream
nt
atgggccaattacccgttttctcttcgggcaaagtattagtcatcgtcgtctgctgcgtt
cgactttctttggctctccagtgtcttgatgctgttaagccgtgtgtgaacaatgctacg
tgtgccaccttcaccaacgggacaggatactgcaggtgtgccgcaggcttcctaggtgat
tactgccatcacaaagacccgtgtcaccctggttactgtctgaatggggggaattgctct
gtggctgtgtcgggcattccgggcagccctacctgctcctgtcccctgggctacactggg
cagcactgccagaccccccagaactccacctgctaccccaacaacccatgtgccaaccga
ggggtctgcaccctgctctccctcgacaagtacaagtgccggtgtgcccacggatggaca
ggcatgcgctgtaatcgtgaggacagctgtctgtcaggaccctgtgctaacggaggcacc
tgcagctctctgtctgggggaaagttcagctgtacctgtcctccaggctactggggtccc
cgctgcctcaacgacactgatgagtgtgctgcctccaccccggtgtgtcagaacgaaggg
gtgtgtgtcaacacccctggctcctacaggtgtaactgcgcccccgggttcactggccgc
caatgtgagaccccctacatcccctgctccccctcgccctgcctcaacgggggcacatgt
cgcccaacctctgagaccagctactggtgccactgcctgccaggcttcaatgggactaac
tgtgagaacaacattgacgactgccccgaccatcactgccaaaatggagggacctgcatg
gacggtgtcaatacctacaactgccaatgccccccggaatggactggtcagttctgtacc
gaggatgtggatgagtgtcgcctgcagcccaacacatgtcagaacgggggtacctgcagc
aacatccagggcagctacacctgtgtgtgtgtcaacggctggagtggcctggactgctct
gagaacatagatgactgtgctacggctgcctgcaccaagggctccacctgtatcgaccgt
gtggcatccttcctttgtgtctgcccctatggaaaaactggtttgctgtgccacgtgaac
gatgcctgcatcagtagcccgtgccgggacggggcgcagtgcgacaccaaccccatcaac
ggcatgttcaactgcaactgtgcccccggctacataggaagcacctgcaatgacgacatc
aacgagtgcatcataggtccaaacccctgtgagcacggaggattgtgtgtgaacacagac
ggctcgttcacatgtaactgtgcaagaggttatggtgggccgcgctgtgagacagacatc
aatgagtgtgtgtccagcccttgccagaacgacggcacctgtctggaccgcataggagac
tacagctgcatctgtatggaaggatttgagggaacacactgtgagattgacatcaatgag
tgtgcaagctctccatgtctgaaccaagggacctgtctagatcaagtcaaacgttacgtc
tgccagtgccctctaggattcagtggggagatgtgtcagatcgacattgacgagtgttcc
agcacaccatgcctcaacggggccaagtgtatcgaccgtcccaacggctacgagtgtgaa
tgtgctgaaggcttctcagggccgttgtgtaaggagaacatagatgactgtgacccggag
ccctgtcaccacggggtgtgtcgtgacggcatcgccaccttctcctgtgactgtgacccg
ggctacaccggctccatctgcaacgtccaggtcatggagtgctacagcaacccctgccag
aaccgtggacgctgcatcgacctggtcaacaagtaccagtgcaactgtctgcctggcacc
tcgggggtgaactgtgagatcaatgttgatgactgcgccagtaacccctgtgaatatgga
gagtgccaggacgggatcaacaagtacaagtgtgtctgtgctccaggatacacaggtgca
aaatgtaacgtggacatccatgagtgtaattccagcccgtgtatgagtgggggtacgtgt
gtggacaaggtaaacggcttcatctgccagtgcccccctggcacccacggccccctgtgc
cactctggcaccgaccactgtgctccccagccctgtgtacacggagactgtgtagagcag
cagagcgggtaccactgtgagtgtgagtctggctgggtggggcaacactgtgaccaggag
aaggatgagtgccagtccagcccctgccagcacagtggcacctgtgtggacagactcaac
ggatactcttgccagtgtcgccccggattcacaggtgtgaactgcgaagtcaacatagat
gagtgtgcatcaaacccgtgtgagaaccatggtacctgtgtggacggagtcaacagctac
agctgccagtgtgatcctccgtactccggaaaacactgtgaggaggagttggttccctgt
gcgtctcatccatgtgagaggggaggtgtgtgtcagccaaccccagactacacctcttac
acctgtaaatgtcccagcggctggcaaggcttccgctgcactgaggatgtggatgagtgc
aggaagaacccgtgtcagaacagggcccgttgcatcaacagccagggtagctacgtgtgc
aagtgtcaaccaggctacagcggcctcaactgccaaaccaacattgatgactgctccccc
aacccgtgtctgaacggcggttcctgtgtggacgaagtgggagggttctcctgtgactgc
cggccagggtttggtggtgagcactgtgaggcagaagtggatgagtgtgccagtcagccg
tgccggaatggagctgtgtgccgggactacgtcaacagctttgtctgtgtgtgccgacca
ggtttcgacggaatcctctgtgaacacaacatcccagaatgcactgagagttcctgtctg
aataacgggacctgtgttgatgacatcaacaccttctcgtgtcgttgtcgtcctggtttc
tacgggaccttctgtcagtatgagcagaatgagtgtgactctcagccctgtaagaacgga
ggaacctgcactgatggcctgggctcctaccactgcacctgccctgtaggctacaatgga
cagaactgccagaactttgtgaacctgtgtagccagccactgtgccagaatggagggtcc
tgttcccagtcagagaccacctggttgtgtcactgtcctgtgggctggactggcatgtac
tgtgatgtccccaacatgtcatgtcaggactatgctgctcggaacggtatccaagtggag
ttagtgtgtaagcactcgggtcgctgcgtggacgtgggtaatgcccaccagtgtcagtgc
ctgcctggttacacaggcagctactgtaacgagatggtggacgagtgcctttccaacccc
tgccgcaacggggccacctgcatggactaccagggcacatatgagtgtatgtgcaaggct
ggctaccagggggtgaactgtgaatatgacgtggatgagtgtcactctaatccttgtcac
cacggaggaacctgcatcaacctcatcaaccacttctcctgcgcctgcccacctggcaca
catggtgttcagtgtgaggtgaatgtggacgactgtgctcccaagcgtggctcctggggg
cctcgctgtctgaacgggggccagtgtgtggacggagtgggccgctacacctgctcctgc
ccccctggcttcgctggggagcactgtgagggggacgtcaacgagtgtctctctggaccc
tgccactctcctggtagcctggactgtgtgcagctggccaatgactaccagtgccgctgt
cgcctgggctacacaggacgccactgtgagtccatggtggacctgtgccagtcgaagccg
tgccataacagtggcacctgctccatgaacatgagctcagtacatggatacacatgcatc
tgtcaaccaggcttcactggcttcaactgtggagaggtggagggctacaactgtgccaag
ctgcgttgcaagaacggcgggcactgccaggagtctcagggtggtcgtccacactgccgt
tgccagccaggcttcagtgggccgcactgcgagaccgtccagggctgccagaaccagccc
tgtctgaacggaggcaactgtatgaaggacctaaacgacccctaccagtacagctgtcac
tgcccatcccacttctcaggcaggcactgtgagaatgtcatcttcggtccgtccccccgc
acccccgcctcctgcccctacgtagagtgtgagcagcattccggggataaggtgtgtgac
ccgcagtgcaacagccatgagtgccaatgggacggaggggactgttctctacattggcac
cggccatgggtcaactgcaccgcccctgtgccctgctgggagctgttccgcaacggccgc
tgtgaccccgagtgtgacaactctggctgcctcttcgacagctttgagtgtcaggagagc
gcacagtcttactgcaaatatgataactactgtgcggaccactatgccaacaagatctgt
gacaagagctgtaacacgaaggcatgtgtctgggacggcctggactgctctggggacacc
cctgctaaggtcgctgacggcacgctggtgatcgtagtgttactgcagcctgaggagctg
ctgggagacgtgagaggcttcctgcgctccctgggaaccctgctgcataccaacctccgg
gtcaaaatggacgctcagcagaaacctatggtgtatccgtactacggcctggagcaagac
aacgccaatgaaggacagccttctacgatgaagcgtagaggcaaacgggagctagacaag
gaggttatcgggtctaaggtgtacctggagatcgataaccgtaagtgtgctcagagctcc
gtggactgcttctccagcacagatctggctgcatccttcattgctgccgagtacctgaag
tctgcgctgccctaccctgtggtctctgtcaacagtgaccctacggaaccccataagccc
ccgttcctgctgtacctggctgtgggagcagccgtcatcatcctgctcatcctggtgctg
ggcgtgatggccgccaagaggaaacgcaaacacggtgtcctctggctccccgatggcttc
ctggccaagaaggacgacaagaggagagaacccgtgggccaggacgacttcggcatgaag
aacttcaagacccaggatggagggatgatggacggaggccagagccagaggtggatggaa
gaggaggctccgccaaagaaaccgaggactgaggacaagcccctgctgcccatgggtgtg
gatggaggagtggacagacgggagtggaccctgcagcaccacaaggctgctgacatctct
ctcactccaccacagactgatctggaggcagactgcctggatgtcaatgtcaaaggacca
gatggcttcacccccctgatgctggcctctctacgaaacggaggggcgtctgattgcggc
ctgcaggcggaggaggaggaggagagcgggggagacgagccgggacccaacgccatctca
gacctcatcacccagggtgcaacactcatggcccagacggaccgcaccggggagacggca
ctccacctggccgctcgctacgcccgggccgacgccgccaagaggctgctggatgccggg
gcagacgccaacgctcacgacaacatgggtcgcacccctctccatgctgctgtggcagct
gatgcccagggagtgttccagatcctgatccgtaaccgggccacggagttggatgccagg
atgaacgatggcaccacacctctgatcctggctgccaggctggctgtggagggcatggtg
gaggaactggtgcattgccacgctgacatcaacgctgtcgacgaccacggtaaatctgct
ctgcactgggcagctgctgtgaacaacgtggaggccactctggtgctgctaaagaatgga
gccaacagagacatgcaggacaacaaggaggagaccccgttgttcctggcagccagagag
ggtagttttgaggcggcccaggttctgctggaccactgctctaatagggacatcacagac
cacctggaccggctgccccgcgacaccgcacaggagcgcatgcaccacgacatcgtacgt
ctgctcgaccagtacaacctggtccacagccctcacaacaaccacatgggtgggggacac
tcctccctggtctgtggaggcaacggcgctggctacatgggcatgcgccccggaccccag
ggcaagaagagcaggcgcaaggttggaggggtgggtggggccacagcaaaagagctgaaa
gacatgaaggccaagcgtaggaagaagccaacaggaggagaagggcctgcagtgggagga
gccagtggcaacggcactaaagctgcaggagggctgtcagagagctcagtcaccatgtcc
cctgttgactccctggagtctccacactcatacacaggagatgctgccggggcctccaaa
acgaccaactctcctcctctcctgggctgcccctcctccgggcctctgctgcccccagtc
agccacatgctgggccagcagcatagctgggtgggcctgaagcatggctacggtggccac
atgttcagcctcctcccccagcagatgggcaacggccatcctggcatgtcccagcaccac
ggccaaggcctgctcacccctatgaatgtcaccatgagccgcgagcagcttcctcccatt
gtcaccttccagatgatggcgccggggagcgggcaggccctgctgaagcagccccagcct
gggcaggtgcagtcacagaggcaaaaccagggccagccccaatctcagcagggccctact
catctgcactgcacccatggcatgatgtaccagatgcccaacgtgggcctccagcacagc
ctgtctcacagcctccctcacccccactcgcacgacctggcccacggccacggcatggtg
caggatggccagtcccgccaacagctccctccctatcaggcaatgcagagccccgtggat
aagtacccaacccctccctctcagcacagctacgccacggctagctcggagggcaccacc
ccggggcacccggctcacccgcccagcgagcacccttacctcaccccctcccctgagtcc
cctgacccctggtcctcctcctccccccactccaactcagactggtctgacgtcaccacc
agccccacccccctggggaacccccatgcactgcctcctctccgccacacacacattccg
gagcaggtgcagctgcaaccgcagtcccagcagacacaacagaacccccagcagcctcag
cgtggcaacatgcaggtgtttgcatag
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integrated database retrieval system
