Coregonus clupeaformis (lake whitefish): 121540303
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Entry
121540303 CDS
T08357
Name
(RefSeq) vesicle-trafficking protein SEC22b-B isoform X1
KO
K08517
vesicle transport protein SEC22
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04130
SNARE interactions in vesicular transport
cclu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121540303
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121540303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121540303
Membrane trafficking [BR:
cclu04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
121540303
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
IMD
Motif
Other DBs
NCBI-GeneID:
121540303
NCBI-ProteinID:
XP_041705009
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Position
26:20476820..20482448
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AA seq
218 aa
AA seq
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MVLLTMIARLADGLPLAASMQEDEQGSEKLGRDLQQYQSQAKQLFRKLNDQSPTRCTLEA
GSMSFHYVIEKGVVYLVLSEASFPKKLAFAYLEDLQAEFHEQHGKKVPTVSRPYSFIEFD
TYIQKTKKSYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSL
SKKYRSDAKYLNTRSTYAKLAAGGVFLMLIVYVRFWWL
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgctgacaatgatcgctcggttggcggatggactgccgctggccgcatcaatg
caagaggacgaacagggaagtgagaagttgggtcgagacctgcaacagtaccagagccaa
gctaaacagctgtttaggaaactcaatgaccagagtcccacacgttgcacattagaggct
ggctccatgtccttccactacgtcatagaaaaaggagtagtctacctagtgctgtctgaa
gcaagctttcccaaaaaacttgcctttgcttacctggaagacctgcaggcagagttccat
gaacagcacgggaagaaagtccccactgtgtctcgaccgtactccttcattgagtttgac
acctacattcagaagaccaagaagtcgtacatagacagccgagcccgtaggaacctgggc
agcatcaacacagagctgcaggatgtccagaggatcatggtggccaacattgaggaagtg
ttgcaacgaggggaggccttgtctgctctggactccaaggccagtaatctgtccagcctg
tcaaagaagtacagaagtgatgccaagtacctgaacactcgctccacctacgctaagctg
gccgccggaggggtcttccttatgctcattgtctacgtccgcttctggtggctctga
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