Coregonus clupeaformis (lake whitefish): 121540337
Help
Entry
121540337 CDS
T08357
Name
(RefSeq) transducin-like enhancer protein 1 isoform X1
KO
K04497
groucho
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04310
Wnt signaling pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121540337
04330 Notch signaling pathway
121540337
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121540337
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
121540337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TLE_N
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
WD40_RFWD3
HALZ
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
121540337
NCBI-ProteinID:
XP_041705068
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MFPQNRPPAPLQPPPGSSASAAAAAAAAAAASGAPQALKLTYPETLDRIKEEFQFLQTQY
HSLKMECEKLATEKTEIQRHYVMYYEMSYGLNIEMHKQTEIAKRLNVICAQLIPFLSQEH
QQQVVQAMERAKQVTMGELNASIGVRGLPPLPHTQQLQAQHLSQHVAQGLQGLHSMQMGP
HPGGLPHPGLALGGGSGLLALSGALGAQLAAKEGHERAHLEAAAAAAAAEHHRGWLRGRG
AMLPIMDVDREAGPSSMSNGDKGRSADYLSNGKKRRADEKEFMTDYGSDADKSDDNLVVD
EDPSSPRSVHSYSSRENGLDKLPPSRKDAPPQASPASLASSSSQASPSRSKDREPPREKS
STPGMKPGTPHGSQDSSTPGPSAPPQFRPVPGKPGIDPLALGLRNPLAVQGAYPPGAFGL
PPPGVNGELAGAAAAYGAGLHLVSPQMNGSAAAAAAAGYGRSPVVGYESPHPHMRVPGLP
ASLQSAASGKPAYSFHVSADGQMQPVPFPPDALLGPGIPRHARQIHTLNHGEVVCAVTIS
TSTRHVYTGGKGCVKVWDISQPGSKSAMAQLDCLNRDNYIRSCKLLPDGRTLIVGGEAST
LSIWDLATPTPRIKAELTSSAPACYALAISPDNKVCFSCCSDGNIVVWDLHNQTLVRQFQ
GHTDGASCIDISNDGTKLWTGGLDNTVRCWDLREGRQLQQHDFTSQIFSLGYCPTGEWLA
VGMESSNVEVLHVSKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGSSI
FQSKETSSVLSCDISPDDQFIVTGSGDKKATVYEVIY
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctcaaaaccgacctccggcacctcttcagccaccccctgggtcttcggcgtcg
gcggcggcagctgctgctgcggcggctgcagcctcgggagccccccaggccctgaagctc
acctacccagagaccctggaccgcatcaaggaggagttccagttcctccagacccagtac
cacagcctgaagatggagtgtgagaaactggccaccgagaagactgagatccagagacac
tatgttatgtattacgagatgtcctacggccttaatattgaaatgcacaaacagacggag
atcgccaagcgcctgaatgtgatctgtgcccagctcatccctttcctgtcacaggagcac
caacaacaggtggtccaggccatggagcgcgccaagcaggtgactatgggggagttaaat
gcgtcgataggggtacgtggactccctcctctacctcatacacaacagctgcaggcgcag
cacctctcccagcacgtggcccagggtctgcagggtctgcacagtatgcaaatggggccc
catcctgggggcctccctcaccctggcctggcgctgggcggagggtctggcctcttggct
ttgtctggggccctgggggcccagctggctgccaaggagggccacgagagggcccacctg
gaggctgccgctgctgcagccgccgcagagcaccacagaggctggctgcggggacgcggg
gcgatgctgcccatcatggacgtagaccgtgaggctggaccgagctctatgtccaacggg
gataagggccgttcagcagactacctcagcaacgggaagaagaggagggcagatgagaag
gagttcatgacagactatggcagtgacgcagataagagtgatgataatttggtggtggat
gaggacccctcgtccccccgcagtgtccactcctactcgtccagagaaaacggcctggac
aagttgcccccgtcccgtaaagacgcccctccccaggccagccccgcgtccctggcctcc
tccagcagccaagcctccccctcccgcagcaaggaccgggagccaccgagggagaagtcc
agtaccccaggtatgaagccaggcaccccccacggttcccaggactcctccacccccggc
cccagtgcccccccacagttccgccccgtccctggcaaacctggcattgaccctctggct
ctgggtctgaggaatcctctggcggtgcagggagcgtacccccccggggcgtttggcctg
ccccctccaggggtgaacggggagctggcgggggcagcagcagcctatggggcggggctt
cacctggtctccccccagatgaacggctctgcagccgccgccgctgcagccggatatgga
cgatcaccagtggtgggctatgagtctcctcacccccacatgagggtcccagggttaccc
gccagcctgcagtccgctgcctcagggaaacctgcctactctttccatgtaagtgcggat
ggacagatgcagccggtgcctttccctccagatgccctgctgggcccgggcatcccgcgg
cacgcccgtcagatccacacactgaaccatggagaggtggtgtgtgccgttaccatcagc
acctccacacgccacgtctacaccggcgggaagggctgtgtcaaggtgtgggacatcagc
cagcctggaagcaaaagtgccatggcccagctcgactgtctgaatagggataactacatc
cgctcctgcaaactcctccccgatgggcggaccctcatcgttggaggcgaggccagcaca
ctgtcaatctgggacttggccacacccactccccgcatcaaggcggagttgacgtcgtct
gccccggcctgctacgctctggccatctcccccgacaacaaggtctgcttctcctgctgc
agcgacggaaacatcgtagtctgggacttgcacaaccagaccctggttaggcagttccag
ggccacactgacggggccagctgtattgacatctccaacgatgggaccaaactgtggacg
ggggggctggacaacacagtacgctgctgggacctgagagagggacgacagctgcagcag
cacgacttcacctcacagatcttttctttgggctactgtcctacaggagagtggctggca
gtgggtatggagagcagtaatgtagaagtgctgcatgtctccaaaccagacaagtaccag
ctgcacctccacgagagctgtgtgctgtcactcaagtttgcctactgtggtaaatggttt
gtgagcacaggcaaagataaccttctgaacgcatggcggacaccctatggatcaagcata
ttccagtcaaaggagacgtcttcggtgctcagctgtgacatctctcctgatgaccagttc
attgtgacgggctcgggtgacaagaaggccactgtgtatgaagtcatctactga
DBGET
integrated database retrieval system
