Coregonus clupeaformis (lake whitefish): 121540368
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Entry
121540368 CDS
T08357
Symbol
hmg20b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X1
KO
K24650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121540368 (hmg20b)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
121540368 (hmg20b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF4763
PI3K_P85_iSH2
MlaC
DUF4164
Motif
Other DBs
NCBI-GeneID:
121540368
NCBI-ProteinID:
XP_041705129
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All DBs
Position
26:41686909..41693634
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AA seq
317 aa
AA seq
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MEIWPSGKPNPIKINHWDNDIMGGVKQEQNDGPPPRGMQSSDAAQEEPVKKRGWPKGKKR
KKVLPNGPKAPVTGYVRFLNERREQIRAKHPDLPFPEITKRLGAEWSRLAPHDKQRFLDE
AEREKLQYARELREYQQSEAYQITSAKIQDKKVKREESPSVIINANSSGSAALKGSDHLS
NRFDVPIFTEEFLDQNKVREAELRRLRKANVEFEEQNAVLQKHISDMYSAKERLEAELGQ
DELRTQALHRHLLAIKHTLVSSLSTVALPGTGETPSLGTLDSYLSRLSGTLESNPHEHRV
LLAQLRDVLSHLDSEKL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatggccgtctgggaaacctaaccctataaagatcaatcactgggataacgat
atcatgggaggtgtgaagcaggagcagaatgatggacctccaccaagaggcatgcagtcc
tcagatgcagcacaagaagagcctgtgaagaagagaggttggcccaagggtaagaagaga
aagaaggtgttgcccaacggtcccaaggcaccagtgacaggatatgtgcgcttcctgaat
gaacggcgggagcagatccgtgccaagcacccagacctgccctttccagaaatcaccaag
aggctgggcgcggagtggagccgcttggcacctcatgacaaacagcgcttcctggatgag
gcggagcgagagaagctgcagtatgcccgggagttgagagaataccaacaaagtgaggcc
tatcagatcaccagtgccaagatccaggacaagaaggtcaagagagaggagtctccatct
gtcattatcaatgctaacagttctggatcagctgctctgaagggttcagatcatctgtcc
aacagatttgatgttccaatatttacagaggaattcctggaccagaacaaggtccgggaa
gcggagctgcggcgtttacgcaaagccaacgtggagttcgaggagcagaacgcagtgttg
cagaagcacatttcagacatgtacagcgctaaagagagactggaagctgaactggggcag
gatgagctccggacgcaggctctgcacaggcacctgctggccatcaaacacaccctcgtc
agcagcctgtccactgtggccctgccaggcacaggtgaaaccccctctcttggtaccctg
gactcttacctgagtcgcctgagtggtactctggagagcaaccctcatgagcaccgtgtt
ttgctggctcagctccgtgatgtcctttctcacctggacagtgagaaactatga
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