Coregonus clupeaformis (lake whitefish): 121540372
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Entry
121540372 CDS
T08357
Name
(RefSeq) CUGBP Elav-like family member 5 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121540372
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121540372
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
121540372
NCBI-ProteinID:
XP_041705135
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Position
26:complement(41167103..41510714)
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AA seq
553 aa
AA seq
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MARFTQTETRRQQQSQQPHPAHTSLVFTGPGVPPTEQQLLLIPHQHQYSQITFAKPMNGS
ESISIHPESGNMKDQDAIKLFVGQIPRNLEEKDLNPLFEQFGKIHELTVLKDRYTGMHKG
CAFLTYCARESAIKAQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEE
DVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHAEAQSAISALHGSQTMPNGSDSLP
PQGASSSLVVKFADTDKERTIRRMQQMVGQFGIFNPAIALPFSTYSTYAHAALLQHDNEL
MQQQAAIMAASHGGYLTPSVAFPATQIHQMGALNINGLPHNSMTPVSAEFHQALGEQWVS
FPLGLSSPPANITTPSIVTPIVNSFTGIPHHQPNGHPTVETMYTNGLSPYTTQSPTAADT
LQQAFTGVQQYTAIYPAGTLTPIGQTLPQPSQGIQQQQQREGEGPEGCNLFIYHLPQEFG
DNELMQMFLPFGSVISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLK
VQLKRPKDASRPY
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggccagattcactcagactgaaacaagaaggcagcagcaatcacagcagccccatccc
gctcacacaagcctagttttcactggacctggggtaccaccgaccgaacaacaactacta
cttatccctcaccagcaccagtactctcagatcacatttgctaaacccatgaacgggtca
gaatccatttccattcatccggagagcggcaatatgaaagaccaagatgccataaagctg
tttgtcgggcagataccgcggaacttagaggaaaaggacctgaatcctctgtttgaacag
ttcggaaaaatccacgaactgactgttctaaaggaccgatacaccggcatgcacaaaggc
tgtgcgttcctcacctactgcgcccgcgagtcggccatcaaagcccagaacgccctccat
gaacagaaaacactgccagggatgactcgccccatccaggtgaagccggctgacagtgag
agccgtggagaagacaggaagctgtttgtggggatgctgaacaaacaacagactgaggag
gacgtgtaccgcctctttgagccctacggagtcatcgaggagtgcaccgtcctaagaggt
cctgacggaaacagcaaaggctgtgcctttgtaaagttctccacacacgctgaggcccag
tctgcaatcagtgccctccatggcagccagaccatgccaaacggctccgattctctcccc
ccccagggcgcgtcctccagcctggtggtgaagtttgcagacaccgacaaggagcgcacc
atccgccgcatgcagcaaatggttggccagtttggcatcttcaacccagccattgccctg
cccttcagcacctacagcacctacgcacacgcagcactgctgcagcatgacaatgagctc
atgcagcaacaggcagccatcatggcagcgagccacggaggctacctgactcccagcgtg
gccttccccgccacccagattcaccagatgggggcgctcaacatcaatggtctcccacac
aactccatgaccccggtgtcggctgaatttcatcaggcgctgggtgagcaatgggtttca
ttccctttgggcctcagctctccaccagccaacatcaccactcccagcatcgtcactccc
atcgtcaacagcttcacgggtatcccccaccatcagcccaacggacatcccaccgtggag
accatgtacaccaatggtctctcgccctacaccacccagagccccaccgccgcagacacc
ctccagcaagccttcaccggagtacagcaatacacagctatctacccagcaggcacactg
actcccataggccagactcttcctcagccatcacagggcatccagcagcagcaacagaga
gaaggtgaggggcccgagggctgtaacctgttcatctaccacctgccacaggagtttgga
gataatgaactcatgcagatgtttctacctttcgggagcgtcatctcctccaaggtcttc
atggaccgagccaccaaccagagcaaatgtttcgggtttgtgagcttcgacaacccagct
agcgcgcaggcagctattcaagccatgaatggctttcagattggaatgaagaggttgaaa
gtccagttaaaacgaccaaaggatgccagccgtccttactga
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