Coregonus clupeaformis (lake whitefish): 121540394
Help
Entry
121540394 CDS
T08357
Name
(RefSeq) rho guanine nucleotide exchange factor 18-like
KO
K21066
A-kinase anchor protein 18
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121540394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121540394
Membrane trafficking [BR:
cclu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121540394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
PH_13
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
121540394
NCBI-ProteinID:
XP_045063675
LinkDB
All DBs
Position
26:13043597..13130583
Genome browser
AA seq
1062 aa
AA seq
DB search
MTLTPRGPSAQPAASNSSSSSHSHTAGASLNLNHSHNSSSGSLPGDMDETDSLRFGIKRF
NEDAVSLAPSTTDSIIVEDAYYSAVRADLESDAQDLDVESWSLAVDQQYLKKHTKEMVKR
QDVIYELMQTEMHHVRTLKIMLHVYVRELKEHLQMDERCLDCLFPRLESLLELHTHFLSR
LKERRRDAMQPGSDKNYNIQRLADILTTQFSGELGERMKESYGDFCSHHTEAVNYYKEQL
HNNKKFQNLIRKINNLSIVRRLGVTECILLVTQRITKYPVLVERIVQNTEVGTDEHEELT
RSLSLIKDCIVQVDALVNLHQKASRLRDIAHKMEPKSLGKVKDGRVFRGEDLTLGRPRLL
HEGTVNHKAASGRLKDILAVLLSDVLLLLQEKDQRYVFSTVDNKPSVISLQKLIVREVAH
EEKAMFLICASSNEPEMYEIHTASKEERNTWMTHLRQAVESCPQTERLFSEEEEARAARF
KEFQERLSQKDGQIVAGLTEKLQLFADMAESVAGLEDMASRSCLLLRGDASDLHQGETLL
KGAITEVENLQNMLLSGVRELAPRPEEGLGSGAMPRRAGTFGGYDSSPTILNKKGSVKKK
NYSGGDRDRSQRARSDPQLKEIQTSQALEQPPAADNDEASPAIWNPIWSNTFPEAEFFDL
VLMLSQRLYSLQAIICQQDSHIELQRASLKERASFPGRHRGNVLLEQEKQRTLALQREEL
ASFHKLQSQHRQEQARWERERERHRQQAEAAEGKLRQREEECRRQEEKLAEEREELERQR
EMYQQDLERLRESTRTVEKEKERLEQQRKIKRKTIEVVPLSGSLNGDLLLGMGGRGVGGS
DLSRTLPLPQKALVRPSLSGVPADYLEHPEVPPRGQSVNATVLPVKKEVPLHLCSTTNQQ
HKQFGVQQQIPTKLAALSSKSSKNCKGKASHRTDSTASVDMKQMLPMKLSAREDGTLKAK
CSISPHQRHPLTHSQSLHFTDSVIHPDSGPENQPSSTHLVCLQKPPSQTSNPLHTQPQAP
NRLHTQSPNPSSAQAPVHGLSHSQPPPYRITEDLNKEDVIFF
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcaccccgcggggacccagtgctcagcctgccgcctccaacagctcttcctcc
agccacagtcacactgctggagccagcctcaacctcaaccacagccacaacagcagctct
ggatccctcccaggggacatggacgagacggacagcctccgcttcgggatcaagcgcttc
aacgaggacgcggtgtctctggccccttccaccactgactccatcatcgtagaggatgcg
tactactctgcggttcgagctgatctggagtcagatgcccaggacttggatgtggagtca
tggagcctggctgtggaccaacagtacctgaagaaacacaccaaggagatggtcaagaga
caggacgtcatctacgagttgatgcagacagagatgcatcacgtacggaccctgaaaatc
atgctgcatgtgtacgtgagggagctgaaagagcaccttcagatggatgagcggtgtctg
gactgtctgttcccgcgcctggagagcctgctggagctgcacacacacttcctttcccgc
ctcaaagagcggcgccgagacgccatgcagcccggcagcgacaagaactacaacatacag
agactcgctgacatccttaccacacagttttcaggtgagttaggggaacggatgaaggag
agctatggtgatttttgtagccaccacacagaggctgtcaattactacaaggagcagctg
cacaacaacaagaagttccagaacctcatacggaaaatcaacaatttgtccattgtgaga
agattaggagtgacagagtgtattctactggtgactcagcgcatcacgaagtacccagtg
ctggtggaacgcattgtgcagaacacagaagtgggcacggacgagcacgaggagctgacg
aggtctctgagtctgatcaaagactgcatcgtccaggttgatgccctggtcaacctccat
cagaaagcctcgcgcctccgagacatcgcccacaagatggagcccaagtccctgggcaag
gtcaaagatggccgtgtcttccgcggagaggacctgactctgggcagacccaggctgctg
cacgaggggaccgtcaaccacaaggctgcctctggcagactcaaagatattctcgctgtg
ctgctgtcagatgtcctgttgttactccaagagaaagaccagagatatgtcttctctact
gtggacaacaagccatcagtgatctccctccagaagttgatagtgagggaggtggcccac
gaagagaaggccatgttcctaatctgcgcctcctccaacgagcctgagatgtacgagatc
cacaccgcctccaaggaggagcgcaacacctggatgacacacctccgccaggcagtggag
agttgtccacaaacagagaggctcttcagtgaggaggaggaggctcgagccgccagattc
aaagagttccaagagcgtctgagccagaaggatggccagatcgtggcaggtctgacagag
aagctgcagctgtttgcagacatggcagagtctgtggctggtcttgaggatatggcctca
cgctcctgtctgctgctgcgtggtgatgcctcagacctccaccagggggagacgctgctc
aagggagccatcactgaagtggagaaccttcagaacatgttgctgtctggtgtgagagag
ctagctccacgtccagaggagggtttaggctccggggctatgcccaggagagcaggcacc
ttcgggggctacgacagcagccccaccatcctcaacaagaaaggcagtgtgaagaagaag
aactacagtggaggggacagagacaggagccagagagcccgctctgacccccagctcaag
gagattcagaccagccaggccctggagcagccaccggctgctgataatgatgaggcctct
ccagccatctggaaccccatctggtccaacacctttccagaagctgagttctttgacctg
gtgctgatgctgtctcagagactctacagcttgcaggccatcatctgccagcaagacagc
cacatcgagctacagcgcgcctccctcaaagagcgtgcctccttccccggccgtcaccgt
ggcaacgtgctcctggagcaggagaaacagaggacgctggccctgcagagggaggagctg
gccagcttccacaagctgcagtcacagcaccgacaggagcaggctcgctgggagagggag
cgggagcgccaccggcagcaggcagaggccgcggagggcaagctgaggcagagggaggag
gagtgcaggaggcaggaggagaagctggcggaggagagggaggagctggagagacaaagg
gagatgtaccaacaggatctggagagactgagggagtcaacccgcaccgtggagaaggag
aaggaacgcctggagcagcagaggaagatcaagaggaagacaatcgaggtggtgccacta
tccggcagtctaaatggggacctcctgctgggcatgggcggtcgcggtgttggcggttca
gacctctcccgcaccctccccctgccccagaaggccctggtgcgccccagcctctcgggg
gtgcccgcagactacctggagcatcccgaggttccgccgcggggtcagagcgtcaatgcc
accgtgttgccggtgaagaaggaggtgccgctccacctgtgcagcaccaccaaccagcaa
cacaagcagtttggcgtccagcagcagatccccaccaaactggcagcgctgagctcaaag
agctccaagaattgcaagggcaaggcctcgcaccgcaccgacagcacagcctctgtggat
atgaagcagatgctgcctatgaagttgtcagccagagaggacggcactctgaaagccaag
tgctccatcagtcctcaccagaggcaccccctaacccactcccagtccctgcacttcaca
gattcagtgatccatccagacagtgggccagagaaccagccctcctccacccacctggtc
tgcctacagaagccccccagccagacctccaatcccctccacacccagccccaggctcct
aaccgcctccatacccagagccccaacccctcttcagcccaggcccctgtccacggcctc
agccacagccagccccctccatacaggatcactgaggacctgaacaaggaggatgtcata
tttttctaa
DBGET
integrated database retrieval system
