Coregonus clupeaformis (lake whitefish): 121540417
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Entry
121540417 CDS
T08357
Name
(RefSeq) beta-1,3-galactosyltransferase 2-like
KO
K07820
beta-1,3-galactosyltransferase 2 [EC:
2.4.1.86
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00601
Glycosphingolipid biosynthesis - lacto and neolacto series
cclu01100
Metabolic pathways
Module
cclu_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
121540417
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121540417
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.86 N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase
121540417
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
Type 1 chain
121540417
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Galactosyl_T
B3GALT2_N
Motif
Other DBs
NCBI-GeneID:
121540417
NCBI-ProteinID:
XP_041705205
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All DBs
Position
26:15944560..15961571
Genome browser
AA seq
433 aa
AA seq
DB search
MQWRRRHCCPIKMTWTMKRSLFRTHVAGLLSLALLFTLFLFFSHQDWLPGRTGPRDNPLA
YTVRGFRTAKAEANQSLSLKSLWRETGFVPPKPQLNLSSQQAEGGGGGGAMVGVTGLENS
MSANNSLQQEMGVGGRLNAQPYRYILNEPFKCRDSTPFLVLLIAAEPGQADARNAIRQTW
SNESVAMGLGFVRLFMLGLGRSSDRYTQTAIEEESRVYHDIIQQDYQDTYYNLTIKTLMG
MNWVACHCPQAHYVMKTDSDMFVNTEYLIQKLLKPELPPRQSYFTGYLMRGYAPNRNKDS
KWYMPPELYPSERYPIFCSGTGYVFSGDMAERIYQASLSIRRLHLEDVYVGICLAKLRID
PTPPPNEFLFNHWRVSYSSCKYSHLITSHQFQPNELVKYWNHLQTNKHNACINMAKERNG
RYRHRKYHAETPQ
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcagtggagacggcgacactgctgccccatcaagatgacctggaccatgaagcgctcg
ctcttccggacccatgtggcaggtctcctgtccctggccctcctcttcaccctcttcctc
ttcttcagccaccaggactggctgccgggccggaccgggccccgtgacaaccccctggcc
tacaccgttaggggcttccgcacggccaaggccgaggcaaaccagagcctgagtctgaag
agcctgtggagggagacaggttttgtgcctcccaagccccagcttaacctcagctcccag
caggctgagggtggcggtggtgggggagccatggtgggcgtaacgggtctggagaactcg
atgagcgccaacaacagtttacagcaggagatgggcgtgggagggaggctcaatgcccag
ccctaccgctacatcctcaacgagcccttcaagtgccgggacagcaccccgttcttggtg
ctgctgatcgctgcagagccaggccaggcagacgccaggaacgccattcggcagacatgg
agcaacgagagcgtggccatgggcctaggtttcgtccgactcttcatgctgggtctaggg
cggagctcggacaggtacacccagaccgccatcgaggaggagagccgggtctaccatgac
atcatccagcaggactatcaggacacatactacaacctcaccatcaaaaccctgatgggc
atgaactgggtggcctgccactgcccgcaggcacactacgtcatgaagacagacagtgac
atgtttgtcaacacagagtatctcatccagaagttgctgaagcccgagctcccgcccaga
cagagctacttcactggctatctaatgaggggctacgcgcccaaccgcaacaaggacagc
aagtggtacatgcctccagagctgtaccctagtgagaggtaccccatcttctgctcggga
accgggtatgtgttctctggggacatggcggagaggatctatcaggcgtctctgagcata
cggaggctgcacctggaggacgtttacgtgggcatctgcctggccaagctccgcatcgac
cccacgccgccgcccaacgagttcctcttcaaccactggagggtgtcctactccagctgt
aagtacagccacctcatcacctcccaccagttccagcccaacgaactggtcaagtactgg
aaccacctgcagaccaacaagcacaacgcgtgcatcaacatggccaaggaaaggaacggg
aggtatagacacaggaagtatcatgcagagacacctcagtga
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