Coregonus clupeaformis (lake whitefish): 121540428
Help
Entry
121540428 CDS
T08357
Name
(RefSeq) RPE-retinal G protein-coupled receptor-like
KO
K04254
retinal G protein coupled receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121540428
04030 G protein-coupled receptors [BR:
cclu04030
]
121540428
Cilium and associated proteins [BR:
cclu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121540428
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Vision
Opsin
121540428
BRITE hierarchy
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
ECF_trnsprt
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
121540428
NCBI-ProteinID:
XP_041705260
LinkDB
All DBs
Position
1:complement(23740095..23759216)
Genome browser
AA seq
295 aa
AA seq
DB search
MVSSYTLPDGFSDFDVFSLGSCLLVEGLLGFFLNAVTVAAFLKIRELRTPSNFLVLSLAL
ADMGISANATIAAFSSFLRYWPYGSDGCQTHGFQGFVTALASIHFIAAIAWDRYHQYCTR
TKLQWSSAITLAIFIWLFTAFWSAMPLIGWGEYDYEPLRTCCTLDYSKGDRNYVSYLIPM
AIFNMAIQTFVVMSSYQSIGQKFKKTGNPRFNTATPLKTFLFCWGPYGVLAFYAAVENAN
LVSPKIRMLAPILAKTSPTFNVFLYALGNEHYRGGIWQFLTGEKIEVLQIENKFK
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcttcctacactttaccggatggtttctcggacttcgacgtgttctctttggga
tcttgtctgctagtggagggtcttctgggattcttcctgaatgctgtgacagtcgctgct
tttctcaaaataagagaactgagaacccccagcaatttcctagtcttgagcttggcattg
gccgatatgggtatctctgcgaatgcaaccattgccgctttctccagttttctgaggtac
tggccctatggctctgatggctgccagactcacggcttccagggtttcgtgacagctctc
gccagcatccacttcattgctgccatcgcatgggacagataccaccagtactgcacaagg
acgaagctacagtggagcagtgctatcactctggctattttcatctggctgttcaccgcc
ttctggtctgccatgcccctcatcggctggggagagtatgactacgaacccctcaggacc
tgctgtaccctggactacagcaaaggagacaggaactatgtgtcctacctaatccccatg
gccattttcaacatggccatccagacctttgttgtcatgtcctcctaccagtccatcggc
cagaaattcaagaagaccggaaaccccaggtttaacactgccactcccctgaagacattt
ttgttctgctggggaccctatggagtcctggccttctacgctgctgttgagaatgccaac
ctggtctctcccaagataaggatgttggctcctattctggcaaagacctctcctaccttc
aatgttttcctgtacgccctgggcaatgagcactacagaggcggcatctggcagttcctc
actggggaaaagattgaagtgcttcaaattgagaacaagttcaaataa
DBGET
integrated database retrieval system
