Coregonus clupeaformis (lake whitefish): 121540443
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Entry
121540443 CDS
T08357
Name
(RefSeq) inositol polyphosphate 5-phosphatase OCRL-like isoform X3
KO
K01099
inositol polyphosphate 5-phosphatase INPP5B/F [EC:
3.1.3.36
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00562
Inositol phosphate metabolism
cclu01100
Metabolic pathways
cclu04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
121540443
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
121540443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121540443
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
121540443
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121540443
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
121540443
Rab GTPases and associated proteins
Rab associated proteins
121540443
Protein recycling
Other Rab GTPase associated proteins
121540443
Endosome - Golgi transport
Rab associated proteins
121540443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
OCRL-like_ASH
OCRL_clath_bd
RhoGAP
Exo_endo_phos
INPP5B_PH
Ig_CFAP65_4th
HYDIN_VesB_CFA65-like_Ig
DUF2608
Motif
Other DBs
NCBI-GeneID:
121540443
NCBI-ProteinID:
XP_041705252
LinkDB
All DBs
Position
3:10391594..10424283
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AA seq
937 aa
AA seq
DB search
MSCPVPQLSIPINSHFQIVREAEEALLIDLPLKTCIRVRVRGEKAQELILELQDDERSQS
FFSQVKRAKQQVESKSTQIKAMDPIMPAPRKVSAPVPPIPPQRGIHKAANSHTKPSSVPP
PPPNLNNSSSANQTGTADRRDPALSLAIDFGFEDNFNHSLKVEEKKNQQNGIGPPREAPP
VPPLPPRKGSYTPSNPLPPAPIPISKDRASSVQAKDAAFITPAKTDLSVDRPTSWSDSPT
TNSMRSAMFSTQAGQREYLIKHRLAKKEEEYVDIKDFRFFSGTWNVNGQSPDSSLEPWLC
CEPEPPDVYALGFQELDLSTEAFFYLDSSKEQLWVEAVERSLHPKAKYKRVRIIRLVGMM
LVVFVNKVHKNHIKDVAAEHVGTGIMGKMGNKGGVAVRFVFHNTSFCFVNSHLAAHVEDF
ERRNQDYKDICARMSFHLLDHPPLNIVKHDVVIWVGDLNYRLFVYDAAEVKQLISHNQLR
KLQEYDQLNIQRQNMRSFTDFMEGEINFKPTYKYDAKTDRWDSSGKCRVPAWCDRILWRG
SNVKQLYYRSHMELKTSDHKPVSSLFSVGVKVVNEARHKKVFEKIVRMMDRMENECLPSL
SLTHREFTFKDVKFRQLQRESFVISNDGQVPCHFAFIPKLNDSQYCKNWLRAEPSEGFLE
PNETLEIFLDVYVSKDSVTLLNSGEDAIEDILVLHLDRGKDYFITISGNYLPSCFGTSLE
TLCHMKKPIREIPITKLIDLGEDSYMEKEKSRVSFLMVDSAGTEDKPLKIPKEVWLLVNH
LFTQSCQQEDLFQTPGLQEELQSIIDCLDTSIPDSIPGCNHSVAEALLIFLEALPEPVVC
YELYQRSLDCSHDSRLCKQLISQLPRAHRNVFRYLMAFLKELLKYAHNNNLTASLIATLF
ASLLIRPPPNMVGRQTPQDRQRAIDFILGFLMGGDEE
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtccggtacctcagttgtcaatacccatcaacagtcattttcagattgtgcgg
gaggctgaagaagcgctgctcattgacttgccattaaaaacttgcattagggtacgggtc
agaggggagaaagcccaggagctgattctggagctccaggatgatgagcgcagccagtcc
ttcttctcccaggtgaagagagccaagcagcaagtcgagtccaaaagcacgcaaatcaaa
gcgatggatcccatcatgccggctccccgcaaggtctctgccccagtcccacccatccct
cctcagagagggatccacaaagctgccaactctcacaccaagcccagcagtgtaccacca
ccgcctcccaacctcaacaacagctcttcagccaaccagactggcacagctgacagacgg
gacccagctctctctctggccatagactttggcttcgaggacaacttcaatcactccctc
aaagtggaggagaagaagaaccagcagaatggcatcgggcccccccgggaagctcctcca
gttccccctctgcctcctcgtaaaggctcctacactccctccaatcctctcccccccgcg
cccatccccatctccaaagacagagcctcgtccgtacaggctaaagatgccgccttcatc
acgcctgccaaaacagatcttagtgttgaccggcccacctcatggagcgacagccccacc
accaacagcatgcggagcgccatgttctccactcaggccggccagagagagtacctcatc
aaacaccgcctggccaagaaggaggaggagtacgtagacatcaaggacttcagattcttt
tctggaacgtggaatgtgaatggccagtccccagacagcagtctagagccctggctgtgt
tgtgagccagaacctcctgacgtctacgctctgggtttccaggagctggacctgagcaca
gaggccttcttctatctggactcctctaaggagcagctgtgggtggaggctgtggagaga
agtctgcaccccaaagccaagtacaagagggtgcgcatcatccgactagtgggcatgatg
ctggtggtgtttgtcaacaaggtgcacaagaatcacatcaaagatgtggcggcggagcac
gtgggaactggcatcatgggaaaaatgggtaacaagggaggtgtggcggtgcgctttgtg
ttccacaacaccagcttttgctttgtcaactcccacctggcggcccacgtggaggacttt
gagaggaggaaccaggactacaaagacatctgtgcccgtatgagcttccacctgctagac
caccctcccctcaacatcgtcaaacacgatgtagtgatctgggtaggagatctgaactac
cggttgtttgtgtacgatgcagctgaggtcaaacagctcatctcccacaaccaactgagg
aaactgcaggagtatgaccagctgaatatccagagacagaacatgcgatccttcacagac
ttcatggagggagagatcaatttcaagcccacatataagtacgacgccaagacggaccgt
tgggactctagtggtaagtgtcgtgtcccggcgtggtgcgaccggatcctgtggaggggc
agtaacgtgaagcagctctactacaggagccacatggaactgaagaccagcgaccacaag
cctgtcagctccctcttcagtgtcggggtgaaggtggtgaacgaagctcgccacaagaaa
gtgtttgagaagatcgtgcgcatgatggacaggatggagaacgaatgtctcccgtctctg
tcactgacccacagagagttcacctttaaggacgtcaagttccgccaactgcagcgggag
agttttgtgatctccaacgacgggcaggtcccctgtcactttgcctttatccccaagctc
aacgactcacagtactgcaagaactggctccgcgctgagcccagcgaaggcttcctagag
cccaacgaaactttagagatcttcctggatgtgtacgtgagcaaggactcagtgacgctg
ctcaactcaggagaggacgccatcgaggacatcctggtgctgcacctggaccgaggcaag
gactacttcatcaccatctcaggcaactacctgcccagttgcttcggtacctcgctggag
acgctgtgccacatgaagaagcccatccgggagatccccatcaccaagctcattgacctg
ggagaggacagctacatggaaaaggagaagtccagggtgagcttcctgatggtggacagt
gctggcacggaggacaagcccttaaagatccccaaggaggtgtggctgctggtgaaccac
ctctttacccagtcctgccagcaggaggacctgttccagacaccgggcctgcaggaggag
ctgcagagtatcatcgactgcctggacaccagcattcctgactccatccctggttgtaac
cactcggtggctgaggccctgttgatatttctggaagctctgcctgagccagtggtgtgt
tacgagctctaccagcgcagcctggactgctcccatgacagccgcctctgcaaacagttg
atctcccagctgcccagggctcaccgcaacgtgttccgctacttgatggcgttcctcaag
gagctgctgaaatacgcccacaacaacaacctcactgccagcctcatagctaccctcttt
gccagcctgctcatccggcccccgcccaacatggtgggccgacagaccccgcaggaccga
cagagagccatcgacttcatcctgggcttcctcatgggaggggacgaggagtga
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