Coregonus clupeaformis (lake whitefish): 121540486
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Entry
121540486 CDS
T08357
Name
(RefSeq) interferon regulatory factor 4 isoform X1
KO
K09445
interferon regulatory factor 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121540486
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
121540486
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
121540486
NCBI-ProteinID:
XP_041705324
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Position
26:complement(30406920..30412319)
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AA seq
468 aa
AA seq
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MNPESDYGMSTVSCGNGKLRSWLIEQVDTGKYPGLVWENDDKCIFRIPWKHAGKQDYNRD
EDAALFKAWALFKGKFREGIDKPDPPTWKTRLRCALNKSNDFEELVQRSQLDISDPYKVY
RIIPEGAKKHFLLSGSKQEDSGSPLSPLRYPTQPSYPALQTQMSGYMPSAERGWMRDYLP
EQASLPELPYAQCPYPSRSLSWAQGPSMDNGYQITGSFYTYSPTDAQPSPFTLDTSMRSA
ETLSDMRLHVSVFYRDSLWREVTTSSPEGCRIAPCSPDNKLYSPTVGPDLVPLPLDSLPA
LGRGEECPPSPPRCTLERGVLLWMAPDGLYARRLCQERVFWEGGLSSYIDKPNKLEREHT
CKLLHTQDYLTELQGYALHCRPPPRLQVLLSFGDECLDPQRQRTLTVQVEPMFARQLLYY
TQHQQTSGHYYRSYDLPLPGVTEHSMTPAVTEDYQRVITHHHSNTLQD
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctgagtcggactacggcatgtctacggtgagctgtgggaacggaaagctccgc
tcgtggctaatcgagcaggtggataccgggaagtacccgggcctggtctgggagaacgac
gacaagtgcattttcaggataccatggaagcacgcgggcaagcaggactacaaccgcgac
gaggatgccgctctcttcaaggcttgggcgctgtttaaaggcaagtttcgggagggcatc
gacaaacccgacccgccaacgtggaagacacgcctgcggtgcgcgctcaacaaaagtaac
gacttcgaggagctcgtgcagcgaagtcagctggacatctcagacccttacaaagtctac
cggatcatcccggagggcgccaagaagcatttcttgctatcaggatccaaacaggaggat
agtggcagccccctgagtcctctgaggtaccccacgcagccctcataccccgccctgcag
acacagatgtcggggtacatgcccagtgcagagcgaggctggatgagggactatcttcca
gagcaggcctctcttcctgagctgccctatgcccagtgcccctacccctcacgcagtcta
tcctgggcccagggacccagcatggacaacgggtaccagatcacagggtccttctacacc
tacagccctactgacgcccagccctcccccttcacactggacaccagcatgagatcagca
gagacactctcagatatgcggttacatgtgtcagtgttttaccgggactctctgtggagg
gaggtgaccacctccagtccagagggctgtcgcatcgctccctgctccccagacaacaag
ctatattcccccactgtgggtccagacctggtgcctctacccctggacagcctcccagcc
ctgggaaggggggaggagtgtccccccagcccccctcgttgtaccctggagaggggtgtg
ctgctgtggatggccccagatggcctctacgcccggcggctgtgccaggagagagtgttc
tgggagggagggttatcatcctacatagacaaacccaacaagctggagagagaacacacc
tgtaaactactgcacacacaagactacctcacagagttgcagggctatgccctccactgt
cggccccctccacgtctccaggtgctgctgagcttcggagacgagtgtctggatccccag
agacagaggaccctcactgtacaggtagagcccatgtttgccaggcagctcctgtactac
acccagcaccagcagaccagcggacactactaccgcagctacgacctccctctccctggg
gtcacggaacacagcatgacccctgccgtaaccgaggactaccagagggtcatcacacat
caccatagcaacaccctgcaggactga
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