KEGG   Coregonus clupeaformis (lake whitefish): 121540493
Entry
121540493         CDS       T08357                                 
Name
(RefSeq) cadherin-2-like
  KO
K06736  cadherin 2, type 1, N-cadherin
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    121540493
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cclu03036]
    121540493
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cclu04515]
    121540493
   04090 CD molecules [BR:cclu04090]
    121540493
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    121540493
Cell adhesion molecules [BR:cclu04515]
 Cadherins
  Major cadherins
   121540493
CD molecules [BR:cclu04090]
 Proteins
  121540493
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_pro DUF2304 DUF3139
Other DBs
NCBI-GeneID: 121540493
NCBI-ProteinID: XP_045063632
LinkDB
Position
26:1062108..1144875
AA seq 926 aa
MFLTLVALVILLAAVQVAVQGGGAVGSLPRRQGTLQCTRGFSQEEYSVAVDEELREGQAL
LTVRFADCGLGDRVLLEVGDVEDFRLDEDGMVYARHAFRLADRKRAFLVVRARDLETKED
WKTHVYLLLRKDGMRETTEHKHIKQVNSSSAAVTQQVREIVFPWHSLVVGDDGSLRRVKR
DWVIPPINVPENSRGQFPEELVRIRSDRDKNSLLRYSVTGPGADQPPTGIFIINPISGQL
SVTKPLDREHISNFHLRAHAVDLNGNQIENPIDIVINVIDMNDNRPEFTHTIYNGSVPEG
SKPGSFVMTVTSLDKDDPKTANGMLRYKILSQNPESPSSNMFTINNKTGGIITVAAGLDR
EKVPQYTLIIQATDMEGNPTYGLSNTATAIIRITDVNDNPPEFTADKFYGEVQENRVNVI
VANLTVTDKDQPHTAAWSTVYRITAGDPTGRLSIPTDLTTNEGLVTVVKPIDYEVSRSFV
LTVLAENEVSLARGIHLPRQSTATVSVRITDVNESPEFSPNPKVIKLEEGLLAGSLLTTF
TAQDPDRYMQQNIRYTKMFDPANWLEIDPVNGRISTIAVLDRESPYVKNNLYNITFMASD
NGIPPASGTGTLQMYLLDINDNAPRVFPPEVEMCEKPEPNAINITASDSDLTPNAGPFAF
EMANRPADARRNWTLTRLNGEYAQIRLRIGFLESGIYEVPIIITDSGNLPMSNTSYLRVK
VCQCDPHGDCVDMERIIAAGLGTGAIIAILICIIILLVMVLFFVMWMKRRDKERQAKQLL
IDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDALETEMVKVGIRRMDERPLHQDHLY
PLRSAAPHPGDIGDFIHEGLKAADNDPTAPPYDSLLVFDYEGSGSTAGSISSLHSSSSGG
DQDYDYLSDWGPRFRKLADLYGGGDN
NT seq 2781 nt   +upstreamnt  +downstreamnt
atgtttctaaccttagtcgcgctggtaattctactggcagctgtgcaggttgctgtgcag
ggtggaggggccgtggggtcattgccacggaggcaggggacgttgcagtgcacacgaggc
ttctcccaggaggagtacagtgttgccgtggacgaggagctgagagagggacaagcactc
ctcactgtgaggtttgcagactgtggcctgggcgacagggtgctgttggaggtgggcgac
gtggaggacttcaggctggatgaggatggcatggtgtacgcccggcacgccttccgtctg
gcggacaggaagagagccttcctggtggtgcgagcgagggatctggagaccaaggaggat
tggaagacacatgtttacctcctcctccgcaaagacggaatgcgagagacgacagaacac
aaacacatcaaacaggtgaactccagctctgcagctgtgactcagcaggtgcgggagatc
gtgtttccctggcacagcttggtcgttggggacgatggatctctgaggcgggtgaagagg
gactgggtcatcccccccatcaatgtccctgagaactcacgaggacagttcccagaggag
ctagtcaggatccggtcagaccgtgataagaacagtctcttacggtacagtgtgactgga
cccggtgctgaccagcctccgaccgggatcttcatcatcaaccccatctctggtcagctc
tctgtgaccaaacccctcgaccgggaacacatctccaacttccacctgcgagcccatgct
gtggacctgaatgggaaccagatagagaaccccatagacatcgtcatcaacgtcatagac
atgaatgacaacagaccagagtttacacacaccatctacaacggatcagtaccagaggga
tccaaaccagggtcctttgtgatgacagtgacatcactggacaaggatgaccctaaaaca
gccaatgggatgctccgatacaagattctatctcagaaccccgaaagcccgtcctccaac
atgttcaccatcaacaacaagacaggaggaatcatcactgtggctgcagggctcgacaga
gagaaagttcctcagtacacgttgatcatccaggctactgacatggaggggaaccctacc
tatggtctgtctaacacagctacagctataatcaggatcactgacgtcaatgataacccc
ccagagttcaccgctgacaaattctatggagaggtgcaggagaaccgtgtgaatgtgatc
gtagctaatctgacagtaacagataaggaccagccccacactgcagcctggagtactgtg
tacaggatcacagctggagaccccactggacgcctctccatccccactgacctcaccacc
aacgagggactggtcactgtggttaagcctatagactatgaggtgagtcgttccttcgtg
ctgacggtactggctgagaacgaggtttccctggcccgtggtatccacctaccccgtcag
tccaccgccaccgtgtctgtacgcatcacagacgtcaacgagagcccagagttctcccct
aaccccaaagtcatcaaactagaggaggggctactggccggctcgctactcaccaccttt
acagcacaggaccctgacagatacatgcaacagaacatacggtacaccaagatgttcgac
cctgctaattggctggagatagaccctgtaaacgggcggatctccaccatcgctgtgctg
gacagagagtctccctatgtgaagaataacctctataacatcaccttcatggcctctgac
aatggcatccccccagccagtggtacaggtacattacagatgtacctgttggacataaac
gacaacgctcctcgtgtcttccctccagaggtggagatgtgtgagaagcctgagcccaat
gccatcaacatcaccgccagcgactccgatctgacccctaacgccggccccttcgccttc
gaaatggccaaccggccggcagacgcacgcaggaactggaccctcacacgcctcaatggt
gaatatgctcagatcaggctgcggataggttttctggagagtggtatctacgaggttcct
atcatcatcacagactcaggcaacctgcccatgtccaatacatcctacctgcgggtcaag
gtgtgtcagtgtgatccccatggagattgtgtagacatggaacgcataatcgctgcaggg
ctgggcactggagccatcatcgctatcctcatctgtatcatcatactgctagtgatggtg
ttgttctttgtgatgtggatgaagaggagggataaggaacgtcaggccaagcagctgctc
atcgacccggaggacgatgtcagagacaacatactgaagtacgacgaagaaggaggagga
gaggaggaccaggactatgacctgagccagctgcagcagcccgatgctttggagacggaa
atggtgaaggtggggatcaggcgtatggatgagagacccttacaccaggaccacctgtac
cccctccgttctgctgcaccccaccccggagatataggagacttcatccacgagggtttg
aaggcagctgataacgacccgacagcgcccccctacgacagtcttctggtgtttgactac
gagggcagtggctccaccgctggctccatcagctcccttcactcctcctcttccggcggc
gaccaggactacgactacctcagtgactggggcccgcgcttccgcaagctggcagacctc
tatggtggaggggacaactag

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