Coregonus clupeaformis (lake whitefish): 121540493
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Entry
121540493 CDS
T08357
Name
(RefSeq) cadherin-2-like
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121540493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121540493
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121540493
04090 CD molecules [BR:
cclu04090
]
121540493
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
121540493
Cell adhesion molecules [BR:
cclu04515
]
Cadherins
Major cadherins
121540493
CD molecules [BR:
cclu04090
]
Proteins
121540493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
DUF2304
DUF3139
Motif
Other DBs
NCBI-GeneID:
121540493
NCBI-ProteinID:
XP_045063632
LinkDB
All DBs
Position
26:1062108..1144875
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AA seq
926 aa
AA seq
DB search
MFLTLVALVILLAAVQVAVQGGGAVGSLPRRQGTLQCTRGFSQEEYSVAVDEELREGQAL
LTVRFADCGLGDRVLLEVGDVEDFRLDEDGMVYARHAFRLADRKRAFLVVRARDLETKED
WKTHVYLLLRKDGMRETTEHKHIKQVNSSSAAVTQQVREIVFPWHSLVVGDDGSLRRVKR
DWVIPPINVPENSRGQFPEELVRIRSDRDKNSLLRYSVTGPGADQPPTGIFIINPISGQL
SVTKPLDREHISNFHLRAHAVDLNGNQIENPIDIVINVIDMNDNRPEFTHTIYNGSVPEG
SKPGSFVMTVTSLDKDDPKTANGMLRYKILSQNPESPSSNMFTINNKTGGIITVAAGLDR
EKVPQYTLIIQATDMEGNPTYGLSNTATAIIRITDVNDNPPEFTADKFYGEVQENRVNVI
VANLTVTDKDQPHTAAWSTVYRITAGDPTGRLSIPTDLTTNEGLVTVVKPIDYEVSRSFV
LTVLAENEVSLARGIHLPRQSTATVSVRITDVNESPEFSPNPKVIKLEEGLLAGSLLTTF
TAQDPDRYMQQNIRYTKMFDPANWLEIDPVNGRISTIAVLDRESPYVKNNLYNITFMASD
NGIPPASGTGTLQMYLLDINDNAPRVFPPEVEMCEKPEPNAINITASDSDLTPNAGPFAF
EMANRPADARRNWTLTRLNGEYAQIRLRIGFLESGIYEVPIIITDSGNLPMSNTSYLRVK
VCQCDPHGDCVDMERIIAAGLGTGAIIAILICIIILLVMVLFFVMWMKRRDKERQAKQLL
IDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDALETEMVKVGIRRMDERPLHQDHLY
PLRSAAPHPGDIGDFIHEGLKAADNDPTAPPYDSLLVFDYEGSGSTAGSISSLHSSSSGG
DQDYDYLSDWGPRFRKLADLYGGGDN
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgtttctaaccttagtcgcgctggtaattctactggcagctgtgcaggttgctgtgcag
ggtggaggggccgtggggtcattgccacggaggcaggggacgttgcagtgcacacgaggc
ttctcccaggaggagtacagtgttgccgtggacgaggagctgagagagggacaagcactc
ctcactgtgaggtttgcagactgtggcctgggcgacagggtgctgttggaggtgggcgac
gtggaggacttcaggctggatgaggatggcatggtgtacgcccggcacgccttccgtctg
gcggacaggaagagagccttcctggtggtgcgagcgagggatctggagaccaaggaggat
tggaagacacatgtttacctcctcctccgcaaagacggaatgcgagagacgacagaacac
aaacacatcaaacaggtgaactccagctctgcagctgtgactcagcaggtgcgggagatc
gtgtttccctggcacagcttggtcgttggggacgatggatctctgaggcgggtgaagagg
gactgggtcatcccccccatcaatgtccctgagaactcacgaggacagttcccagaggag
ctagtcaggatccggtcagaccgtgataagaacagtctcttacggtacagtgtgactgga
cccggtgctgaccagcctccgaccgggatcttcatcatcaaccccatctctggtcagctc
tctgtgaccaaacccctcgaccgggaacacatctccaacttccacctgcgagcccatgct
gtggacctgaatgggaaccagatagagaaccccatagacatcgtcatcaacgtcatagac
atgaatgacaacagaccagagtttacacacaccatctacaacggatcagtaccagaggga
tccaaaccagggtcctttgtgatgacagtgacatcactggacaaggatgaccctaaaaca
gccaatgggatgctccgatacaagattctatctcagaaccccgaaagcccgtcctccaac
atgttcaccatcaacaacaagacaggaggaatcatcactgtggctgcagggctcgacaga
gagaaagttcctcagtacacgttgatcatccaggctactgacatggaggggaaccctacc
tatggtctgtctaacacagctacagctataatcaggatcactgacgtcaatgataacccc
ccagagttcaccgctgacaaattctatggagaggtgcaggagaaccgtgtgaatgtgatc
gtagctaatctgacagtaacagataaggaccagccccacactgcagcctggagtactgtg
tacaggatcacagctggagaccccactggacgcctctccatccccactgacctcaccacc
aacgagggactggtcactgtggttaagcctatagactatgaggtgagtcgttccttcgtg
ctgacggtactggctgagaacgaggtttccctggcccgtggtatccacctaccccgtcag
tccaccgccaccgtgtctgtacgcatcacagacgtcaacgagagcccagagttctcccct
aaccccaaagtcatcaaactagaggaggggctactggccggctcgctactcaccaccttt
acagcacaggaccctgacagatacatgcaacagaacatacggtacaccaagatgttcgac
cctgctaattggctggagatagaccctgtaaacgggcggatctccaccatcgctgtgctg
gacagagagtctccctatgtgaagaataacctctataacatcaccttcatggcctctgac
aatggcatccccccagccagtggtacaggtacattacagatgtacctgttggacataaac
gacaacgctcctcgtgtcttccctccagaggtggagatgtgtgagaagcctgagcccaat
gccatcaacatcaccgccagcgactccgatctgacccctaacgccggccccttcgccttc
gaaatggccaaccggccggcagacgcacgcaggaactggaccctcacacgcctcaatggt
gaatatgctcagatcaggctgcggataggttttctggagagtggtatctacgaggttcct
atcatcatcacagactcaggcaacctgcccatgtccaatacatcctacctgcgggtcaag
gtgtgtcagtgtgatccccatggagattgtgtagacatggaacgcataatcgctgcaggg
ctgggcactggagccatcatcgctatcctcatctgtatcatcatactgctagtgatggtg
ttgttctttgtgatgtggatgaagaggagggataaggaacgtcaggccaagcagctgctc
atcgacccggaggacgatgtcagagacaacatactgaagtacgacgaagaaggaggagga
gaggaggaccaggactatgacctgagccagctgcagcagcccgatgctttggagacggaa
atggtgaaggtggggatcaggcgtatggatgagagacccttacaccaggaccacctgtac
cccctccgttctgctgcaccccaccccggagatataggagacttcatccacgagggtttg
aaggcagctgataacgacccgacagcgcccccctacgacagtcttctggtgtttgactac
gagggcagtggctccaccgctggctccatcagctcccttcactcctcctcttccggcggc
gaccaggactacgactacctcagtgactggggcccgcgcttccgcaagctggcagacctc
tatggtggaggggacaactag
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