Coregonus clupeaformis (lake whitefish): 121540498
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Entry
121540498 CDS
T08357
Name
(RefSeq) CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase isoform X1
KO
K00781
N-acetyllactosaminide alpha-2,3-sialyltransferase (sialyltransferase 6) [EC:
2.4.3.6
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00513
Various types of N-glycan biosynthesis
cclu00514
Other types of O-glycan biosynthesis
cclu00515
Mannose type O-glycan biosynthesis
cclu00533
Glycosaminoglycan biosynthesis - keratan sulfate
cclu00601
Glycosphingolipid biosynthesis - lacto and neolacto series
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
121540498
00515 Mannose type O-glycan biosynthesis
121540498
00514 Other types of O-glycan biosynthesis
121540498
00533 Glycosaminoglycan biosynthesis - keratan sulfate
121540498
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
121540498
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121540498
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.3 Sialyltransferases
2.4.3.6 N-acetyllactosaminide alpha-2,3-sialyltransferase
121540498
Glycosyltransferases [BR:
cclu01003
]
Terminal extension
Sialyltransferase
121540498
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Motif
Pfam:
Glyco_transf_29
YhiY
2-Hacid_dh_C
Motif
Other DBs
NCBI-GeneID:
121540498
NCBI-ProteinID:
XP_041705346
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Position
26:complement(1486616..1594784)
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AA seq
397 aa
AA seq
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MFILASSHFGDIKETEVMRIMKPTRHLLLVLCPMVVLGFLYYSSGRLHPWGWGRKSQTDL
DSFFSVGRLFHSVYDKQGFLLKLDGNLPLELMYKYGNLSEGVCKPGYAAAKMTAIYPKFT
KPAPMFLDLNFRRFTKISKFFPPFGMKKQENIIDNILTATKRYGLGDELDSLSCKKCIIM
GNGAILANKSMGARVDEYNVIARLNEAPVSGYEKDVGSRTTMRITYPEGAIQKTERYEQD
SLFVLSAFKALDFKWLRSIIFKERLHSTNGFWKSVARHIPREPSEMRILNPYFIQEAAFR
FIGLPHNNGKMGRGNIPTLGTVAITMALHNCDEVDVAGFGYDMSTPHAPLHYYEKIKMAA
IKQSWTHNISEEKEFLIKLVKAGVIQDLTHGICGSGC
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtttattttagctagcagtcacttcggcgacatcaaagaaacggaggtgatgagaatc
atgaagccaacccgtcacctgctcctggtgctttgtcccatggtggtcctgggcttcctc
tactactcctctgggagactgcatccctggggctggggacgtaaatcacagacagacctg
gatagttttttctccgtgggacgattatttcactcagtgtatgacaaacagggattcttg
ctgaagttggatggtaatctgcctttggagctgatgtacaagtatggcaatctcagcgag
ggcgtctgcaagcctggctacgcagctgccaagatgactgccatttatccaaagttcact
aaaccagcccccatgttccttgatctgaattttagacgattcaccaagatcagcaaattc
ttcccaccttttggaatgaaaaagcaagaaaatatcatagataatattctgactgccaca
aagcgctatggtctgggagatgagctggacagtctgagttgtaagaagtgcatcatcatg
ggaaatggtgctattctggccaacaagtctatgggtgcaagggttgacgagtacaatgtg
attgcaaggttgaacgaggccccagtgagtggctatgagaaggatgtgggttcccggacc
actatgcgtatcacctacccagagggagccatccagaagactgaacgctacgaacaggac
tccctcttcgtcctctctgccttcaaagctctcgacttcaaatggctgcggtccatcatc
tttaaagagaggctgcatagtacaaatgggttctggaagtctgtggcccgtcatatcccc
agggagcccagtgagatgaggatccttaacccttacttcatccaggaggctgccttcagg
ttcattggcctgccacacaacaacggaaagatggggagagggaatattccgacactgggg
actgttgccataacaatggccctccataactgtgatgaggtagacgtggctggatttggt
tatgacatgagtaccccccacgcccccctacactactatgagaagatcaagatggcggcc
atcaaacagtcctggactcataacatttctgaagagaaggagttcctgattaagctggtg
aaggcgggggttatacaggacttgacccatgggatctgtggctcagggtgctga
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