Coregonus clupeaformis (lake whitefish): 121540524
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Entry
121540524 CDS
T08357
Name
(RefSeq) volume-regulated anion channel subunit LRRC8C
KO
K22038
volume-regulated anion channel
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121540524
Ion channels [BR:
cclu04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
121540524
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GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_R13L1-DRL21
LRR_5
LRR_LRWD1
LRR_9
TEX29
Motif
Other DBs
NCBI-GeneID:
121540524
NCBI-ProteinID:
XP_041705392
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Position
26:complement(4340739..4387522)
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AA seq
794 aa
AA seq
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MIPVTEFRQFSEQQAQFRVLKPWWDVFTDYLSVVMLMIGVFGCTLQVMQDKIICLPQRMS
MPNQTILLPNKTELVSPVVSQDVHEMMGLKTNLDLQQYSFINQMCYEKALHWYAKYFPYL
VLIHTLIFMVCSNFWFKFPGSSSKIEHFISILGKCFDSPWTTRALSEVSGENPEEKDKKS
SASRAILNLSVEGKLDNLEKTQSLKSIPEKIVVDKPTASALEKKEGEQAKALFEKVKKFR
LHVEEGDILYIMYVRQTVLKVMKFLLIIAYNSALVSEVQITVKCSVDIQDMTGYKHFSCN
HTMAHLFSKLSYCYLCFVAVYGFTCLYTSYWLFYRSLKEYSFEYVRQETGIDDIPDVKND
FAFMLHMIDQYDPLYSKRFAVFLSEVSENKLKQLNLNHEWTPEKLRQRLLTNHNNRLELQ
LFMLSGLPDTIFEVTELQSLKLEIINNVTIPASIAQLEDLQELSLYQCYLKIHATATSFL
KENLKVLRVKFDDSRELPHWLYHLRNLEELYLIGSLSPDASKNVVLESLRELKNLKTLSL
KSNFTKIPQSVVDVSSHLQRLYVYNDGTKLVMLNNLKKMVNLTELELVHCDLERIPHAVF
SLTNLQELDLKENNLHSIEEIVSCQHLRKLTCLKLWHNSICYIPEHIKKLGSLERLYFSH
NKIEILPSHLFLCNKLRYLDLSNNDIRFIPPEIGVLQSLQYFSVTCNKIENLPDELFFCK
KLTTLKLGKNTLSLLSPKISYLVLLTHLELKGNHFELLPPELGFCRALKRSGLIVEDALF
ETLPSEIRDKMKAE
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtgacagagttccgacagttctcggaacagcaggcacagttccgggtcctg
aagccctggtgggatgtgttcacagactacctctctgtggtcatgctaatgatcggagtg
ttcggatgcaccctacaggtgatgcaggacaaaatcatctgccttccccagagaatgtcc
atgccgaaccaaacaatactcttaccaaataaaaccgagctggtctcacccgttgtgtca
caggatgtgcatgagatgatgggcctgaaaaccaacctggacctccagcagtacagcttc
atcaaccagatgtgctacgagaaggctctgcactggtacgccaagtacttcccttacctg
gtccttattcacaccctgatcttcatggtgtgtagcaacttctggttcaagttcccaggc
tctagctctaagatagagcatttcatctccatcttgggaaagtgctttgactccccctgg
actaccagagctctgtctgaggtgtctggagagaacccagaggagaaggacaagaagagc
agtgccagcagagcgatcctcaacttgtctgtagaggggaagctggacaacctggagaag
acccagtccctcaaatccatcccagagaagatcgtagtggacaagcccacagccagcgcc
ctggaaaagaaggaaggagagcaagccaaagctctgtttgagaaggtgaagaagtttcgc
ctgcacgtcgaggagggggacatcctctatattatgtatgttcgccagactgttctcaaa
gttatgaagttcctcctcatcatcgcgtataacagtgcgttagtctctgaggtacagatc
acagtgaagtgcagtgtggacatacaggacatgacgggatataagcatttctcctgtaat
cacaccatggcccacctgttctccaagctgtcatactgttacctatgcttcgtggctgtg
tatggattcacctgcctctacacttcctactggctcttctaccgctcgctgaaggagtac
tcatttgaatacgtacggcaggaaacgggaatcgatgacatcccggacgtgaagaatgac
tttgccttcatgctgcatatgatcgaccagtatgacccactgtactccaagagattcgca
gtgttcctgtcggaggtcagtgaaaacaaactaaaacagctgaacctgaaccatgagtgg
acgccagagaagctgcgtcagagactgctgaccaaccacaacaacagactggagctgcag
ctcttcatgctgtctgggcttccggacaccatcttcgaggtgacagagctccagtcccta
aagctagagatcatcaacaacgtaaccatcccagcctccatcgcccagcttgaagacctt
caggagctttctctgtatcagtgttatttaaagatccacgccacagccacctccttcctc
aaggagaacctcaaggtgctcagggtgaagttcgacgatagcagggagctgcctcattgg
ctgtaccatctgcggaatctagaggagctctacctcattggctcactgagtcctgacgct
tctaaaaatgtggttctggagtccctgagggagctgaagaatctgaagaccctatcgctc
aaaagtaactttacaaagattccccagtccgtcgtggacgtgtccagccacctgcagagg
ctgtacgtctacaacgacggcactaagctggtgatgctcaacaatttgaagaagatggtg
aacctgactgaactggagctggtgcactgtgacctggaacgcatcccacatgctgtcttc
agcctcacgaacctacaggagttggacctgaaagaaaacaacctgcactccatcgaggag
atagtcagctgccagcacctccgcaaactgacgtgcctgaaactctggcacaacagtatc
tgctacatcccagaacacatcaagaagctgggcagcctagagcgcctctactttagccac
aacaagattgagatcttgccctcgcacctgttcttatgcaacaagcttcgttacctggac
ctgtccaacaacgacatccggttcattccgccggagatcggcgtcctacagagtcttcag
tacttctctgtcacatgcaacaagatcgagaacctcccagacgagctgttcttttgcaag
aagctcacaaccctcaagctgggcaagaatacgctgtcgttgctctcaccaaagatctca
tacctggttctattgacacacctagaactgaagggcaaccattttgagctcctgcctcca
gagcttgggttctgccgggcattgaagcgcagcggcctaattgtggaggatgccctgttt
gaaaccttgccttcggaaatcagagacaaaatgaaggctgagtga
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