Coregonus clupeaformis (lake whitefish): 121540545
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Entry
121540545 CDS
T08357
Name
(RefSeq) prominin-1-A isoform X1
KO
K06532
prominin 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121540545
04090 CD molecules [BR:
cclu04090
]
121540545
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121540545
CD molecules [BR:
cclu04090
]
Proteins
121540545
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Prominin
COG5_N
Tweety
PIN_8
Motif
Other DBs
NCBI-GeneID:
121540545
NCBI-ProteinID:
XP_041705432
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Position
3:complement(11613783..11726174)
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AA seq
885 aa
AA seq
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MWKTGLLLLFWGLLTSSELQQEATEPEPRNQTPSEKLDFGYVPQGVYKTVAYYEPGVIGI
LFHMVHAFLYVVQPNPFPEDLVVKVAKDRFGAIQSEYQKPENIVLTLQAIYYETGFMVCA
MLGLLFMVLLPLVGLFFCLCRCCENCGGEMHQRQRKNADCQRGLLTTLLFATSLIITAGV
LCAYAANQNLSSQLKGMKRLVSSNLKDLQTFANETPTQIEYLIAQYATAKYSVISDLDNV
GPLLGGKIHEELGKEVRPALDGVLRMAGVKVQRAIKAMRETKEALENVRVSLEVLQEATG
KLHFNLSLVRSSLNRTLNDPGCSNEDSDATTAQLCRSIHSSLAQLYVSANFTRLPDVNNH
LESVNQVLKTDLNEIIQKGFSSFNDTPGMVSDQMRSVVDGARGMLDVISANISSSSKVFP
VNSTLANFTNFISHTQSKIEDSYPEIDQIDFYRWICCIGLCCMVVLIVAFNFLAIMCGTM
GYDKHASPTTRGCVSNTGGTLLMAGVGFSFLFSWILMGVVTATFLVGGNVEKLVCEPFHT
KQLFKVLDTPHLVNPEWRNFIPGYMYNDSDLDLTVESLYSNCKNNRSLYSAMRLDKVFNV
TTLLNSSLYTKELGKMFDSVKIDLRGIVLLESEGKQSLIDFSETGVAEINYAAYLEEVNK
GVTQVDLLSYANELEAQTDLMPKGPLQTNLKGHANSLRQIHSQLVIPMEQAMKYVRARST
LNQSIRLLERTASDLPNKITDVLKTIEAAQYLISQNATHVVNQETEKYKQTIVGYFRQYK
EWVRTSLTMEVATCKPFSNIVDTVEIVACSFLVDSLNTFWFGLGCCALFLLPSIILSVKL
AKFYRRMDTEDVYDDIETIPMKTIPAYDTMTRFPRASAPPRHIDW
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaaccgggctccttctcctcttttggggactattaacgtccagtgaactccag
caagaagcaacggagccggagccccgaaatcagacaccgtctgaaaagttggattttggc
tatgtgccccagggagtttacaaaaccgtcgcctattacgaacctggagtaatagggata
ctgttccacatggtgcacgcttttctatacgtcgtgcagcccaacccgttccccgaagat
ctcgtcgtcaaagtcgccaaggatagatttggagccattcagtcggagtatcagaagcca
gagaacattgtgctgacactccaggccatctactatgagacaggcttcatggtgtgtgcc
atgctcggcctgctcttcatggtcctactgcccctggtcggcctcttcttctgtctgtgc
cgctgctgcgaaaactgcggcggcgagatgcaccagcgccagcggaagaatgctgactgc
caacggggcctgctcaccacactgctcttcgccacttcactcatcatcacggctggagta
ctgtgtgcgtatgcagctaaccagaacctgagctcccagctcaaaggcatgaagagactg
gttagcagcaaccttaaggacctgcagacctttgccaatgagacgccaacgcaaattgaa
tacctaatagcacaatacgccactgccaagtactcagtcatttctgacctagataatgtg
ggtcctctgcttggagggaagattcatgaggaattgggcaaagaggtgcgtcctgcactg
gacggggtgctccgtatggctggagtcaaagttcagagggccattaaagccatgcgggag
accaaggaggccctggagaacgtgagggtgtctctggaggttctccaggaggcgacaggg
aagctccacttcaacctgagcctggtgcgctccagcctgaacagaaccctcaacgatccg
ggctgcagcaacgaggactcggatgccaccaccgcccagctctgccgctccatccacagc
tccctggcacagctctacgtcagcgccaacttcacccggttacctgatgtgaacaatcac
ctggaaagtgtgaatcaggtgctgaaaacggacctcaacgaaatcattcaaaagggcttc
tcctcattcaatgacactccaggcatggtgagtgaccagatgaggagcgtagtcgacgga
gcccggggcatgttggacgtcatcagcgccaacatcagcagttcctccaaggtgttccct
gtaaacagcactctggccaacttcaccaacttcatcagtcacacacagtccaagatagaa
gactcctaccctgagatcgatcagatagacttctataggtggatttgctgtattgggctg
tgctgcatggtggttctcatcgtggccttcaacttcctggccataatgtgtggcaccatg
ggatatgacaagcacgcctcccccaccacacggggctgcgtctccaacaccggcggtacc
cttctcatggccggtgtgggtttcagcttcctcttctcctggatactgatgggagtggtg
accgccaccttcctggtcgggggcaacgtggagaagctggtctgtgagcccttccacacc
aagcagctcttcaaggttttggacactcctcacctggtgaaccctgagtggaggaacttc
atcccggggtatatgtacaacgactcagacctggatctgacagtggagagtctctacagt
aattgcaaaaataacagaagtctctactctgccatgcgcctggataaagtcttcaatgtc
acaaccttgctaaactccagcctgtacaccaaggagttggggaagatgtttgacagtgtg
aagattgacctgagaggtattgtcctgctggagtctgaggggaaacagagcctcattgac
ttctctgagacgggcgtcgccgagatcaactatgcagcgtatctggaggaggtcaacaaa
ggcgtgactcaggtggacttactgtcgtacgccaatgagctggaggcacagacagaccta
atgcccaaagggcccctccagaccaatctaaagggccacgccaacagtctccggcagatc
cacagtcagctggtcatccctatggagcaggccatgaaatatgttagagcgaggagtacg
ctgaatcagagcatcagactactcgaaaggactgcctcagacctgccgaacaaaatcact
gatgtgctgaagaccatcgaagcggcccagtatctcatctcccagaatgccacacatgtc
gtcaaccaggaaacagaaaagtacaagcaaaccattgttggttacttcaggcaatacaaa
gagtgggtcaggacctccctgaccatggaggtagcaacctgcaaacccttcagcaacatc
gtggacacagtggagatcgtagcctgcagcttcttggtcgactcgttgaacacattctgg
tttggcctaggctgctgtgccctattcctccttcctagcatcatcctgtcagtaaaactg
gcaaagttctaccgtagaatggacacagaggatgtttacgatgacattgagacaattccc
atgaaaaccatccctgcctatgacactatgactaggttcccacgggcatcagctccccct
aggcatatcgactggtga
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