Coregonus clupeaformis (lake whitefish): 121540547
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Entry
121540547 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: neural Wiskott-Aldrich syndrome protein-like
KO
K23612
neural Wiskott-Aldrich syndrome protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
cclu04517
IgSF CAM signaling
cclu04520
Adherens junction
cclu04810
Regulation of actin cytoskeleton
cclu05100
Bacterial invasion of epithelial cells
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121540547
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121540547
09144 Cellular community - eukaryotes
04520 Adherens junction
121540547
09142 Cell motility
04810 Regulation of actin cytoskeleton
121540547
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121540547
05100 Bacterial invasion of epithelial cells
121540547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121540547
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121540547
Membrane trafficking [BR:
cclu04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
121540547
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
WASP / WAVE
121540547
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WH1
PBD
WH2
KOKOPELLI
DCP1
Motif
Other DBs
NCBI-GeneID:
121540547
NCBI-ProteinID:
XP_041705433
LinkDB
All DBs
Position
26:38682959..38703187
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AA seq
534 aa
AA seq
DB search
MNSHPPQRRVGNIGSILLTPQENECLFNYLGRKCITLCTAVVQVYGADRSSSWVKRCCGV
ACLIKDNPLRSYFIRVFDIKEGKTMFEQELYNNFSINSSRSYFISFAGDNCQVGLNFASE
EEAKRFRAALKDLLGRRQRKTEKRRDPANGPALPMATVDIKNPEINNVRFHNSHHHHHHH
QQQPQPHHVNNMLHSSFSKKEKKVKGKRKKLTKADIGTPSNFQHIGHVGWDPNTGFDLNN
LDPELKNLFDMCGISEAQLKDKETSKVIYDFIEKKGGVEAVKNELRRQAPPPPPXSGGPP
PPPPPHSSGPGPPPPPPPPSRGGRGAPPPPPPSRAPTSAPPPPPPSRPGALGAPPPPPPP
NRGGHGHQPPPHATLASQAPPPPPPPAAPPTGGGGAPPPPPPPPPPPPPGPPPPPELDGG
VEALHSPLGSGGKSALLEQIRGGTQLKKVEPPASKPPATTVGRDALLDQIRQGIQLKTVP
DSPDSGSPTPAPSAGIVGALMEVMQKRSKAIHSSDEDEDDDDEEDFEDDDEWDD
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgaatagccatcctccgcaacggcgggttggaaatattggttccatactcctcaccccg
caagagaacgaatgcctcttcaactacctgggcaggaaatgcattaccctgtgcacagcg
gtggtccaggtgtatggggcagacaggagctcgtcctgggtgaagaggtgctgcggagtg
gcctgtctgatcaaggataaccctctgaggtcctacttcatcagggtctttgacatcaag
gaagggaaaaccatgtttgaacaggagctctacaataacttctcaatcaacagctcgagg
tcgtatttcatttcgttcgcaggagataactgccaggtaggcctgaacttcgctagcgag
gaagaggccaagcgatttagagctgcactgaaagacctactcggcagacggcaacgtaaa
acggagaaaagacgcgaccctgcaaatggcccagctctccctatggccacggttgacatc
aagaacccggagatcaacaatgtgcgcttccacaactcccaccaccaccaccatcatcac
cagcagcagccccagccacaccacgtcaacaacatgctgcacagcagcttcagcaagaag
gagaagaaagtgaagggcaagaggaagaagctcaccaaggcagacataggcacccccagc
aacttccagcacatcggccatgtgggctgggacccaaacacaggcttcgatttgaataac
ctggacccggagctaaagaacctgtttgacatgtgtggcatctcagaggcccagctgaag
gacaaggagacctccaaggttatctacgacttcatcgaaaagaaaggaggggtggaggcc
gtcaagaacgagctccgtaggcaagccccaccacctcctcccntctcgggcggcccacct
ccccctcccccaccccacagctcgggcccaggtcccccaccaccaccaccaccaccatcg
cgaggtggccggggtgccccgccaccacctccaccctctcgggcccccacctctgcccct
cccccccctcccccctccaggcctggtgccctaggagccccccctcctcccccacccccc
aacagagggggccacggccaccagccaccccctcacgccaccctagcctcccaggcccca
ccgccacctcccccaccagcagcaccacccaccggtggcgggggagcccctcctccacct
cctcctccaccacccccacccccacctggacccccaccccctccagagctggacggtggt
gtggaggcgctccactcacccctgggctctgggggtaagtcggccctgctggagcagatc
cgtgggggcacccaactgaagaaggtagagccaccggcctccaagccaccggccaccacc
gtggggcgcgatgcgctgctcgaccagatacggcagggcatccagctaaaaaccgtacca
gacagcccagactcgggctcccctacaccggccccctcggcaggcatcgtgggggcactt
atggaagtcatgcagaagaggagcaaagccatccactcatcggatgaagatgaggatgat
gatgacgaagaagatttcgaagatgatgatgaatgggatgactag
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