Coregonus clupeaformis (lake whitefish): 121540552
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Entry
121540552 CDS
T08357
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta-like isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121540552
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cclu00535
]
121540552
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121540552
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
121540552
Proteoglycans [BR:
cclu00535
]
Cell surface proteoglycans
Others
121540552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
PTP-SAK
Tc-R-P
PTPlike_phytase
DSPc
PTP-NADK
GUN4_N
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
121540552
NCBI-ProteinID:
XP_041705449
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All DBs
Position
26:complement(39078711..39200471)
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AA seq
1336 aa
AA seq
DB search
METAVSRGFLLLTQLLLVCQLAEPVQGYGYRAQAAQRKFSEDIDWSYAGTLNQNNWANKY
PSCSNTRQSPINIEEELTQVKVQFQKLKFEGWEEVTSDRTTIKNDGKTVAVNPEGDFYVS
GGGLRGRFKVGRITFHWGRCNASSEGSEHSLSGVKYPLEMQIYCYEALHFESIDQAIKDG
GRITALSVLLETSIEDNDNYMAIIDGVNSVSRFGKSGMVVPFSLRGLLPNSTEKYFTYNG
SLTTPPCTDTVEWIVFKNTVAISDMQLEMFCEVMTMQQAGYVMLMDYLQNNFREQQHQFM
GQVFSSYTGTEEVLTPTCSSEPENVQADPHNLTSLLVMWERPRAVYDAGIEKYSVTYRLA
QGEDSAAFEYLTDGDQDVGAMLQDLIANTSYVVQVVAVCTNGLYGRVSEQLIVEMPIDDP
EATTYPNSNEFEEEEDYGPWAEPGEEQDNDMDWTTQSPTRTRPTTTTGPPSLPLPGIRTT
TPFVQRRTTTPGTPSRTTQPNRAQTSTEPSERYYTTTRAPEGAVSAGSRGRGRTQKYTTT
ATTLPSRTDDITTSSTRTEKGRGVARPVTVPSGKGSGVSMATPLPESRNVATSAPFLSQG
EPPRPTSPNMPLFSSTASSFGGVLSQTTQPVFNEASNSSHESRVGLARERERRAVVPLAV
VSTLTILGLIVLLGILVYWRKCFQIAHFYIEDNTSPRVISVSPIPMHTATDEHEALPVKQ
FVEHVTELHDTNAFSREFEILKECYEEVQACTVDLGITTDGSNHPDNKNKNRYINILAYD
HSRVRLSTQADKDGKSGDYINANYIDGFNTSKAYIAAQGPLKSSTEAFWRMVWEQNVGVI
IMITNLVEKGRRKCDQYWPLESQEEYGGFLVTVKSSKVLAHYTQRTFTIRNTKVKKVSLK
GRINERTVTQYHYTQWPDMGVPEYTLPVLTFVQKSSKARTDDMGPIVVHCSAGVGRTGTY
IVLDSMLKQIKEEGTVNIMGFLKHIRTQRNYLVQTEEQYVFIHDALVEAILGKETEVPSS
RIHSYVNDLLTPGPSGRTRLEKQFKLISSSNAKQCDYSAALKECNREKNRNSSLIPVERS
RVCLSTVAGETTSDYINASYLTGYRQSTEFIVTQNPLAGTVTDFWRMIWDHNAQVIVTLP
ETPSLAEGEEPYVYWPHKEQPISCEAFTVTLRSENHVCLANEEMLVVQHYVLEATQDDYV
LEVRHYRAPRWPNPDSPISSTFELLSLVKEESSSKEGPTVVHDQVGGVTAGTFCALSTLV
RQLEAESSVDVYQVAKMFNLMRPRTFTDVEQYQFLYKAMLSLVGTQEDERMLQSSDNNGT
VPGGTASTAESLESLV
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggctgtttcaagaggcttcctattgctcactcagctcttgctcgtctgtcaa
ttagctgaaccggtgcaaggatacggataccgggcccaggccgcccagcgcaaattctct
gaagacatcgactggtcctatgcggggactctaaaccaaaacaactgggccaacaagtat
ccatcatgcagcaataccagacagtcacccatcaacatcgaggaggagctgacgcaggtc
aaagttcagttccaaaagctgaagttcgagggctgggaggaggtgacgtctgataggacc
accatcaagaacgacggcaagaccgtggcagtgaacccagagggggacttctatgtgagt
ggaggggggctgaggggcaggtttaaggtggggagaatcaccttccactgggggcgctgc
aatgcttcctcagagggctccgagcacagcctcagcggggtcaagtatcccctggagatg
cagatctactgttatgaagcgcttcactttgagtccatagaccaggccatcaaggacggg
ggcaggatcacagctctctctgtactgttagagacaagcatcgaagacaatgacaactac
atggccattatcgacggagtcaacagtgtcagccgattcggtaagagtgggatggtggtt
cccttctctctccggggcctcctgcccaactccacagagaagtacttcacctacaatggc
tccctcaccaccccaccctgcactgacaccgtggagtggatcgtcttcaagaacactgtg
gccatctctgacatgcagctggagatgttctgtgaggtgatgaccatgcagcaggcaggc
tatgtgatgttgatggactacctgcagaacaacttcagggagcagcagcatcagttcatg
ggacaggtcttctcctcctataccggcacagaggaggtcctcactcccacctgcagttca
gagccggagaacgtgcaggcggacccccataacctgaccagcctgctggtgatgtgggag
cggccgagggcggtgtacgacgccgggatagagaagtactcagtcacctacaggctggct
cagggagaggactctgcggccttcgagtacttgactgacggagaccaggatgtgggggcc
atgctgcaggacctgatagcaaacactagctatgtggtgcaggtggtggccgtgtgcacc
aacggtctgtacggccgcgtgagcgagcagctgatcgtcgaaatgcccatcgacgacccc
gaggccaccacttatccaaattctaatgaatttgaagaggaagaggactatggaccgtgg
gctgaaccgggtgaagaacaggacaatgacatggactggacaacccaaagccctacgaga
accaggcccacaacaaccactggcccacccagcctccccttgcctggtatcagaaccacc
accccttttgtccagaggagaaccaccacaccaggcactccatccaggaccactcaaccc
aaccgagcgcagacgtccacggagccgagtgagaggtactacaccacaaccagagcacca
gagggggccgtctcggcaggcagcagaggcagggggagaacccagaagtataccactaca
gcgaccactctgccatcacgcactgatgacatcaccacttcgtcaaccaggacggagaag
ggcagaggggtggcgcgtcctgtgaccgtcccaagcggcaaaggcagcggtgtttccatg
gctacccctctcccggaaagccggaacgtggccacttccgcccccttcctctctcaggga
gaaccaccacggcctacaagtcccaacatgcccttgttttcatccactgcctcctccttc
ggcggggtactctcgcagaccacacagccggtgttcaacgaggccagtaacagcagccat
gagtccagggtgggtctggccagggagagagagaggagggccgtggtccctctggcagtg
gtctccaccctcaccatcctgggactcatcgtcctgctgggaatcctcgtctactggagg
aagtgtttccagattgcccatttctacatagaggacaacacatcacccagagtcatatct
gtttcacccatacccatgcatacagctacagatgaacatgaagcccttccggtgaagcag
tttgtcgagcacgtgacagagctccacgacaccaacgcattctccagagagtttgagata
ttgaaagagtgttacgaggaggtgcaggcgtgcacggtggacctgggtatcaccacagac
ggctccaaccatccagacaacaagaacaagaaccgatacatcaatatcctggcctatgac
cacagccgagtaaggctctcaacccaagctgacaaagatgggaagagtggagattacatt
aacgcaaactacattgacggtttcaacacgtccaaggcctacattgcagcccagggccct
ctcaagtccagcactgaggccttctggaggatggtgtgggaacagaacgtgggcgtcatc
atcatgattaccaacctggtggagaagggacggaggaagtgcgaccagtactggcccctg
gagagccaggaagagtacggtggtttcctggtgacggtgaagagcagtaaggttctggcc
cactacacccagagaaccttcaccatcaggaacaccaaggtcaaaaaggtttctctgaag
gggcggattaacgagcggaccgtgacccagtaccactacactcagtggccagacatgggc
gtgccggagtacactctgcccgtgctcacctttgtccagaagtcctccaaagccaggaca
gatgacatggggcctatcgtagtgcactgcagtgctggcgttggcaggactggtacctac
atagtgttggatagcatgctgaagcagatcaaagaagagggcacggtcaacatcatgggc
ttcctcaaacacatccgcacacagaggaactacctggtacagacagaggagcagtatgtg
ttcatccacgacgccctagtcgaggctatcttgggcaaggaaacggaggttccctccagc
cgcattcacagctacgtcaatgacctcctgaccccagggccctccggcaggacgcggcta
gagaaacagtttaagctgatatcctcgtccaatgccaaacagtgcgactactcggcagcc
ctgaaagagtgtaacagagagaagaacagaaactcctctttaatacccgttgaaaggtcg
cgggtgtgtctgtccacggtggcgggagaaactacatcagactacatcaacgcctcatac
ctcacggggtaccggcaaagcactgagttcatcgtgacccagaacccgctggccggcaca
gtgacagacttctggaggatgatctgggatcacaatgctcaggtcatcgtcacactgccg
gaaacaccaagcttggcagagggggaggagccgtacgtgtactggccccacaaggagcag
ccaatcagctgtgaggcgttcacagtgaccctgcggagcgagaaccacgtgtgtctggcc
aacgaggagatgctggtggtgcagcactacgtactggaggctacacaggatgactatgtt
ctggaggtgaggcactaccgggcgccgcgctggcccaacccagacagccccatcagcagc
acctttgagctgctcagcctggtgaaggaggagagctcctccaaggagggccccacggtg
gtccacgaccaggttggcggtgttactgcgggaaccttctgtgccctgtctactctggtg
cgccaactagaggcagagagctctgtggacgtgtaccaggtggccaagatgttcaacctc
atgaggcccagaaccttcactgatgttgagcagtatcagttcctgtacaaagccatgctg
agtctggtgggcacacaggaggacgagaggatgctccagtcctcagacaacaacggaacg
gtcccaggtggcaccgccagcacggcagagagccttgagtccctggtgtaa
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