Coregonus clupeaformis (lake whitefish): 121540557
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Entry
121540557 CDS
T08357
Symbol
ticam1
Name
(RefSeq) TIR domain-containing adapter molecule 1
KO
K05842
toll-like receptor adapter molecule 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04217
Necroptosis
cclu04620
Toll-like receptor signaling pathway
cclu04621
NOD-like receptor signaling pathway
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
121540557 (ticam1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121540557 (ticam1)
04621 NOD-like receptor signaling pathway
121540557 (ticam1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121540557 (ticam1)
BRITE hierarchy
Motif
Pfam:
TRIF-NTD
TIR_2
Motif
Other DBs
NCBI-GeneID:
121540557
NCBI-ProteinID:
XP_041705455
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All DBs
Position
26:complement(39289244..39292614)
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AA seq
667 aa
AA seq
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MSEMDREAHAEDEPRGGTGLVDAFKILSKVPYERQLSLTFKLGGSLAEELVHAMSLISLG
KRSEALDKLQALGDNNIIANHLVEKVRMCGVKLEDLTVSIVPFQDSTVGTLADLARIFKV
LAEERLCDSSLRDLAYQTALATCKHNNSGEESSESEYIQMQLREEAKRVCGPQIEDTVRG
KCFPKDSSSGLCSIPPLDQGSTALQKSGFPNQTGSGHSPPSSLRDDTSICSYPTHLEISV
SETVGFKTSNIPSQPPPPMNLEPVQSPVPNCGTNTGDEGAFKYFSRVTSRDTPPTQNVPE
PVKGEMDRVTSVAVSREHRTGSEEVRVSPLSPFSFTPAHTKFDNPESPNAHSEPCPKNNL
VPTSNTNRPTSHPTTTEPVSASVPLKTPNQKMEEEEEAFFSFVILHAAEDKDMAEKFKEK
LEAIVVGEGATFSQEFAVPGRNTLMCVEDAINNSAFTILMLTRNFNTRLLEVETSSALMN
AIENRHKYNTVIPFLPQENRMPRENMPKVLRIFIPLEEGNAFEKKAKRAMAPAKIAQQRT
VWLSEQAVKAQVRRQERLRLEEKLQMDFIRECQETKRLENEKMQRYLLQQQLANQPSTPA
MPHFTAPFLGSMPVNVSNMSVTPQQDGWSHPSGNIHIQNARYIMFGNDSKMTVRQGGDSS
GDEDDRF
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagatggacagggaagctcatgcagaagatgagcccagaggagggactgggtta
gtggatgcctttaagatcctctctaaggtcccatatgagagacagctaagcctgactttc
aagttgggtggcagcctggctgaggagctggtacatgccatgtctctcatcagcctcggg
aagcggtcagaggcactggacaagctccaggctttgggagacaacaacatcattgctaac
catctggttgaaaaggtgagaatgtgtggagtcaagttggaggacttaacagtgagcatt
gttcctttccaagactctaccgttggcaccttagcagacctagcgaggattttcaaggtg
ttggctgaggagaggttgtgtgactcatctctgagggatttggcttaccagacggctcta
gccacatgcaagcacaataacagtggtgaagagagttctgaatcagaatacatacagatg
cagctgagagaggaagccaaacgggtctgcgggcctcagattgaggacacagttaggggg
aagtgtttccctaaggactcctcatcaggactttgctccatccccccactggaccaaggg
agcacagctttacaaaaatcaggctttcccaatcagacaggaagtggtcacagtccgccg
tcctccctacgggacgacacctccatatgttcctaccctactcacttggagatcagtgta
tccgaaacggttggctttaaaacaagcaacatcccttcccagcctcctcctccaatgaat
ttggagcctgtgcaatcacctgttccaaattgtggtacaaatacaggagacgaaggtgca
tttaaatacttttccagggttacttctcgggatacaccacccacacaaaatgtgcctgag
cctgttaaaggagaaatggacagagttacaagtgttgcagtgtctcgcgaacacagaaca
gggtcagaggaggtgagagtttcacccctttctcctttctcttttactccagctcacact
aagtttgataaccctgagagtccaaacgcacattccgaaccatgtccaaaaaataacctt
gtgcctacctcaaacaccaataggccaacttctcatccgactaccactgaaccagtgtca
gcaagtgttccattgaaaacaccaaatcagaagatggaggaggaggaggaagcgtttttc
tcctttgtcatcttgcatgcagcagaggacaaggatatggctgagaagtttaaagagaaa
ctagaggctatagttgtaggtgaaggagcaaccttctctcaggaatttgccgtcccaggc
aggaacaccctcatgtgtgtggaggatgccatcaacaattcagccttcactatcctgatg
cttactcgcaacttcaacacccgtctgctggaggtagaaaccagttctgcgctcatgaat
gccattgagaaccggcacaagtacaacactgtcatcccttttctgccacaggagaaccgt
atgccccgagagaacatgcccaaagttctgaggatctttattccgttagaggaaggtaat
gcctttgagaaaaaggcaaaaagggccatggctccagcaaagattgctcaacagaggacg
gtgtggttgagcgagcaggcagtgaaggcgcaggttaggagacaggagagactacgacta
gaggaaaagcttcaaatggatttcattcgtgaatgtcaggagacgaaaaggctagagaat
gaaaaaatgcagagatatttgttgcaacaacaacttgccaatcaaccctcgactcccgca
atgcctcactttactgctccatttttaggaagtatgcctgtaaatgtgtccaatatgtca
gtgacaccacagcaagatgggtggagtcacccatcaggaaacatccacattcagaatgct
cgctatatcatgtttgggaatgactctaaaatgactgtcagacaaggtggggacagcagt
ggggatgaagatgacaggttctaa
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