Coregonus clupeaformis (lake whitefish): 121540603
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Entry
121540603 CDS
T08357
Name
(RefSeq) peroxisome proliferator-activated receptor alpha
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03320
PPAR signaling pathway
cclu04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121540603
03320 PPAR signaling pathway
121540603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121540603
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121540603
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121540603
Nuclear receptors [BR:
cclu03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
121540603
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121540603
NCBI-ProteinID:
XP_041705539
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Position
26:28643762..28704067
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AA seq
469 aa
AA seq
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MVDMESHCRPPSPLEDSVLGSPLCGDFIGGMEELQDISQSIDGDAHSSFDVPEYQSQSSN
GSGSEGSTILDALTPASSPSSGVYGAIAGQEEFSSTSLNLECRVCADRASGYHYGVHACE
GCKGFFRRTIRLKLEYDKCERRCKILKKNRNKCQYCRFQKCLSVGMSHNAIRFGRMPQSE
KLKLKAEIQTGDREVEDPQQADQKTLARHIYEAYLKNFNMNKAKARTILTGKTSTPPFVI
HDMETLQLAEQNLVAKMVGTAGGHLLEKEAEVRIFHCCQCTSVETVTELTEFAKSVPGFS
SLDLNDQVTLLKYGVYEALFALLASCMNKDGLLVAYGSGFITREFLKSLRRPFSDMMEPK
FQFAMKFNGLELDDSDLALFVAAIICCGDRPGLVNVGHIERMQENIVQVLRLHLLANHPD
DTFLFPKLLQKLSDLRQLVTEHAQLVQEIKKTEDMSLHPLLQEIYRDMY
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacatggagagccactgccggccgccgtcccccctggaggattcggtgctgggc
agcccgctgtgtggggacttcatcgggggcatggaggagctgcaggacatctcccaatcc
atcgacggtgacgcccacagctcctttgacgtccctgagtaccagtcccagtcgagtaac
ggctctggctctgaaggatccaccattctagatgctctgaccccagcctccagcccgtcg
tcgggagtgtatggggcaatcgcagggcaggaggagttctcctccacctctctcaacctg
gagtgtcgggtgtgtgccgaccgcgcctccggataccactacggcgttcacgcctgtgag
ggctgcaagggtttctttcggcggaccatccgcctcaagctggaatatgacaagtgtgag
cgccgctgtaagatcctgaagaagaaccggaacaagtgccaatactgccgcttccagaag
tgcctgtctgtgggcatgtcccacaacgcgatccgttttggtcggatgccccagtcagag
aagctgaagctgaaggcagagatccagacgggggacagggaggtggaggacccccagcag
gccgaccagaagaccctggccaggcacatctacgaggcctacctcaagaacttcaacatg
aacaaggccaaagcacgcaccatcctcaccggaaagaccagcactccaccatttgtcatc
cacgacatggagacgctgcagctggcagagcagaacctggtggccaagatggtgggcacg
gccgggggccatctgctggagaaggaggctgaggtccgcatcttccactgctgccagtgc
acctccgtggagacagtcacagagctgactgagttcgccaagtctgtccccggcttctcc
agcctggacctgaacgaccaggtgactctgctgaagtacggagtgtacgaggcactgttc
gccctgctggcctcctgtatgaacaaggacggcctcctggtggcctacggatcgggcttc
atcaccagggagttcctcaagagtctgaggaggcccttcagcgacatgatggaacccaag
ttccagttcgccatgaagttcaacgggctggagctggatgacagtgacctggccttgttt
gtggccgccatcatctgctgtggagaccgtcctggcctggtgaacgttggccacatcgag
cgaatgcaggagaacattgttcaggtgctgcggctccacctgctggccaaccacccagac
gacaccttcctcttccccaagctgctgcagaaactgtccgacctccggcagctggtcacc
gagcacgctcagttggtccaggagatcaagaaaacagaggacatgtcgctccaccccctg
ctgcaggagatctacagagacatgtactga
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