Coregonus clupeaformis (lake whitefish): 121540614
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Entry
121540614 CDS
T08357
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121540614
Enzymes [BR:
cclu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
121540614
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
121540614
Prokaryotic type
121540614
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
121540614
NCBI-ProteinID:
XP_041705562
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All DBs
Position
26:29595571..29610663
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AA seq
644 aa
AA seq
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MADAEPMLLPAPGGEKRACPASEDEVDHSTKRPRVQKDEKNGGGHSHKPVQDEAEEPEGE
ETEPLEEEDGEGAGLGSGEAFAEMMKHGLTELDVGILKFVSEHKGFSGILKERYSDFVVH
EVNKEGKTVRLDDLSVPEEAEEATVAEQPGSEVFTEEQKQDLEQLQLFKNKEGNVSIEVA
DDTKEKRTLVHKAVKTLYPGLETKTEEREGKKFIVAYHAAGPKALAAPRKHSWPKSRGAF
CHFVLYKENKDTMEAINVLSKFLRMRPNVFSYMGTKDKRAITVQEIAVLKVTAERLSHLN
KCLNNFKLGNFCYKKHPLKLGELQGNHFTVVIRNITGTDEQVQQAMTSLRDTGFINYYGM
QRFGTTAVPTHQVGKAILQDNWNEVIDLILKPRPGAEKGYLVKCREEWAQSQDPEAALKK
LPVKRCVEGQLLRGLSMYGKKNIITAFAMIPRNNRLMYIHSYQSFMWNTMVSRRIEAFGL
KAVEGDLVLRGGTAFVLSAAEAETHSIQDVVMPLPGFDVIYPTHHVGKGYGEMLSADNLD
IDNMRHRVRDYSLAGAYRRILIKPSDVSWEVINYDDPRISLVHTDVEKLEDQPPPVFNKE
GKYRALRMEFSLPPSTYATMAIREVLKMDTSIKNQTQLNTTWLN
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcagagcccatgctgctccctgcccctgggggggagaagagggcctgccct
gcctcggaggatgaggtggaccacagcaccaagagacccagagtccagaaggatgagaag
aacggaggaggacactctcacaagccagtccaggatgaggcagaagagccagagggggag
gagacagagccattggaagaggaggatggagaaggggccgggttagggtctggagaggct
tttgcagagatgatgaagcatgggctcacagagctggatgtggggattctgaagtttgtc
agtgaacacaagggcttctctgggattctcaaggagaggtactctgactttgtggtgcat
gaggtcaacaaagaaggcaagacagtgcggttggatgatctctcggttcctgaggaggct
gaggaggccactgtggcagagcagccagggtctgaggttttcacagaggagcagaaacaa
gatcttgagcagctgcagctcttcaagaacaaagaaggcaatgtgtccatagaggtggcg
gatgataccaaagagaagcggaccctggtccacaaagccgtcaagaccctgtaccctgga
ctggagaccaagacagaggagcgggagggaaagaagttcatagtggcctaccacgcagcc
gggccgaaagcactcgcagcccccaggaaacactcctggcctaagagccgtggggccttc
tgccactttgtcctttacaaggagaacaaggacaccatggaggccatcaacgtgctctcc
aagttcctcaggatgaggcctaatgtgttctcctacatggggaccaaggacaagagagcc
atcactgtgcaggagattgcggttctcaaggtcacagcagaaagactgtctcacctcaac
aagtgtctcaataacttcaagctgggaaacttctgctacaagaaacaccctctgaaactg
ggggaactacagggcaatcacttcactgtggtcatcaggaacatcaccgggacagatgag
caagtccagcaggccatgacctccctcagagacacaggcttcatcaactactacggcatg
cagcgctttggcaccaccgccgtgcccacacaccaggttggcaaggccatcctgcaagac
aactggaatgaagtgatagatctgatcctgaagcctcgccctggagcggagaaaggttac
ctggtgaagtgtcgtgaggagtgggcccagtcccaggacccagaggcagcgctgaagaag
ctgcctgtgaaacgctgtgtggagggacagctgctccgtggcctctccatgtacggcaag
aagaacatcatcactgcattcgccatgatccctcgtaacaaccggctgatgtacatccac
agctaccagagctttatgtggaacaccatggtcagcagacgcattgaggccttcggactg
aaggctgtggagggagacctcgtgctcagaggaggcactgcattcgtgctgtctgcagcc
gaggcagagacccactctattcaggacgtggtgatgcccctaccagggtttgatgtcatt
taccccactcaccacgtggggaagggctatggggagatgctgagtgcagataacctggac
attgacaacatgagacacagggtgagggactactctctggccggagcctaccgacgtatc
ctcatcaaaccaagtgacgtcagctgggaggtgattaactatgacgaccctcgtatctct
ctggttcacactgatgtagagaaactagaggaccaacctcctccggtcttcaacaaagag
gggaagtacagggctttgaggatggagttctctctgcctccctccacctacgccaccatg
gccatcagagaggtgctcaagatggacaccagcatcaagaaccagacccagctcaacacc
acctggctcaactaa
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