Coregonus clupeaformis (lake whitefish): 121540672
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Entry
121540672 CDS
T08357
Symbol
man2c1
Name
(RefSeq) alpha-mannosidase 2C1 isoform X1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
121540672 (man2c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121540672 (man2c1)
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
121540672 (man2c1)
Membrane trafficking [BR:
cclu04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
121540672 (man2c1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Ams1-like_1st
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Glyco_hydro_57
DUF237
Motif
Other DBs
NCBI-GeneID:
121540672
NCBI-ProteinID:
XP_045063759
LinkDB
All DBs
Position
26:33819491..33933284
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AA seq
1039 aa
AA seq
DB search
MYHQPVLKNRRTLLERAEKFISEIYFTDCNLRGRLYGDTCPLESLSSSLSQKRIPFPQAV
KQNFEPYQVGDTFGPTWWTCWFKVSLRIPESWRGKQVHLRWESDGEAMVWRDEQPVQGLT
KEGEKTSYILTECLMDDEPHSISLYVELACNGLFGAGKGSMIAAPDPDRKYSVQKAELVV
FKPEVRELLTDLEMLVDMVKLLGEGEQRGYQALFTANEMVNLCEPTNPSSFPAARSLAQK
FFSQRNGQSQHTVHAMGHCHIDSAWLWPYEETIRKCARSWVTVIRLMEKNPHMVFTCSQA
QQFDWVKSWYPDLFSQIQHYVKKGQFIPVGGTWVEMDGNLPSGESMVRQFLEGQRFFKQE
FGNYCKEFWLPDTFGYSAQLPQLMQGSGITRFLTQKLSWNLVNIFPHNTFFWEGLDGSQV
LTHFPPGNSYEMKGKVEDLVNTVKNNKDKGRANHSAALFGFGDGGGGPTQLMLDRLDRVQ
DTDGLPRVQMSSPDRLFSELEADSSLLCTWTGELFLELHNGTYTTQAQIKLGNRQCETLL
HDVEVASSLALCLDKTFQYPSQPLQILWSVLCFRLLLLNQFHDVIPGSCIEMVVEEALRY
YQDIRTVGTRLLRVSCEALGATGAAPRTGDSAVLNTLPWERTEVLPLTGGAPDLQQPGLA
LVTVPSVGVVSVCEATGTKPVTLVSVTVQADGTVLMENGILRAVVNKDGCLASLYLVKTN
REAISDGCRGNQFVVFDDVPLYWDAWDVMDYHLQTRKPVVEVVSPVQIASPGGLRGSVTF
TLRISDKSTITQEIILDAMCPYIRLNTQVEWLESHKFLKVEFPVRVRSPNATYEIQFGHL
QRPTHRNTSWDWARFEVWGHKWADLSEHGFGVSLLNDSKYGYSVHQNTMTLSLLRAPKAP
DANADMGSHQFTYAVMPHTGTFQEASVIQYAYNLNYPLRLIDHSPGSAVWSAFSVSAAAV
ILETIKQAEDRKDALVVRLYEAHGSSVTASLSTRLPVTEAWHCDLLERVDPSRPAPITAS
GISINFSPFQIVSLLLYLK
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgtatcatcaaccggtactgaagaaccgacggactcttctggaacgagctgagaaattc
atatctgagatttatttcaccgactgcaaccttaggggaaggctatatggagacacctgt
cccctggagtccctctcctcctccctgtcacagaaacggatcccattcccacaggctgtc
aaacagaactttgagccatatcaagttggtgatacctttggacctacatggtggacatgc
tggtttaaagtatctctgaggataccagaatcctggagagggaagcaggtccatctgcgc
tgggagagtgatggagaggccatggtctggagggatgagcagccagtacaggggttgacc
aaagaaggggagaagaccagctacatcctgactgagtgtctgatggatgatgagcctcac
agcatctccctgtacgtagagctggcttgtaacggtcttttcggagcgggtaagggatcc
atgattgcagcacctgacccagacaggaagtactctgtccagaaggcggagcttgtagtg
tttaagccggaagtcagggagctgttgaccgacttggagatgctggttgacatggttaag
ctgctgggtgagggggagcagcgtgggtaccaggctctgttcacagccaatgagatggtg
aacctgtgtgagccgaccaatcccagctcatttcctgcggcccggagtctggctcagaag
ttcttcagccagaggaatggacagagccagcacactgttcacgctatgggacactgtcac
attgactcagcctggctttggccctatgaggagaccatcaggaagtgtgctaggagctgg
gtgactgtgatcagactgatggagaagaatcctcatatggtcttcacctgttcacaggcg
cagcagtttgactgggtgaagagctggtatccagacctgttctctcagatccaacactac
gttaaaaagggccagttcatccctgtaggaggcacctgggtggagatggatggaaatctg
ccgtcaggtgagtccatggtcagacagttccttgagggacagcgattcttcaagcaagag
tttggaaactactgcaaagagttctggctgcctgatacgtttggctactcggcccagcta
ccccagttgatgcagggttcaggcatcacacgattcctgactcagaaactcagctggaac
ctcgtcaacatcttccctcacaacacattcttctgggagggtctggatggttctcaggtt
ctgacacactttcccccagggaactcttatgagatgaaggggaaggtagaggacctggtc
aacactgtgaagaacaacaaggacaaaggacgagccaatcacagcgcagcactgtttggt
tttggagacggaggaggagggcccacccagctgatgttggacagactggacagggtccag
gacacagacggactgccccgggtccagatgtccagccctgaccggctcttctctgagctt
gaggcggactcctctctgctgtgtacctggactggagaactgtttctagaactacacaat
ggcacctacaccacacaggcacagatcaagctagggaatcgtcagtgtgagacattgctc
catgacgttgaggtggccagcagcttggcactgtgtctggacaagactttccagtacccc
tcccaaccactgcaaatcctctggagtgttttatgtttcaggctgctgctgctgaaccag
ttccacgatgtgatccctggcagctgtatagagatggtggtagaggaagcactgcgatat
tatcaagacatccgcaccgtggggaccagactgctgcgtgtctcctgtgaggccctgggc
gctacgggggctgcaccccggacaggagactcggctgtcctcaacactctgccctgggaa
cgcactgaggtcctcccactgacagggggcgctcctgatctacaacaaccaggcctagct
ctggtgacagtccccagtgttggtgtcgtgtctgtctgtgaagccactggaaccaaacct
gtcactctggtctctgtcacggttcaggctgatggtactgtcctcatggagaatgggatc
ttacgtgctgttgtgaataaggatggatgtctggcttccctgtacctggtcaagactaac
agagaggcgatatctgacggttgccgtgggaaccagtttgtggtgtttgatgatgttcct
ctgtactgggacgcctgggacgtgatggactaccacctccagacgcggaagccggtggta
gaggtggtgtctcctgtccagatagcatctccaggaggactgaggggcagtgtgaccttc
actctcaggatcagtgataagagcaccatcacccaggagatcattctggacgccatgtgt
ccttatatcaggttaaatactcaggtggagtggttagagtcccataagttcctgaaggta
gagttcccagtcagggtgaggagccccaacgccacctacgagatccagtttggacacctg
cagagacccacacacaggaacaccagctgggactgggcccgcttcgaggtttggggccac
aaatgggcagacctatcagagcacggctttggagtgtctctgctgaacgacagtaaatat
ggatactcagttcaccagaacaccatgacgctctctctactgcgagctcctaaggctcct
gatgccaacgctgacatgggcagtcatcagttcacctacgctgtcatgccacacacagga
accttccaggaagcgtcagtcatccagtatgcctacaacctcaactaccctctgaggcta
atcgaccattcccccggctctgcagtctggagcgccttctctgtcagcgctgcagccgtc
atcctggagaccatcaaacaggcggaggacaggaaggatgctctggtggtgcgtctctat
gaggcacatggtagcagtgtcacagcgtccctctctacacgcctccccgtcacagaggct
tggcactgtgatctactggagcgagtggatccctctcgccctgcaccaatcacagcctcc
ggaatctctatcaacttcagtcccttccagattgtgtcccttctactttacctaaagtaa
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integrated database retrieval system
