Coregonus clupeaformis (lake whitefish): 121540697
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Entry
121540697 CDS
T08357
Name
(RefSeq) cadherin EGF LAG seven-pass G-type receptor 1-like
KO
K04600
cadherin EGF LAG seven-pass G-type receptor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04310
Wnt signaling pathway
cclu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121540697
09133 Signaling molecules and interaction
04519 Cadherin signaling
121540697
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121540697
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121540697
04515 Cell adhesion molecules [BR:
cclu04515
]
121540697
Peptidases and inhibitors [BR:
cclu01002
]
Mixed peptidases
Family P2
121540697
G protein-coupled receptors [BR:
cclu04030
]
Adhesion receptor family
Cadherin EGF LAG (CELSR)
121540697
Cell adhesion molecules [BR:
cclu04515
]
Cadherins
Major cadherins
121540697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
7tm_2
Cadherin_CELSR2_9th
Laminin_G_2
GAIN
GPS
Ig_CLSTN
Laminin_G_1
Cadherin_FAT4_N
EGF
Ig_Cad99C_N
EGF_laminin
EGF_TEN
Fibulin_C
hEGF
Dicty_CAR
Phage_tail_terminator_9
Motif
Other DBs
NCBI-GeneID:
121540697
NCBI-ProteinID:
XP_045063778
LinkDB
All DBs
Position
26:complement(36969665..37045305)
Genome browser
AA seq
3044 aa
AA seq
DB search
MALQMLWPWICFLSHVLVIACFDVHVSDTLQPGVVLGNVSLGRGWIYQIDRTLTPKYVRH
IFNIERQHGIVYFSGKVNCALLPKNPAPLYIQIKSSTSDNFILIHFNTFVHGQNCFIKYR
RKITEGKPQIYMNILSKVETYPCVSKSILLLNIYEHLPLFTRKPNSYHSLCKGGNWKLVF
DNGSVLPNCLQPNERNGLDLLCRVQHLWNYTTVRVKVRFNYLHSHAMFTDGDLGRLGSWT
KRKKRHVNTAPQFQLPNYQVSVPENEPAGTRVITLKALDTDDEDAGEVEYDMEALFDSRS
NDYFQINLQTGSITTLQPLDREVKDTHVFKVIATDNGTPKRSATAYLTITISDTNDHGPV
FEQTEYRVSIRENVEIGFEVLTIRATDGDAPSNANMIYKIVNEGEDNAGFEIDPRNGLVK
IRVRPDRETLTQYQLIVEANDQGKDPGPRSATATVYISVEDENDNYPQFSEKRYVVQVLE
SVAVNTKVAQVKATDKDEGNNAKVHYSIISGNVKGQFYIHSPTGVIDIINPLDYEMIREY
NLRIKAQDGGRPPLINGTGIVVVQVVDVNDNAPMFVSTPFQATVLENVAVGCSVIHIQAI
DADSGDNSHLEYRLTAMAPGFPFIINNSTGWVTVSVELDRETTGFYTFGVEAVDHGVPAM
SSSASVSVTVLDVNDNVPTFTQRLYSLKINEDAVVGTSVLALSAIDRDANSVVTYQISSG
NTRNRFAITSQTAGAVITLALPLDYKQERQYVLTVTASDGTRYDTAQVFINVTDANTHRP
VFQSTNYQVMIGEDRPVGSTVVVISATDEDTGENARISYVMEDNVPQFKINPDTGAITTQ
IEIDYEDQASYTLAIIARDNGIPQKSDTTYVEIIVLDANDNAPQFLRDIYQGTVFEDAPV
YTSVLQISASDRDSGSNGRLSYTFQGGDDGEGDFFIEPYSGIIRTARKLDRENVPVYNLK
AFAVDKGVPPLKAAVDVQVSVLDINDNAPVFEKDELYVYVVENSHVGSIVARITATDPDE
GTNAQILFQIVEGNVPEVFQLDIFNGDLIALTDLDYESKVEYTIIVQATSAPLVSRAIVH
IRLLDVNDNDPVLRDFEIIFNNYVTNRSNSFPAGVIGKVPAQDPDVSDNLHYSFVEGNEL
SLLILNKDTGDLRLSRDLDNNRPLEATMKISVTDGVHRVTALCTLRVTIITDDMLTNSIT
VRLENMSQERFLSPLLALFMEGVAAVLSTRPNSVFVFNIQKDTHVQGSILNVTFSALRPT
GGSGGTIPPGPFFPSEALQEQIYLNRTLLTLVSSQRVLPFDDNICLREPCENYMKCVSVL
RFDSSAPFVSSNTVLFRPIHPVTGLRCRCPAGFTGDYCETEIDLCYSGPCQNNGKCRSRE
GGYTCVCPEEFTGDHCEVNSRSGRCVPGVCKNGARCVDLLVGGFVCQCPPGEYQKPYCEM
STRSFPGQSFITFRGLRQRFHFTVSFMFATRERNALLLYNGRFNEKHDFIALEIIEEQIQ
LTFSAGEAKTTVLPFVLSGVSDGQWHRVQLHYYNKPNIGRLGIPHGPSGEKVAVVAVDDC
DIAMAIGFGGQIGNYSCAAQGTQTGQKKSLDLTGPLLLGGVPNLPEDFPVRNRDFVGCMR
DLTIDSKPVDMASYVANNGTDAGCTAKKDYCTQSMCLNGGVCVNKWSTYSCGCPLGYGGK
NCEQVMPSPQHFDGHALVWWREPEVTISVPWYMGLMFRTRQSSGTLLQANAGDFSKIHLL
ISGRHVRFQVFLGVKRVALLDFSQVRVNDGEWHHVLVELKSIKDGKDIKYMALVSLDYGM
FQRSVEIGNELPGLRLRSLFVGGLRKEDGTVQSGLKGCMQGVRMGETSTNLANVNMLQGQ
KVRVEDGCEVANPCTANVCPEHSRCTDNWSSHTCMCHPGYFGRDCVDACLLNPCQRVSTC
VRQPSSPHGYSCQCDHNSYGQYCQNKANLPCARGWWGNPVCGPCNCDVSKGFYRDCNKTT
GDCRCKDNYYRPEGGDTCYSCECFQVGAMSRSCHPHTGQCQCRTGVIGHQCNRCDNPFAE
VTSSGCMVVYEGCPKAFDAGIWWPKTQFGQPAAMKCPKRSTGTAIRHCSDENGWLPPDLF
NCTSLTFSQLKKEDEELQLNSSRMDGERSKGMASMLRSATNRTADLQGNDVKTAYSLLTR
LLQYESQQLGFDMATTRDIHFHENMVRAGSAILDPANRGHWEQIQRSEGGTALLLHSFED
YAQALAQNMRKTYLKPFTVVTENMIVSVDYLDPSRPERTNIPHFQEIQEAYSKEMESSVR
FPEFPTQHEQPKEVKAVSIATATDATATNAPPVQAESTESSTVGHQASAKKKRRHAEVPG
PLPVAVVIIYRTLGQLLPENYDIDRRNLRLPKRPIINTPIVSTVVYSEGVPLTPLLAQPI
TLEYTLLETEERTKPVCVYWNHSILVQGTGGWSARGCELVFRNSTHISCQCSHMSSSAVL
MDISKREHGEVLPLKIITYTTVSASLVALLITFLLLAILRKLRSNLHSIHKNLVVSIFLS
QLVFLFGINQTENVFMCTVVAVLLHYFYMCTFAWMFVEGLHIYRMLTEVRNINHGRMRFY
YAIGWGIPAIITGLAVGLDPEGYGNPDFCWLSVHDTLIWSIAGPIAIVVLVNIALFFLAA
KASCGKRQWTLEKSEAIATWVLGLMAVNSDILSLHYLFAIFSCLQGICIFFFHCVFNKAV
RTNLKNVLTGRKSIVEEYTATRSTLLTRSLNAKHSYTEEDSLYRTAIGESTASLDSTVRS
ARSFSRSQARNDSGQKRTTSSGSTKNSYRGEGDSCIFLRKRSKRDDSDSDSELSVDEHSS
SYASSHSSDSDDHRGSRKHRWNNERPPQRNTPKVETEANHVKPYWPVEPPTASESEEPCG
VETLRVETKVNVELHQDNKVNRESPSQNDSAPPSSPDCNQTEKRRGILKNKITSPPPLTD
KNMKNRLREKLSDYNPPSISPRTTPVPPSPVSPHLRPVTGGNGVFIKSPPRPLVPPRPPL
SPRDLHNGIVMTTTRTMMSPLVNGVNGIQDAQDLDSDGSNETSI
NT seq
9135 nt
NT seq
+upstream
nt +downstream
nt
atggcattacaaatgctttggccatggatatgttttctatcacacgttctagtaattgca
tgttttgatgtacacgtttcggatactttgcagcctggagtagtgctcggaaatgtatct
cttggacggggttggatctatcaaatagacaggacgttaacccctaaatatgtgagacac
attttcaatattgagagacaacatggaattgtatatttctcaggaaaagttaattgtgcg
ctgttgccgaagaacccagcgccgctttacattcagatcaaatcaagtacctcggataac
tttattttaattcacttcaatacttttgtgcatggacagaactgtttcattaaatatagg
agaaagataaccgaaggtaagccccagatttacatgaacattctctcaaaagtagagaca
tatccatgcgtctcaaagagtattttgcttttgaacatttatgaacatttaccactattt
actcgaaaacctaattcttaccattcattatgtaagggagggaactggaaattagttttt
gataacgggagtgttttgccaaactgtctgcaacccaatgagcgaaacggattggattta
ctctgcagggtgcaacatctttggaattacaccactgttcgtgtgaaagtgcgatttaat
tatcttcatagtcatgccatgtttacagacggggatttagggagactgggttcatggacc
aaacgtaaaaaaagacatgtgaacaccgctccccagtttcaactgcccaactatcaggtg
tctgtcccggagaatgaacccgcgggaactcgcgtaattacgctcaaagcactggatacc
gacgatgaagatgctggtgaagtggaatatgatatggaagctctgttcgatagcagatcc
aatgattatttccaaatcaatttgcagaccggcagcattacaacgttgcagcctttggac
agggaggtcaaggatacacatgtcttcaaagttattgctacagacaatggcacccctaag
aggtcggccactgcttacctcactatcactataagtgacactaatgatcatgggcctgtg
tttgagcagacagagtacagggtcagcattagggaaaatgtggagataggttttgaagtg
ttgactataagggccacagatggggatgccccatcaaatgccaacatgatctataagatt
gtgaatgagggggaagataatgctggttttgaaatcgatcctagaaatggactagtcaag
attagggttcggcctgacagagaaaccttgacccagtatcagctgatagtggaggccaat
gatcagggtaaagacccaggcccccgcagtgccacggctacagtgtatatctctgtggag
gatgagaatgacaactacccccagttcagtgagaagaggtatgtagtccaggtgcttgag
agtgtggcagtgaacaccaaagtggcccaggtgaaggccacagacaaagacgagggcaac
aatgcaaaagtccactacagcatcatcagtggcaacgtgaagggccagttctacatccat
tcccctacaggtgtcattgacataatcaaccccctagattatgagatgatcagggaatat
aatttgagaataaaggcacaggatgggggcagaccacctctgattaatggcacagggata
gttgtagtgcaagttgtggatgtcaacgataacgcccctatgtttgttagcacacccttt
caagccacagtattggaaaatgtggccgttggttgttctgtgatccatattcaggctatt
gatgcagactccggtgacaactctcatttggagtacagactaacagctatggctccagga
ttccccttcatcatcaacaacagcacagggtgggttacagttagtgtagaacttgacagg
gagaccaccggcttttacacgtttggcgttgaagcagtggatcatggggtccctgccatg
tcctcctcggccagcgtcagtgtgacagtgctcgacgtgaacgacaacgtccccactttt
actcagaggttgtatagcctgaagattaatgaggatgctgtggtgggtacgagcgtgcta
gcactctctgccatagatagggacgccaacagtgtggtaacataccagatttccagcggc
aacacgcggaacaggtttgccatcaccagtcagactgcaggggcagtcatcaccctggca
ctgccactggactacaaacaggagcggcagtatgtcctgacggtgacagcctcggatggc
acgcgttacgacacagcacaggtctttatcaacgtcactgatgccaacacccaccggccc
gtgttccagagcaccaactaccaggtgatgattggcgaggaccggcctgtgggctccact
gtggtggtgatcagtgccacggacgaggacacaggggagaacgcacgcatcagctatgtt
atggaggacaacgtgccacagttcaagatcaaccctgacacaggtgccataaccacgcag
atagaaatcgactatgaggatcaggcctcctacacattagctatcattgcccgtgacaac
ggcatcccccagaaatctgacaccacatatgtggagatcatcgttctggatgctaacgat
aacgcgccacagttcctcagggacatataccaggggacagtgtttgaggatgcacccgtg
tataccagcgtcctccagatttctgcatctgacagggactcggggtccaatgggaggctt
agttacaccttccagggtggggatgatggagagggtgacttcttcattgagccgtactct
ggcattattagaacagccaggaaacttgacagggagaatgtgcctgtgtacaatctgaag
gcctttgctgtggataagggggttccgcctcttaaggcagccgtggacgtccaagtgtcc
gtcctggacatcaatgacaatgctcctgtgtttgaaaaggatgaactgtacgtctatgtg
gtggagaacagtcatgtgggttccattgtagcccgcatcactgctacagatcccgacgag
ggaaccaatgcgcaaatcctgttccagattgtggaaggaaatgtcccagaggtcttccaa
ctagacatcttcaacggggatcttatcgctctcactgatttagactacgagtccaaggtg
gagtacacaatcattgtccaggcgacctctgcaccattagtcagccgcgccatcgtgcac
atccgcctgctggacgtcaacgacaatgaccctgtcctacgtgactttgagatcatcttt
aacaactacgtcaccaacaggtccaacagctttccggctggggtgatcgggaaggttccg
gcccaggacccggatgtgtcagataacctccactacagttttgtggagggcaatgagctg
agtctactaatcctgaacaaggacaccggggacttgaggctgagcagagacctggacaac
aaccggccccttgaggccaccatgaagatatcagtcacagacggtgtccaccgtgtcacg
gcactctgcaccctgcgtgtcaccatcatcaccgacgacatgctgaccaacagcatcacg
gtgcgcctggagaacatgtcccaagagcgcttcctgtccccgctgctcgccctcttcatg
gagggcgtggcggcggtcctgtccacccgccccaacagcgtctttgtcttcaacatccag
aaggacacccacgtccaggggagcatcctcaacgtcaccttctccgccctgcgccctact
gggggatccgggggcaccatcccccctggacctttcttcccctcagaagccctgcaggag
cagatttatctgaaccggactctgctcaccctggtgtccagccagcgtgtgctgcccttt
gacgataacatctgcctccgcgagccctgtgagaactacatgaagtgtgtgtcggtgctg
aggttcgacagctcggcacccttcgtgtcctcgaatacggtgctgttcaggcctatccac
ccggtgacggggctacgctgccgatgcccagcaggtttcacgggggactactgtgagacg
gagattgacctgtgctactcagggccctgccagaataacggcaagtgccggagcagggaa
ggcgggtacacttgtgtgtgtccggaggagttcaccggtgatcattgtgaggtgaactcg
cgctctggccgttgtgtcccgggggtgtgtaagaacggtgccaggtgtgtagatctgctg
gtgggggggtttgtatgccagtgccccccaggggagtaccagaaaccatactgtgagatg
agcacgcgcagcttccccggccagtctttcatcaccttcagagggctacggcagaggttt
cacttcactgtgtccttcatgtttgccaccagagagaggaatgccctgctgctttataac
ggaaggtttaacgagaagcatgacttcatcgccttggagatcattgaggaacaaatccag
ctcaccttctcagcaggagaagccaaaaccactgtattaccctttgtcctaagtggggtc
agtgatggtcagtggcatagagtacagctacactactacaacaagcccaatattggtcgc
cttggcatcccccacggaccatcaggagagaaggtggcagtcgttgctgtggacgactgc
gacatcgccatggcaattggttttggtggccagatcggaaactactcttgtgccgcccag
ggcacgcagacaggacagaagaagtccctggacctgaccgggccactacttctgggcggt
gttcccaacctgccggaggatttccccgtccggaaccgagattttgtgggctgcatgaga
gacctgactatagacagcaagcctgtggacatggccagttatgtggccaacaatggcacg
gacgcagggtgcacagcgaagaaggactactgcactcaaagtatgtgtctgaacggagga
gtctgtgtgaacaagtggagcacatactcctgtggctgtcccctgggctacggagggaag
aactgtgaacaagtcatgccctccccgcagcacttcgacggccatgccctggtgtggtgg
cgcgagccggaggtcaccatcagtgtgccctggtacatgggcttgatgttcagaaccagg
cagagctctggcaccctgctgcaggccaacgctggggacttctccaagatacacctcctg
atcagcggcagacatgtgcgtttccaggtgttcctgggggtgaagcgggttgccctgctg
gacttctctcaggtcagggtgaacgacggggagtggcaccacgtcctggtggagctgaag
agtatcaaagacgggaaggacatcaaatacatggccctggtatcactggactacggcatg
ttccagaggtcagtggagataggcaatgagctgccaggactgaggctgaggagtctgttt
gtgggggggctgaggaaggaggatgggacagtccagagcggactcaagggctgcatgcag
ggcgtgcggatgggcgagacgtccaccaacctggccaacgtcaacatgcttcagggtcag
aaggtccgagtggaggatggttgtgaggtggctaacccctgcaccgctaacgtctgccct
gagcacagccgctgcaccgacaactggagctcacatacctgtatgtgccaccccgggtac
tttgggagggactgtgtggacgcgtgtctcctgaatccctgtcagcgtgtgtccacctgt
gtccgccagcccagttccccccatggctacagctgccagtgtgaccacaactcctacgga
cagtactgccagaacaaagccaacctaccctgtgctcgtggctggtgggggaaccctgtc
tgtggcccatgtaactgtgatgtcagcaaagggttctaccgagactgcaacaagaccact
ggggactgccgctgtaaggataactactaccggccagagggaggggacacttgctactcc
tgtgagtgtttccaggttggcgccatgtcacgctcctgccaccctcacacgggccagtgt
cagtgcaggaccggcgtgatcgggcaccagtgtaaccgctgtgacaacccctttgccgag
gtcacctccagcgggtgcatggttgtatatgagggctgtcccaaggcctttgatgcaggg
atctggtggccaaagacccagtttggacaacccgctgccatgaagtgtcccaaacgatcc
acaggcacggccatccgccactgcagcgatgagaacggctggctgcctcccgatctcttc
aactgcacctctctcaccttctctcagctgaaaaaagaggacgaggagctgcaactcaac
agctccaggatggacggtgagaggtcaaagggcatggccagcatgctgcgtagcgccacc
aaccgcacggcggacctccagggcaacgacgtgaagacggcctacagcctcctgacccgc
ctgctgcagtacgagagccaacagctgggcttcgacatggccaccacgagagacattcac
ttccatgagaacatggtccgagcgggcagtgccatcctggaccctgctaacagaggacac
tgggagcagatccagcgttccgaaggtggtacagccctactactgcacagctttgaggat
tacgcacaagccctggcccaaaacatgaggaagacctacctgaaaccctttactgttgtc
acggaaaacatgattgtttctgtggattacttggacccgtccaggccagaacggacaaac
atcccgcatttccaagagatccaggaggcctattccaaagagatggaatcttctgtccgc
ttcccagaattcccaacacagcacgagcagccaaaggaggttaaagcagtctcgatagca
acagccacagatgcaacagccacaaacgcgccccctgtccaggctgaatccactgaatcc
agcaccgttggtcaccaggcgtctgccaagaaaaagcgtcgtcacgctgaggtcccaggc
cctctccctgttgccgtggtgatcatctataggaccctgggacagctactgcctgagaac
tacgacattgatcgcaggaacctgagactccccaaaaggcccatcatcaacacacctatt
gtgagcacggtggtctacagtgagggggtgcccttgacccctcttctggcacagcctatc
acactggaatacacactgctggagacagaggagaggaccaaacctgtctgtgtctactgg
aatcactccatcctggttcaaggaacgggaggctggtctgccagggggtgtgagctggtg
ttcagaaacagcacccacatcagctgtcagtgcagtcacatgtccagctctgctgtgctc
atggacatctccaagagagagcatggagaggtcctgcccctgaagatcatcacctacacc
acggtttcggcctcgctggtggccctcctcatcaccttcctcctgctggccatcctccgg
aagctccgctctaacctccacagcatccacaagaacctggtggtgtcaatcttcctctcc
cagcttgtcttcctctttggaatcaaccagactgagaatgtgttcatgtgtacagtggta
gccgtcctgcttcactacttctacatgtgtacgtttgcctggatgttcgtggagggcctt
cacatctaccgcatgctgactgaagtcaggaacatcaaccatggccgcatgaggttttac
tacgccattggctggggcattcctgccattatcaccggcctggcagtagggttggaccct
gagggctatgggaacccagacttctgttggctctctgtccacgacacactcatctggagt
atcgctgggcccatcgctatagtagtactggtcaacattgctttattcttcctggccgcc
aaggcctcgtgcggaaagagacagtggacattagagaagtctgaagcaattgctacctgg
gtcctgggcctcatggcagtcaacagtgacatcctctccttacactacctctttgccatt
ttcagctgccttcagggtatatgcatattcttcttccactgtgttttcaacaaggcggtg
aggaccaacctgaagaatgtcctcacaggaaggaaatccatagtggaggagtatactgcc
acccgctccactctcctcacacgttcactgaatgctaagcattcatacacagaggaggac
agtctgtaccgcacggccatcggagagtccactgcctccctggacagtacagtcagatca
gcccgcagcttcagcagaagccaggccaggaacgactcagggcagaagcgcacaacatcc
tccggctcaaccaagaatagttaccgtggggagggagactcctgcatcttcctccgcaag
cgctccaagagagatgattcagactcggacagtgagctctcggtggatgagcacagcagc
tcctatgcctcgtcccactcctcagacagtgatgatcatagaggaagccgcaagcatagg
tggaacaacgagagaccgccccagcgaaacacacccaaagtggaaacagaggccaatcac
gtgaagccctactggccagtggagccgccgacagccagtgagagcgaggagccctgcggg
gtagagacgctgcgtgtggagaccaaggtcaacgtggagctccaccaggacaacaaagtc
aacagggagtccccctctcagaatgatagtgcccctcccagctcacctgactgcaaccag
acagagaagagaagaggcattctgaaaaacaagatcacctcccctcctcccctgactgac
aagaacatgaagaatcgcctgcgggagaaactgagtgactacaacccccccagcatctcc
cccaggactaccccagtccccccatctcccgtctccccccatctacgccctgtaaccggg
ggcaacggggtcttcatcaaatccccacctcgcccgctcgtgcctccacgccctccgttg
tctccacgggacctgcacaatgggattgtcatgacaacaacgaggacgatgatgtcgcca
ttagtcaatggggtcaacgggattcaagacgcccaggacttggactcagacggtagcaac
gaaacctcaatctga
DBGET
integrated database retrieval system
