Coregonus clupeaformis (lake whitefish): 121540699
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Entry
121540699 CDS
T08357
Name
(RefSeq) receptor-type tyrosine-protein phosphatase eta
KO
K05698
receptor-type tyrosine-protein phosphatase eta [EC:
3.1.3.48
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121540699
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121540699
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cclu04090
]
121540699
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121540699
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
121540699
CD molecules [BR:
cclu04090
]
Proteins
121540699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
PTP_tm
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_4th
Fn3_Dep-1_2nd
PTP-SAK
Tc-R-P
FN3_Tor_3rd
GH101_dom-5
PTPlike_phytase
Y_phosphatase3
PTP-NADK
DSPc
Motif
Other DBs
NCBI-GeneID:
121540699
NCBI-ProteinID:
XP_045063777
LinkDB
All DBs
Position
26:36923105..36967823
Genome browser
AA seq
2592 aa
AA seq
DB search
MNTTTKETAFNVTELTAGVKYTFRVTAVAGDEMTEGKTISVSLFTKPAIIRNLTVTEITT
SSVSLSWIEPLGNRSFYRVEWTGGVRDMNTTTKETAFNVTELTAGVKYTFRVTAVAGDEM
TEGKTISVSLFTKPAIIRNLTVTEITKSSVSLSWIEPLGNRSFYRIEWTNGGRDMNTTTN
ETAFNVTELTAGGKYTFKVTAVAGDNITKGNAQEKALFTKPEVIRNLTVSEITTSSVSLS
WIEPLGNRSFYRVEWTGGVRDMNTTTKETAFNVTELTAGVKYTFRVTAVAGDEMTEGKTI
SVSLFTKPAIIRNLTVNEITTSSVSLSWIEPLGNRSFYRIEWTNGGRDMNTTTNETAFNV
TELTAGGKYTFKVTAVAGDNITKGNAQEKALFTKPEVIRNLTVSEITTSSVSLSWIEPLG
NRSFYRVEWTGGVRDMNTTTKETAFNVTELTAGVKYTFRVTAVAGDEMTEGKTISVSLFT
KPAIIRNLTVNEITTSSVSLSWIEPLGNRSFYRIEWTNGGRDMNTTTNETAFNVTELTAG
VKYTFKVTAVAGDNITKGNAQEKALFTKPEVIRNLTVSEITTSSVSLSWIEPLGNRSFYR
VEWTGGVRDMNTTTKETAFNVTELTAGVKYTFRVTAVAGDEMTEGKTISVSLFTKPAIIR
NLTVTEITTSSVSLSWIEPLGNRSFYRVEWTGGVRDMNTTTKETAFNVTELTAGVKYTFR
VTAVAGDEMTEGKTISVSLFTKPAIIRNLTVTEITTSSVFLNWSKPLGNRSFYRIEWTGG
SRDMNTTTNETAFNVTELTAGVKYTFRVTAVAGDGMTEGDAYVTNQVTKPAVIAPPTVTQ
NTITLSLNWTQPTGVASGYWVEWYNGGKSERRLTSTTSAIIQDLTPGTLYTLQVFAIAED
NSTEGNPCTVYVYTKPAVVRNLSVSEITTSSVSLNWTQPEGNSSFYRVNWTGGSVSKNTT
GTSTTITELTAGVQYNFTVTAVAGDNTTVGEGSQTTTLTKPEQPGNITATGRGTSQLNVT
WTSRGGSLYYYNVTIFNAALNYTSMKNTTTMEASLTGLQPGRVYVVTVTAVVGAFSNQSA
VVQLATYPNQPGPLNITERTTSSLVVQWTTPGLMTGASAISYNISYQPNGTGLGERNQSS
STHDLSSNVTSLFSGALYTITVKTVGPQDLESASVSISAYTLPKPVVNLTATPLSTSSVK
LQWNDPVEVKWYYTYRVQYRNATDPVEKRVSTNYTVVEGLESGTGYNCTVTSVAALGSEG
TPERTFCYTKPKAVSNLTGEGLNTTAIRLSWSKPNDYKPTYSYLVTISKNGSVVENISTM
VEAYTFINLCPGYSYNISVVTVVQGVKSDPMEKSSYTKPGVVTNITAIGNTTYMSVTWDK
PVGQVDNYTVTIYKNNVMEKKCTNRSVFEFQNLKPGKVYVVNVATNSGPLTESLNVTIAT
YPNPPGAIIVVDQTTGSINISWARPLDMDLGQYNFSVFHLDQQTLTEHNWTLLENLQSGT
LYNISVVTVGPWGYQSTVVTTAISTRPQSVINVTAGITPTNVTLVWVQPESKPGYSFRVD
VTNGSFSWPVTANTTMKTITGLQSGSNYSFTVTTLTGDGTMATPVTVSYFTRPFTVSGLV
ASTVNTTTVNLTWTKPPEYQSGYRYRIQTEVCVSAPTNRTTTGEGDLISELTPGTKCTFS
VSVKALDGIEGDIVLTYQYTKPESVKTSISNLGSNSTIVVRWEAPKGNVENYKVCLNKVI
FSDLLNSSIRSTSFPNLPAGREYTAVVTTISGPFNATSEPNTTATYPNMPGPILILEKTT
SSISVKWGEAPLMANTNFSYLVTYLSTQLNNNMSIIQTTNYTLPSLSSGTPYNISVATLG
VLGIQSEKVWSSLVTTRPESVQSLSVVTAEENITLNWVKPVGHKPGYRYNVTRTNSGLTE
LTAMENIIIEQLVPGSLYNFTVTTETADGTEGAPVSTSSCTNASPVSKLMCDSPNAPNAK
VTLSWTKPKGLNQGFQITAYETNQLSKDQVHNTTSGDCNPACGHVVSDLKHYTNYTLTVT
TLGCGNSSTVQTLTCKTGITVPPIPANSSLFSSATVKDHNSFSIQLDPRLLNDTNGPIKN
YGVLVTSDITNVNNSNSMQYLVKTYQEWDESSTTAYLATVKENPSNNPSNSRRRKRAGNI
DIVIGDKTSWKKYTNGQLKANRLYSYAIVLFTETVVNSNGLLNVTSSLVSITVFNPSPVV
LTQDPVAIGMAVGVTLGVFAILFIITVGLIIHWRKQTKKDTSEIQIHSMRAKVSVAVRVE
DYEAYYKRQRADSNCGFAEEFEDLKPVGTAQAKTSAMAMENKSKNRYNNVLPYDSSRVKL
SIHGSPFDDYINSNYIPGYNSRKEFIAAQGPLPVTVNEFWRMIWEKNVQTLVMLTRCNEQ
GRVKCEEYWPSETKHFQNITVTTTSEIPLEDWTIREFDVKNVRTAETRSVRHFHFTAWPD
HGVPETTELLINFRHLVREHMDQYSRHSPTVVHCSAGVGRTGTFIAIDRLIFQIERDSTV
DVYGTIHDLRMHRPLMVQTEDQYLFLNQCAMDIIRSRTGTNVDLIYQNTAALTIYENVEP
RKDTPKNGYHNA
NT seq
7779 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaactaccaaggagacagcctttaacgtaactgagctgactgctggagtgaag
tacacattcagggtcactgcagtggctggagatgagatgactgaaggcaaaactatcagt
gtttcactctttacaaagcccgcaatcatcagaaacctcactgtcactgaaatcacaaca
tcatctgtgtctctgagctggattgaaccattgggaaacagatccttctacagagtagaa
tggactggtggcgttagagatatgaatacaactaccaaggagacagcctttaacgtaact
gagctgactgctggagtgaagtacacattcagggtcactgcagtggctggagatgagatg
actgaaggcaaaacgatcagtgtttcactctttacaaagcccgcaatcatcagaaacctc
actgtcactgaaatcacaaaatcatctgtgtctctgagctggattgagccgttgggaaac
agatccttctatagaatagaatggactaatggcggtagagatatgaatacaactaccaat
gagacagcctttaatgtaactgagctaactgctggagggaagtacacattcaaggtcact
gcagtggctggtgataatataactaaaggaaatgctcaggagaaagcactctttacaaaa
cctgaagtcatcaggaacctcactgtctctgaaatcacaacatcatctgtgtctctgagc
tggattgaaccattgggaaacagatccttctacagagtagaatggactggtggcgttaga
gatatgaatacaactaccaaggagacagcctttaacgtaactgagctgactgctggagtg
aagtacacattcagggtcactgcagtggctggagatgagatgactgaaggcaaaactatc
agtgtttcactctttacaaagcccgcaatcatcagaaacctcactgtcaatgaaatcaca
acatcatctgtgtctctgagctggattgagccgttgggaaacagatccttctatagaata
gaatggactaatggcggtagagatatgaatacaactaccaatgagacagcctttaatgta
actgagctaactgctggagggaagtacacattcaaggtcactgcagtggctggtgataat
ataactaaaggaaatgctcaggagaaagcactctttacaaaacctgaagtcatcaggaac
ctcactgtctctgaaatcacaacatcatctgtgtctctgagctggattgaaccattggga
aacagatccttctacagagtagaatggactggtggcgttagagatatgaatacaactacc
aaggagacagcctttaacgtaactgagctgactgctggagtgaagtacacattcagggtc
actgcagtggctggagatgagatgactgaaggcaaaactatcagtgtttcactctttaca
aagcccgcaatcatcagaaacctcactgtcaatgaaatcacaacatcatctgtgtctctg
agctggattgagccgttgggaaacagatccttctatagaatagaatggactaatggcggt
agagatatgaatacaactaccaatgagacagcctttaatgtaactgagctaactgctgga
gtgaagtacacattcaaggtcactgcagtggctggtgataatataactaaaggaaatgct
caggagaaagcactctttacaaaacctgaagtcatcaggaacctcactgtctctgaaatc
acaacatcatctgtgtctctgagctggattgaaccattgggaaacagatccttctacaga
gtagaatggactggtggcgttagagatatgaatacaactaccaaggagacagcctttaac
gtaactgagctgactgctggagtgaagtacacattcagggtcactgcagtggctggagat
gagatgactgaaggcaaaactatcagtgtttcactctttacaaagcccgcaatcatcaga
aacctcactgtcactgaaatcacaacatcatctgtgtctctgagctggattgaaccattg
ggaaacagatccttctacagagtagaatggactggtggcgttagagatatgaatacaact
accaaggagacagcctttaacgtaactgagctgactgctggagtgaagtacacattcagg
gtcactgcagtggctggagatgagatgactgaaggcaaaacaatcagtgtttcactcttt
acaaagcccgcaatcatcagaaacctcactgtcactgaaatcacaacatcatctgtgttt
ctgaactggagtaaaccattgggaaacagatccttctatagaatagaatggactggtggc
agtagagatatgaatacaactaccaatgagacagcctttaatgttactgagctaactgct
ggagtgaagtacacattcagagtcactgcagtggctggagatgggatgactgaaggagat
gcttatgtaacaaatcaagtcacaaaacctgcggtcatcgcaccccctactgtcactcag
aacaccatcactctttctctgaactggacccagcctacaggagtggcatcaggctactgg
gtggagtggtataacggagggaaaagcgagagacgacttacatccacaacctctgccatc
atacaggacctgactccaggaaccctgtacacactccaggtctttgccatcgctgaagac
aattcaacagaaggcaacccttgcacagtatacgtatacacaaagcctgcagttgtccgc
aacctttctgtctctgaaatcacaacatcatctgtgtctctgaactggactcaaccagag
ggaaacagctccttctatagagtaaattggactggtggcagtgtcagtaagaataccaca
ggaacctccactaccatcactgagctgacggctggagtgcagtacaacttcacagtcact
gcagtggctggagataacacaactgtaggagaaggcagtcaaacaaccactttaacaaag
cctgaacaacctgggaacattacggcgacgggacgaggaaccagtcagctgaatgtgacc
tggacctcgcgtggcgggagcctgtactattacaacgtgaccatctttaatgctgctttg
aactatacatccatgaaaaacacaacgaccatggaggccagcttaactgggttacagcct
gggagggtctatgtggtcacagtgactgctgtagttggagccttcagtaaccagtctgct
gtggtccagttagccacttatcccaaccaacctggacccctcaacatcacagagaggaca
accagctccctcgttgttcaatggacaaccccaggtctaatgactggagcttcagccatc
tcctataacataagctaccagcctaatgggactggtttgggagagagaaaccagtcttcc
tctacccatgatctcagcagtaacgtgacctctctgttctctggagctctctacaccatc
acagtgaaaaccgtgggaccccaggatctggaaagcgccagtgttagtatatctgcatat
accttgcccaaaccagtggtgaacctcacagccaccccattgtccacctcctcagtgaag
ctacagtggaatgaccctgtggaggttaagtggtactacacctacagagtccagtacaga
aacgctacagaccctgtagagaaaagagtcagtaccaactacacagtcgtcgagggccta
gaatctgggactggctacaactgcactgttacctcggtagcagcactgggaagcgaggga
actccggaacgcacgttctgttacacgaagcccaaggcggtcagtaacctcacgggcgag
ggtctgaacacaactgctatcagactttcctggtccaaaccgaatgactacaaaccaacc
tactcctatctggtgaccatctccaagaatggttctgtggttgagaacatctcaaccatg
gtcgaggcgtacacattcatcaatctctgtcctgggtacagttacaacatctctgtggtc
acggtcgtccagggggttaagtctgatccaatggagaagtcaagctacacaaaacctggg
gtggtgacaaacatcaccgccataggaaacacaacctacatgagtgtgacctgggataaa
cctgtgggacaggtggacaactacactgtcactatctacaaaaacaatgtgatggaaaag
aaatgcaccaaccgttcagtatttgagttccagaacctgaagccagggaaagtctatgtt
gtcaatgtggccaccaatagtggaccgctcactgagtcactgaatgttacaattgcaacg
tatcccaaccctcctggagccatcatagtggtggaccagaccactggttccatcaacatc
agctgggcccggcccctggacatggacctaggtcagtacaacttctctgtgttccatctg
gaccagcagaccctgacggaacacaactggaccctcctggagaacctccagtctggaaca
ctctacaacatctccgtggtaaccgtagggccgtggggctaccagagcacagtggtgacg
acggccatctctaccaggccccagtctgtgatcaatgtgactgcaggaatcacccccacc
aatgtgactctagtctgggttcagccagagagcaaaccaggctactccttccgggtggat
gtcaccaacgggtccttttcttggcccgtcaccgccaacaccaccatgaaaaccatcacc
gggttacagtctgggagcaactacagctttaccgtgacaacactcacaggggacggaacc
atggcaaccccggtgacggtgtcctattttacaagaccattcaccgttagtggtttggta
gcctctacagtgaacacaaccactgtgaatctgacctggaccaaaccacctgagtaccag
agtggttacagataccgtatccagaccgaggtttgcgtgtctgctcccacaaaccgcacg
acaacaggagagggggacctcatctcagaactcacaccaggaaccaaatgcaccttcagt
gtttccgtcaaggcactggacggcatagagggagacatcgtcttaacctatcagtacaca
aagcctgagtctgtcaagacgtccatctccaaccttggtagcaacagtaccatagtggtg
cgctgggaagcgcccaaagggaacgtagagaattataaagtctgtctgaacaaggtcatt
ttctcagatttgctgaactccagcattcggtcaacatccttccctaatctgccagctggc
agagagtacacagccgtggtgaccactatcagtgggcccttcaatgctacatcagaacct
aatactacagcaacttatcccaacatgcctgggcccatcctgatcttggagaagacgact
agttctatctctgtgaagtggggtgaagctcctctgatggcaaacaccaacttcagttac
ctagtgacctacctgtcaacgcaactaaacaacaacatgagcataatccaaaccaccaat
tacacactgcccagcctgtcctctggaacaccctacaatatctctgtggctacattggga
gtgctagggatccagagtgagaaggtctggagcagtttggtcacgaccagaccagagagt
gtccagtccctcagtgtagtgacagcagaagagaacataacattgaactgggtcaagcct
gtgggtcacaaaccaggctaccgctacaatgtgaccaggaccaactctgggttaacagag
ttaacagctatggaaaacataatcattgaacaattggtccctggtagtctgtataacttc
accgtgacaacagagacagctgacggaacagagggagctccagtctcaacctccagctgc
accaatgccagccctgtgtccaagctgatgtgtgactctcctaacgcccccaatgccaag
gtgactctgtcctggaccaaacccaaaggactgaaccagggcttccagatcactgcttat
gaaaccaaccaactctccaaggaccaggtacacaataccactagtggtgactgtaaccca
gcctgtggccacgtagtctctgacctaaagcactatacaaactacaccctgactgtaacc
actctgggctgtgggaattccagcactgtccaaaccctcacctgcaagactggcattaca
gtccctcctatcccagctaactcgtcgctattctctagtgccactgtgaaagatcacaac
tccttctctatacagctggaccccagactcctgaatgacaccaacggaccaatcaaaaac
tacggcgtgctggtgacctctgacatcaccaatgtaaataattctaactcaatgcagtac
ttagtgaagacctatcaggagtgggacgaaagctctactacggcatacttagccacggtc
aaagagaatcctagcaacaaccctagcaacagccggaggaggaaacgtgcaggaaacatt
gacattgtcataggggacaaaacctcatggaaaaaatataccaatggccaactgaaggcc
aatcgcttatacagttatgccattgttttatttactgaaacagtggtaaattcgaacggg
cttctgaacgtcacttcctcactcgtctcgataactgtgttcaacccaagtcctgtggta
ctcactcaggacccagtggccatcggtatggctgtcggggtaacgcttggagtttttgcc
atcctcttcatcatcaccgttggcttaatcatccactggaggaaacaaaccaagaaagac
acttcagaaatccagattcactccatgagagctaaagtaagcgtggccgtgagggtggag
gactatgaggcgtattacaagaggcagagagcagactccaactgtggctttgccgaggag
tttgaggacctgaagccagtgggaacagcccaagctaaaaccagcgctatggccatggag
aacaagtctaagaaccgctacaacaacgtgcttccctatgattcctctagagtgaaactg
tccatccatgggagtccattcgacgactacatcaattctaactacatcccgggttacaac
tccaggaaggagtttattgcggcccaaggtcctttgcccgtcaccgtcaacgagttctgg
aggatgatctgggaaaagaacgtccagactttggtcatgctgacacgctgtaacgaacag
ggacgagtgaaatgtgaggaatactggccatctgagaccaagcactttcagaatatcacc
gtgacaacaacctctgagatccccctagaagactggaccatcagggaatttgacgtaaaa
aacgtgaggacggcggagacacgctcggtgcgtcacttccacttcacagcctggccggac
cacggcgtccccgagaccacggagctgctcatcaacttcagacacctggtccgagaacac
atggaccagtactcacgccactcccccactgttgtccactgcagtgcgggtgtgggtcgt
acaggtaccttcatagccatcgaccggctgatcttccagatagagagggacagtacggtg
gacgtgtacggcaccatccatgacctgcgcatgcaccggcccctcatggttcagaccgag
gaccagtatttgttcctaaaccagtgtgccatggacataatccgatccagaactggaacc
aacgtggacttaatctaccagaacacggctgcactcaccatctacgagaacgtagaaccc
aggaaagatacacctaagaatggttaccacaacgcatag
DBGET
integrated database retrieval system
