Coregonus clupeaformis (lake whitefish): 121540705
Help
Entry
121540705 CDS
T08357
Symbol
abcc8
Name
(RefSeq) ATP-binding cassette sub-family C member 8
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121540705 (abcc8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121540705 (abcc8)
Transporters [BR:
cclu02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
121540705 (abcc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
ABC_ATPase
AAA_29
nSTAND1
AAA_23
Beta-prop_IFT122_1st
TraD_N
Motif
Other DBs
NCBI-GeneID:
121540705
NCBI-ProteinID:
XP_041705681
LinkDB
All DBs
Position
26:36383416..36545637
Genome browser
AA seq
1583 aa
AA seq
DB search
MSLAFCGNENNSLAYNVDRGVLNNGCFLDALNVVPHIFLLFITFPILFIGWGSQSSKVHI
HHSTWLHFPGHNLRWLLTFILLFVLVCEIAEGIVSDGFTQSLHLHLYMPAGLAFMAGITS
IIYYHNIETSNFPKLLLALLFYWVLAFLMKTIKFAKYTEHGIGLRQLRYCITGLLVLLYG
LLLAVEINVILGRRYLCFTEAMEVKPPEDLQDLGVRFLQPFVNLLSKATYWWMNTFITAA
HHRPIDLKVIGKLPIAMRALTNYLKLRKAFESQRRPLGSMPQGPKWIWRALRQAFGRPLI
ISITFRFLADLLGFAGPLCISGIVHHISKDNRTIQPPIKLLGVYFISSQEFLANAYVLAV
LLFFALILQRTFLQASYYVAIETGINLRGAIQTKIYNKIMRLCTSNMSMGELTVGQICNL
VAIDTNQLMWFFFLCPNLWAMPVQIIVGVILLYYLLGISAFIGATVIAVLAPVQYFVATK
LSQAQKSTLEYSSERLKKTNELLRGIKLLKLYAWEHIFCHSVEETRGKELISLQAFALYT
TISIFMNAAIPIAAVLTTFVVHVHISEEADLSPAVAFASLSLFHILVTPLFLLSSVVRST
VKALVSAQKLSEFFSSDEIGDEQEPNATMPSGPSNHNSKYQAVPLKVVNRKRHPRDDWNN
YSHEGGDPPPQEGDQDLCIRITSGYFTWTDGTPTLSNVDIKVPFGQLTMIVGQVGCGKSS
LLLAALGEMQRVSGTVTWNILPSLDSEGDDSPTSDKDAAGDGDIQKRGSVAYASQKPWLL
NATLVENITFEMPMIKPRYKAVIEACSLQPDIDILPQGDQTEIGERGIILSGGQRQRIGV
ARVLYQQTNVVLLDDPFSALDIHLSDHLMQEGILKLLREEKRTVVLVTHKLQYLPHADWI
IAMKDGTIQTEGTLKDIQNSDPELFEQWKTLMHRQDGEFEKETVAESMTVLERKNLRRAM
YSKEAAKTEEEHEEESVESDEDDNLSQAMRHRATIPWRSCGVYLSSAGLLLLSLLLLSQL
FKHSFMVAIDYWLAHWTSHVITAKMDAAGRNCTVAQECGFSHSWYLSVFSVLCCLGIILC
LVTSVAVEWTGLRVAKELHHNLLSKIILAPMRLFETTPLGNILNRFSSDTNTIDQHIPAT
LECLSRSTLLCVSALGVISYVTPVFLIALVPLAIACYFIQKYFRVASRDLQQLEDSTQLP
LLSHFSETVEGLTTIRAFRYEPRFRQRLLEYTDANNIASLFLTAANRWLEVRMEYIGACV
VLIAAVASITNSLYNHLSTGLVGLGLTYALMVSNYLNWMVRNLADMEVQLGSVKRINGLL
KTEPENYEGLMAASQVPDGWPRQGEIQIQNLSVRYDTTLKPVLKQVNAHISPGQKVGICG
RTGSGKSSFSLAFFRMVDMFEGRIIIDDIDIAKLPLQTLRSRFSIILQDPILFSGTIRFN
LDPEIKATDDMLWEALEIAQLKPVVKTLPGGLDATVTEGGENFSQGQRQLFCLARAFVRK
SSILIMDEATASIDMATESILQKVVMTAFADRTVVTIAHRVHTILNADLVIVMKRGIILE
YDRPQALLEKEDSVFASFVKADK
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgtccttggcgttctgtggaaacgagaacaactcgttggcgtacaacgtggaccgcggc
gtcctcaacaatggctgcttcctggacgcgctcaacgtggtgccgcacatcttcttgctc
ttcatcactttccccatcctcttcattggctggggcagccagagctccaaggtgcacatc
caccacagcacctggctgcacttccctggtcacaacctgcgctggctcctcaccttcatc
ctcctcttcgtcctggtctgtgagattgcagagggcatcgtctccgatgggttcacacag
tccctccacctgcacctgtacatgcctgcaggcctggccttcatggctgggatcacctcc
atcatctactaccacaatatagagacctccaacttccccaagctactgctagctctactg
ttctactgggtcttggcctttctgatgaagaccatcaagtttgccaagtacacagagcac
ggcatcggcctgagacaactccgctactgcatcacaggactcctggtcctgctctacgga
ctactgctggctgtggagatcaacgtcatactgggcaggcgctacctatgtttcactgag
gctatggaggtgaagcccccagaggacctgcaggacctgggggtgcggttcctgcagccc
ttcgtcaacctgctgtccaaggccacctactggtggatgaacaccttcatcacggcagcc
caccaccgccccatcgacctcaaggtcatcggcaagctgcccatcgccatgcgagccctc
accaactatctgaagctccgcaaggctttcgagagccagaggaggcctctgggctccatg
ccgcagggccctaagtggatctggagggccctacgccaggcgtttggacggcccctcatc
atcagcatcaccttccgcttcctggctgacctgctgggcttcgctgggcccctctgtatc
tctggcatcgtccatcacatcagcaaggacaaccgcaccatacagcccccaataaagctg
ctgggggtctactttatctcctctcaagagttcttggcgaatgcctacgtgctggccgtg
ctgctgttcttcgccctcatcctgcagagaaccttcctccaggcctcgtattatgtggct
atcgagacgggcatcaacttacgaggggctatacagactaagatctacaataagatcatg
cggctgtgcacctccaacatgtccatgggagaactgacagtaggacaaatctgtaacctg
gtcgccatagataccaaccagctcatgtggttcttcttcctctgtcccaacctgtgggcc
atgccagtccagatcattgtgggggtgattctactctactacctcctggggatcagtgcc
tttatcggggccacagtcatcgctgtcctggcccctgtgcagtactttgtggctaccaag
ctgtcccaagcacagaagagcactctggagtactccagtgagcggttgaagaagaccaat
gagctgctgcggggcatcaagctgctgaagctgtacgcctgggaacacatcttctgtcac
agtgtggaggagaccaggggcaaggagctcatcagcctgcaggccttcgccctctacaca
accatatctatattcatgaacgcagccatccctatcgcagctgtcctgactacgtttgtg
gtccatgtgcacatctctgaggaggctgacctgtcccctgctgtagccttcgcctccttg
tctctgttccacatcctggtcactcccctcttcctgctctccagcgtggtacgatccaca
gtcaaggccctggtcagcgcccagaagctgagtgagttcttcagtagtgatgagattgga
gatgagcaggaacccaatgctaccatgccctccggccccagcaaccacaacagcaagtac
caggcagtgcctctgaaggtggtgaacaggaagagacatcccagggatgactggaacaac
tatagccatgagggaggcgaccctcccccccaggagggagaccaagacctctgcatcagg
ataaccagtggatatttcacctggacagacgggactcccaccctgtctaacgtagacatc
aaggttccctttggtcagctgacaatgatcgtgggccaggtgggttgtgggaagtcgtcc
ctgttgctggcagctctgggagagatgcagagagtctctgggactgtcacctggaacatt
ttgcccagcctggactcagagggagatgacagccccacatcagacaaggatgcagctggt
gatggagatatccagaagagaggctctgtggcctacgcttcccagaagccctggctgctc
aatgcgacgctagtggagaacatcaccttcgagatgcccatgatcaaacccaggtacaag
gctgtcattgaggcgtgttccctgcagccagatatcgacatcctgccacagggagaccag
acggagattggagagaggggtataattctgtcaggagggcagcgccagcgtataggtgtt
gccagagtcctgtaccaacagaccaatgtggtcttgctggatgacccattctcagcgctg
gacattcacctgagtgaccacctgatgcaggagggcatcctgaaactgctgagagaagag
aagaggactgtggttctggtcactcacaaactgcagtacctaccacatgctgactggatc
atagcgatgaaagacggcaccattcagaccgaggggactctgaaagacatccagaactct
gatcctgagctgtttgaacagtggaagaccctgatgcaccggcaggatggggagtttgag
aaggagacagtggctgagagtatgacggtgttggagcgtaagaacctgcggagggccatg
tactccaaggaagctgccaagactgaggaggagcacgaagaagagtctgtggaaagtgac
gaggatgacaacctgtcccaggccatgcgtcaccgcgccaccatcccctggcgctcctgt
ggggtctacctgtcctctgcagggctcctcctcctgtcgctgctcctcctatcacagctc
ttcaaacactccttcatggttgcaatcgactactggctggcccactggacctcccacgtc
atcactgccaagatggacgccgccgggagaaactgcaccgtcgctcaggagtgtggtttc
agccactcgtggtacctgtcagtgttcagtgtgctgtgctgtctgggcatcattctgtgt
ctggtcacctctgtggccgtagagtggacaggactgagagtggccaaagaactacaccac
aacctgctcagcaagatcatactggcacctatgaggctgtttgagaccactcccctgggc
aacatcctcaacaggttctcctctgacaccaacactatagaccagcacattcctgccacc
ttggagtgtctgagtcgctccaccctgctgtgtgtgtcggcgctgggggttatctcctat
gtgacccctgtgttcctcatcgccctggtgcccctggccatcgcctgctacttcatacag
aagtacttccgggtcgcctccagggacctccagcagttggaggatagtacccagctcccc
ctcctgtcccacttctcagagacagtggagggcctcaccaccatccgggcattcaggtat
gagcccaggttcagacagaggttactggagtacaccgatgccaacaatatcgcctccctc
tttctcacagcagccaatcgctggctagaggtccgcatggagtatataggagcctgtgtg
gttctgatagcagctgtggcctccatcaccaactctctatacaaccacctctccactggc
ctagtgggactaggactcacctacgcactcatggtatctaactacctgaactggatggtg
cgtaacctggcagacatggaggttcagctgggttcagtcaagaggatcaacggcctgctg
aagactgagcctgagaactatgagggactgatggctgcatctcaggtgccggatggctgg
ccaaggcagggagaaattcagatccagaacctgagtgtgcgttacgacaccaccctgaaa
cctgtcctcaaacaagtcaacgcacacatcagccctggacagaaggtggggatctgtggt
aggacaggaagtgggaagtcttctttctccttggccttcttccgcatggtcgacatgttc
gaggggcgtatcatcatcgatgacattgacattgctaagctgcctctgcagactctgagg
tctagattctccatcatcctccaggatcccatcttattcagcggaaccatccggtttaac
ctggacccagagataaaggctacagacgacatgctgtgggaggctctggagatcgctcag
ctcaaacctgtagtcaagaccttaccaggaggactggacgccacggtgacagagggaggg
gagaacttcagccagggccagagacagctcttctgtctggccagagccttcgtcaggaag
tctagcatcctcatcatggatgaagccacagcctctatagacatggccacggagagcatc
ctccagaaagtggtgatgactgccttcgctgacagaacagtggttaccatagcacatcgt
gtccacaccatcctgaacgcagacctggtgatagtgatgaagagagggatcattctagaa
tacgacagaccccaggcactgctggagaaagaagacagcgtcttcgcctcatttgtcaag
gcggacaagtga
DBGET
integrated database retrieval system
