Coregonus clupeaformis (lake whitefish): 121540735
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Entry
121540735 CDS
T08357
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X1
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cclu03110
]
121540735
Chaperones and folding catalysts [BR:
cclu03110
]
Heat shock proteins
HSP100
121540735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
AAA_5
Mg_chelatase
AAA_14
AAA_22
AAA_7
Sigma54_activat
IstB_IS21
AAA_16
NACHT
Sigma54_activ_2
RuvB_N
nSTAND3
ABC_tran
TsaE
DEAD
ResIII
AAA_18
AAA_28
AAA_23
NqrM
T2SSE
Motif
Other DBs
NCBI-GeneID:
121540735
NCBI-ProteinID:
XP_041705723
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All DBs
Position
26:45465714..45502349
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AA seq
627 aa
AA seq
DB search
MSCPCTSAARIFLNSAHRGLSCSRVQLYALSRPGWSVRGAPLPPRVRVRSFHETAACFTS
KDGTTKDGSSDGGKKNLGERKRLSGSSGGSGKGGNQLHCPKCGDPCTHVETFVSSTRFVK
CEKCHHFFVVLSETDSKKGLNKEPESPAEAVKMAFVQKPPPPPKKIYAYLDKYVVGQSYA
KKVLAVAVYNHYKRIHNNIPAGSRQVEVDKQASLTPRELETRRREDEYRFTKLLQIAGIS
PHGNALGASMQQQATQQAPQERRGGDVLDSTHTDIKLEKSNIVLLGPTGSGKTLLAQTLA
KCLDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYSVDKAQQGIVFLDEVDKIGSVP
GIHQLRDVGGEGVQQGLLKLLEGTIVNVPEKNSRKLRGETVQVDTTNILFVASGAFNGLD
RIISRRKNEKYLGFGTPSNMGKGRRAAAAADQANSSEQTDMVAEMEEKDRLLKLVEARDL
IDFGMIPEFVGRLPVVVPLHSLDEETLVRILTEPRNAVIPQYQALFSMDKCELNVTTDAL
RAIARLALERKTGARGLRSIMEKLLLEPMFEVPCSDIMAVEVTEDVVQGKSEPQYVRAPE
KESAEEDYDSGIEEENWPRQVDAAANN
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgcccatgcacatcggccgcgaggatattcttgaattcagcacacagagggctg
tcttgttcccgggttcagctctatgctttgagcaggcctggttggagtgttcgtggagca
cccctacctcccagagtccgagtgagatccttccatgaaacggcagcgtgttttacctct
aaagatggaaccaccaaggatggatccagcgacggtggaaagaagaacctcggtgaaaga
aagagactgtcgggctcttctggtggatcagggaaggggggtaaccagctgcactgtccc
aaatgtggagacccgtgcacacatgtggagacctttgtatcgtcaacacgttttgtgaag
tgtgagaaatgccatcacttcttcgtggtgctctctgagacagactctaagaagggtctg
aataaagaaccagagtcgcccgctgaggctgtcaaaatggccttcgtacagaaacctccc
ccgccacccaaaaagatctatgcctacctggacaagtacgtagtgggtcagtcctatgct
aagaaggtgctggcggtggctgtgtataatcactacaagaggatccacaacaacatccct
gctgggagcagacaggtggaggtggataaacaggcctcgctcacaccacgagagctagag
accagaagacgggaggatgagtacagattcacaaaactccttcagatagcagggatcagt
ccccatggcaacgctctgggggcctccatgcagcagcaggccactcagcaggctcctcag
gagaggaggggcggggacgtgttagactccacccacaccgacatcaaactggagaagagc
aacatcgtgttgctaggccctaccggatcaggaaagacattgttggctcagaccctggcc
aagtgtctagatgtacccttcgccatctgtgattgtaccaccctgacccaggctggctat
gtgggggaggacatcgagtctgttatcgctaagctgctgcaggatgccaactactctgtg
gataaagcacagcaaggcatagtgtttctggatgaggtggacaagatcggcagtgttccc
gggatccaccagctcagagacgtaggaggagagggagtacaacagggtctgctcaaactc
ctggagggcacgatagtgaacgtcccagagaagaactccaggaagctgagaggagagacg
gtgcaggtggacaccactaacatcctgttcgtagcgtcaggggccttcaacggactcgac
agaatcattagcagacggaagaatgaaaagtacctgggcttcgggacgccctccaacatg
ggtaagggtcgccgtgcggcggcagcggccgaccaggctaacagcagtgaacagacggac
atggtggcagagatggaggagaaggaccggctgctgaagctcgtggaggcccgggacctc
attgattttgggatgatcccggagttcgtggggcgtctgccagtggtggtgcctctgcac
agtctggatgaagagacgctggtccgcatcctgacagaaccgcgcaacgccgtcataccc
cagtaccaggccctgttcagcatggacaagtgtgaactgaatgtaaccacagatgcactg
agggccatcgccaggctggctctggagaggaagacaggagcccgtggcctgaggtccatc
atggagaagcttcttctggagccaatgtttgaggtcccgtgttcagacatcatggccgtg
gaggtaacggaggacgtggtccagggtaaatcagaaccacaatacgtcagggcgccagag
aaggagtcagcagaggaggactatgactctggtattgaagaggagaactggcccagacag
gtggacgcagcagccaacaactga
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