Coregonus clupeaformis (lake whitefish): 121540770
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Entry
121540770 CDS
T08357
Symbol
mars2
Name
(RefSeq) methionine--tRNA ligase, mitochondrial
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00450
Selenocompound metabolism
cclu00970
Aminoacyl-tRNA biosynthesis
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
121540770 (mars2)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121540770 (mars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cclu01007
]
121540770 (mars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121540770 (mars2)
Enzymes [BR:
cclu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
121540770 (mars2)
Amino acid related enzymes [BR:
cclu01007
]
Aminoacyl-tRNA synthetase
Class I (U)
121540770 (mars2)
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
121540770 (mars2)
Prokaryotic type
Other AARSs
121540770 (mars2)
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GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
Motif
Other DBs
NCBI-GeneID:
121540770
NCBI-ProteinID:
XP_041705794
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Position
3:13736921..13748836
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AA seq
610 aa
AA seq
DB search
MMKTYLSIIRNCKVAQRWSFSHATRCALSPSPSFSSKWNCKMLMVRRMGTDIPTEDRTYY
ITTPIFYVNAAPHIGHLYSAVTADYLHRYKLLQGFNSRFATGTDEHGLKIQQAADAAGQD
PLSFCTKVSEGFKHLFESFHISYTDYIRTTEERHRCAVEHFWTVLQSKGFIYKGSYEGWY
STQDESFLTPSQVGDAKDSSGKEIKISLESGHKVEWMKEENYMFRLSEFRSRLQEWLEGN
PRAVQPERFHHAVLQWLQEDLPDLSVSRQRSRLQWGIPVPGDLDQTIYVWLDALVNYLTV
AGYPDTHSQWWSAAHHVVGKDILKFHAIYWPAFLLAADLPLPQTIHVHSHWTVGGKKMSK
SLGNVVDPLERSQRFTTDGMRYFLLRQGVPDTDCNYDDDKVVKLLNAELTDSLGGLINRC
TAPSLNPAQVYPHFCTDSFPSQRTKAHEGRAVDEDYHMLDAVHALPAVVEQHYESVHVYK
ALEAINGCVRQTNGFVQRHTPWKLDRGDGRDQLWLDTILHVSLECLRMYGTLLQPIVPEI
ADKLLSRLGVKPEERSWAALDFLVKYQGKDCPFEGRALGPDTGVLFNRLERPNAEKGKPK
KAKKATKVKS
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagacgtacctctccataatcagaaactgtaaggttgcacagagatggtcattc
agccatgctacaagatgtgcactttctccatcaccatcattctcctcaaaatggaattgc
aaaatgctcatggtgagacgcatgggcacggatatccccacggaagatcggacctattac
atcaccacccctatcttctatgtgaatgctgcccctcatattggacacctgtactcggct
gttacagctgactacctgcacagatacaagcttctacaggggttcaactccaggtttgcc
acaggtacagatgagcacggcctcaaaatccaacaggctgctgatgctgccggacaggat
cctctaagtttctgcactaaagtatctgagggattcaaacacctcttcgagagctttcac
atctcatacacagactacattcgtaccactgaggagagacaccgctgtgcagtggagcac
ttctggaccgtgcttcagagtaaaggcttcatctataaggggagttatgaaggctggtac
tccacgcaagacgagagcttcctcacgccatcacaggtgggcgatgccaaggattcatca
gggaaggagatcaagatctctctggagagcggccacaaggtggagtggatgaaggaggag
aactacatgttccgtctgtctgagttccggtcccggctgcaggagtggctggaggggaac
cccagagcggtgcagccagaacggttccaccacgccgttctccagtggctccaggaggac
ctcccagacctctccgtctcccgccagagaagccgcctccagtggggcattccggttccc
ggtgacctcgaccagacaatctacgtgtggttagacgccctggtcaactacctcacagtg
gccggttacccggacacacactctcaatggtggagtgctgcccatcatgtcgtgggaaag
gacattctgaaattccacgccatctattggccggcattcctactggctgctgacttgccc
ctcccacagaccatacatgtgcactctcattggacagtgggggggaagaaaatgtctaaa
agcttggggaatgtggtggacccgctggagaggtctcaaaggttcaccacagacggtatg
agatacttcctcctgcgccagggggtcccagacacagactgtaactatgacgatgataaa
gtggtcaaactgctcaatgctgagctgacagactcgctgggtggccttattaaccgctgc
actgccccctctctcaacccagctcaggtctacccccacttctgcactgactccttcccc
agtcaacggaccaaagcacatgaggggagggctgtggatgaagattatcacatgctggac
gctgtacatgcactaccagccgtggtggagcagcactacgagagtgtgcacgtgtacaaa
gctctggaggccattaacgggtgtgtgaggcagaccaacggctttgtccagcggcacacg
ccatggaagttggacaggggggatgggagagaccaactgtggctggacaccatcctccac
gtgtccctagagtgtctgaggatgtatgggacactcctccagcccatagtgccagagata
gcagacaaacttctgtccaggctgggggtgaagccagaggagaggagctgggctgctctg
gacttcctggttaaatatcagggaaaggactgcccctttgagggcagagcactgggtcct
gacactggagtcctgtttaatcgtctggagaggccaaatgcagagaagggaaagcccaag
aaagctaagaaagccactaaagtgaaatcgtaa
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