Coregonus clupeaformis (lake whitefish): 121540792
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Entry
121540792 CDS
T08357
Name
(RefSeq) enhancer of mRNA-decapping protein 3
KO
K12615
enhancer of mRNA-decapping protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121540792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121540792
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121540792
mRNA degradation factors
5'-3' decay
Decapping complex
121540792
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Edc3_linker
YjeF_N
FDF
LSM14
DUF5096
Motif
Other DBs
NCBI-GeneID:
121540792
NCBI-ProteinID:
XP_041705820
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Position
26:complement(44219579..44225403)
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AA seq
479 aa
AA seq
DB search
MAADWLGSLVSINCGATLGVYQGEVSSVDQSSQTISLRQPFHNGVKCPVPEVTFSAMDIK
ELKVLDIGSSRGGVVQKSSAPVSVPHIGDHRTQERLASPQQQCSTSSGDKHLEVSGQPKG
FRRRHNSWSSSSRGANQVTPKKNGGGGGGWGQRQHRDDECFGGNMDDSLDTDFDFEGNLA
LFDKAAVFSQIDGSDRHGNGARSRAMPQVQTSSQYRHNDNILETKPVGYRQILVPHPGDK
EYCTDWGLVVPSISYELHKRLLSVAERHGLSLERRLEMTGVCASQMALTLLGGPNRLTPK
NVHQRPTVALLCGPHVQGAQGISCGRHLANHEVEVILFLPNFVKVLDAVASELTLYSKTE
GKRVSSIKELPDSPVDLIINCLDCHENTFLMDQPWYRAAADWANQNRAPVLSLDPPVSGQ
GHAVEAKWTLSLGLPLSLSEGAGRVYLCDIGVPRQVFQEVGIKYHSPFGCKFVVPLHSA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagactggttgggtagtctggtgtcgataaactgcggagcaacgctaggggtg
taccaaggcgaggtgtcgtctgtggaccagtccagtcagaccatctccctcagacagccc
ttccacaatggagtcaagtgccctgtgcccgaggtcacttttagtgccatggacatcaag
gagctgaaggtcctggacataggtagtagcagaggtggtgtggttcagaagagcagcgct
ccagtctcggtcccacacataggagaccacaggacccaggagaggctggcttcaccacag
cagcagtgctctacaagctctggagataaacacctggaggtgtcaggccagcccaagggc
ttcagacggagacacaactcctggtcgtccagtagtcggggcgccaaccaggtcaccccc
aagaagaacggaggaggaggaggaggatggggtcagaggcagcacagggacgatgagtgt
ttcgggggcaatatggacgacagcctggacacagactttgacttcgaggggaacctggcg
ctgttcgacaaagcggccgtgttctcacagatcgacgggtcggatcgccacggtaacggg
gcccggtcacgcgctatgccgcaggtgcagacgtcgtcgcaataccgtcacaatgacaac
attctagagaccaaacctgtggggtacaggcagatacttgtcccacatcctggggataaa
gagtattgcactgattggggcctggtggtgcctagtatttcctacgagctgcacaagcgt
ctgttgtcagtagctgagcgtcatggcctctcattggagaggaggctggagatgacaggt
gtttgtgccagtcagatggccctgacgctgctgggcgggcccaacagactgacccctaag
aacgtccaccagcggcccaccgtagcgttgctctgcggcccccatgtccagggagctcag
ggcatcagctgtggtcgtcacctggccaaccacgaggtggaggttatactcttcctgcct
aatttcgtcaaggtgctggacgccgtcgccagcgagctcaccctctacagtaagacggag
ggcaaacgggtctccagtattaaagagcttcccgacagccctgtggacctgatcatcaac
tgcttggattgccatgagaacacctttctgatggatcagccatggtaccgggccgctgca
gactgggccaaccagaacagggctcccgtgctcagcctggatcctccagtcagcggacag
ggccatgccgtagaggccaagtggaccctgtccctgggtctgccgctctcgctgtcggag
ggcgccggcagggtctacctgtgcgacataggtgttcccagacaggtgttccaggaagta
gggatcaagtatcattctccgttcgggtgtaagtttgtggtgccgttgcactctgcgtaa
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