Coregonus clupeaformis (lake whitefish): 121540794
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Entry
121540794 CDS
T08357
Name
(RefSeq) proteasome activator complex subunit 4A-like isoform X1
KO
K06699
proteasome activator subunit 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121540794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cclu03051
]
121540794
Proteasome [BR:
cclu03051
]
Eukaryotic proteasome
Regulatory particles
PA200
121540794
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_PSME4_mid
HEAT_PSME4
PSME4_C
HEAT
TPR_Trm732_C
HEAT_2
Filament
Motif
Other DBs
NCBI-GeneID:
121540794
NCBI-ProteinID:
XP_041705823
LinkDB
All DBs
Position
31:complement(34251952..34304606)
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AA seq
1869 aa
AA seq
DB search
MKEDVSEKLGFVPQKDIVYNKLLPYADILDEESNDILRKIKGNLGRAVQLREIWPGVLFW
TRKLSTYMRLYGRKFSKEDHVLFIKLLYELITIDKLEISMMQGLARLLINLLKKRELLSR
EDLELPWRPLYELQDRILYSKTEHLGLNWFPKKRAVKKKQIRKCAMPLLQYKKSSLRPRA
SSKHVMIKLFQRCSVENVLKTLVKSCRPYFPESATQEMLEEWRPLLCPFDVTMQRAIGYF
ELFLPTTLPPELHHKGFKLWFDELISLWVAVQNLPGWEVHLVNLFARLANDNIGYIDWDP
YIPKIFTRILRSLNLPVGTSQMLVPRYLTNAYDVGHVVLWVSALLGGPTKQAQAQLSGLF
NSITSFFHPSNHGRWLMKLMKLLQRLPASVVRRLHRERYRKPTWLTPVPDSHKMTEADIT
AFVESMMQPVLLAMFSKTGSLDAAQALQNLALMRPELVIPPVLEKTYPAMETLTEPHQLT
ATLSCMIGVARSLVSGGQRFPEGPTHMLPLLMRALPGVDPNDFSKCMITFQFIATFATLV
PLVDCSSAVHERSDLTEVEREMCSASAEFEDFVLQFMDRCFALIDSSTLEQTREETETEK
MTHLESLVELGLSSTFSTILTQCSIDIFKVALEKVFNFATTNIFETRVAGRMVADMCRAA
SKCHPAQSLKLFVPHCCNAINQIAVNEEVLSEEELDKELLWNLQLLSEVTRVDGDKILPY
CTQLVQILQLTLHLKCKQGYTLACNLLHHILRSTALIYPTEYCSVPGGFQQSTQDYLPIK
DWGRPGDLWNLNIQWHVPSVEETRFVFYVLDLILQPELLRLQRYAQGEQDMTRDDVLQSL
SIVQHCLLGAGSLLPLLQGEPIPELVTSLVNLGETNLFTGMADDVSRENYRDAICRVMRQ
LLHHILEHSEDDTKSLFSIIKIISDLLHFKGSHKHEFDSRWKSFNLVKKSMENRLHGRKQ
HIRALLIDRVMLQHELRKLTVEGCEYRSIHQELMRDLLRLSTSTYSQVRSRAQSVLFTAL
GTYNFCCRDLIPRVLEFLEPDRADVTQQQFKGALYCLLGNHSGVCLANLHDWDCITLTWP
AIVRSGLSSAMSLEKPSIVRLFDDLADKVHRQYETIGIEVAIPSACRAVAVQLQTSGVPL
PQDPVPSDKEEAEGLRKQEEKNLDSVQKYESLVGELLDCLNDRNMPWKFEHNAIGFMSLL
LRDDHPLPSPAVLFFVKSLNHDSLLVRKLAISAVAGIMKQLKRPHKKVPVSPNELCGLKE
PAGIIAGDRPDNQWLQYNSSSLPRTQQDWEGCTFVEKTHWGYYSWPQKLMMYSPSEEQPK
QGLTREEMTEREQIIYDHFSDPVFINQLIEFLSLEDRKGKDKFSPRRFCLFKGLFRNFND
AFLPVLKPHMERLVADTHESKQRCVAEITSGLIRGSKHWSYGKVERLWEQLCPLLRTALN
NITVETYADWGTCIATACESRDPRKLHWLFEMLMESPVNGEGGSFVDACRLYVLQGGLAQ
QEWRVPELLHRLLQYLEPKLTQVYKNVRERIGSVLTYIFMIDVNLPYTQPTASPRIKEFT
ERVLMRLKPLTEGDEEIQNHVVEENEVGEQDERTQAIKLLKTVLKWLMASAGRSFSTAVP
EQLQLLPLLFKIAPVENDDSYDELKRDAKTCLSLMSQGLLYTEQIPLVLLALQEIAGSSS
WHARYTVLTYLQIMVFYNLFTFMSDQGAVNDVRALVIRLLEDEQLEVREMAATTLSGFLQ
CNFLSIEGPMQNHFEALCKTRLPKKRKRELGSVVDTIPSGDLVRRHAGVLGLSACILSSP
YDVPTWMPQLLMNLSAHLNDTQPIEMTVKKTLSNFRRTHHDNWQEHKQQFTDDQLLVLTD
LLVSPCYYA
NT seq
5610 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagacgtgtcggagaaattaggatttgtccctcaaaaagacatcgtctacaac
aaacttctgccatacgcggatatattagacgaggaatccaatgacattttgcgtaaaatc
aaaggaaacttgggccgggctgtccagcttcgagagatatggccgggtgtcttgttttgg
acaaggaaactttccacgtacatgcggttgtacggcaggaagttcagcaaggaggaccat
gtgctgttcatcaagctgctgtacgagctgatcaccatcgacaagctggagatcagtatg
atgcaaggcctcgcccggctactcatcaacctcctcaagaaaagagagctgctgtcgcgg
gaggaccttgagttgccttggagacccctgtacgagctgcaagacaggatcctctactca
aagactgaacacctgggcctaaactggttccccaaaaaacgagccgtgaaaaaaaaacag
atcagaaaatgtgcaatgccgctgctgcagtacaaaaaaagttccctacggcctcgtgct
tcctctaaacacgtaatgataaaattgtttcagaggtgctcggtggaaaacgtgttgaaa
acacttgtgaaaagctgcagaccgtacttcccggagtcggccacccaggagatgttggag
gagtggcgtccactgctctgtccgtttgatgtgaccatgcagagagctataggatacttt
gagctcttcctccccaccacccttcccccagagctgcaccacaagggcttcaagttgtgg
tttgatgagctcatcagcttgtgggtggcagtacagaaccttccaggttgggaggtgcat
cttgtcaacctgtttgcccgcttggccaacgacaacattggctacattgactgggaccct
tatataccgaagatcttcactagaatcctacgtagtctgaatctcccggtggggaccagt
cagatgctggttcccagatacctgacaaacgcctacgatgtcgggcacgtggtcctctgg
gtctccgctttactgggaggccccactaagcaagcccaggcacagctcagtggccttttc
aacagcatcacatctttcttccacccatccaaccatggacgctggctgatgaagttgatg
aagctgctgcagcgcctcccggccagcgtggtgcgccggctccaccgggagcgctaccgg
aaacccacgtggctcacgccggtaccggacagccacaagatgacggaggcagacatcacg
gcattcgtggagagtatgatgcagccggtgctgctggccatgttcagtaagacgggcagt
ctggacgctgctcaggccctgcagaacctggccctcatgaggcccgaactcgtcatacca
ccagtgctggagaaaacctaccctgctatggagacactgacagagccccaccagctgact
gccaccctgagttgtatgatcggcgtggctcgcagcctggtgtctgggggccaacgcttc
cccgaggggcccacacacatgctgcccctcctcatgagggccctgcccggggtcgacccc
aacgacttcagcaagtgcatgataacgttccaattcattgctacgtttgcgactcttgtg
cctttggtggactgttcatctgctgttcatgaaaggagcgacctgacagaggtggagaga
gagatgtgctcagcctctgcagagtttgaggactttgttcttcagttcatggacaggtgt
tttgccctgatagacagcagtactctggagcagaccagagaggagaccgagacagagaag
atgacccatctggagagcctggtggagctgggactgtcttctaccttcagtaccatcctc
acacagtgctccatagacatcttcaaggtggctctggagaaggtcttcaactttgccacc
accaacatctttgagactcgtgtggctggcaggatggtggctgacatgtgcagagcagcc
tccaagtgtcacccggcacagtctctgaagctttttgtgccccactgctgcaatgccata
aaccagatcgctgtcaatgaagaggtgttgagtgaggaggaactggataaggagttacta
tggaacctccagctactgtcagaggtgactcgtgtagacggggacaagatcctcccttac
tgcacccagctggttcagatactgcagctgaccctccatctgaagtgtaaacagggctac
accctggcctgtaacctgctgcatcatatcctgaggtcaacagccctcatctaccccaca
gagtactgcagtgttccaggaggctttcagcagtccacacaggactacctacccatcaag
gactggggtcgtccgggggacctgtggaacctgaacatccagtggcacgtccccagtgtg
gaggagacccgctttgtgttctacgttcttgacctgatcctacagccagagctgctccga
ctgcagagatacgcccagggggaacaggacatgaccagggatgacgtcctacagagtttg
tccatcgtacagcactgccttctgggagcaggtagcctgttgcccctgctgcaaggagag
cccatccctgaactggtgactagcttggtgaatctgggggagaccaacctcttcacaggg
atggccgatgatgtgtccagagaaaactacagagatgctatctgcagagtgatgaggcag
ctgctacatcacattctggagcactcagaggacgacaccaagtctctgttctccatcatc
aagatcatcagtgacctgctgcacttcaaaggctcccacaaacacgagtttgactctcgc
tggaagagcttcaacctggtcaagaagtccatggagaacaggcttcatggcaggaagcag
cacatccgagccctgctaattgacagagtcatgctacagcacgagctgcgtaagctaaca
gtggaggggtgtgagtacaggagtatccaccaggaactgatgcgggatctgctgaggctc
tccaccagcacctacagtcaggtgcgtagccgggctcagagtgtgctgttcacagctcta
gggacctataacttctgctgcagggacctgatcccccgcgtgctggagttcctggagcca
gaccgcgccgacgtcacacagcagcaattcaaaggtgccttgtactgtctcttggggaac
cacagtggggtgtgcctggccaacctgcatgactgggactgcatcaccctgacctggcct
gccatcgtccgctcaggcctcagctcagctatgtccctggagaagccctccatcgtccgg
ctgttcgacgacctcgctgacaaggtccaccgtcagtacgagaccatcggcatcgaagtc
gctatcccatcagcgtgtcgtgctgtggcggtacagctccagacctctggtgttcccctt
ccccaggaccctgtcccctcagataaagaagaagcagagggcctcaggaagcaggaggag
aagaacctcgactcagttcagaaatatgagagtctggttggtgaacttctggactgcctc
aacgacagaaacatgccctggaagtttgagcacaatgccattggcttcatgtctctgttg
ctgagagatgaccaccctctcccctcccccgctgtcctcttctttgtcaagagcctcaac
cacgactccctcctggtccgcaagttggcgatatcagccgtggcagggatcatgaagcaa
ctcaagaggccgcataaaaaagtgccagtcagccccaacgagctctgtggtctaaaggag
ccggctggtataatagcaggagacaggcctgataaccagtggctccagtataacagtagc
agtctgcctcgtacccagcaggactgggagggctgtacatttgtagagaagacccactgg
ggatactacagctggccacagaaactcatgatgtactctccctctgaggagcagcccaaa
caaggactgaccagagaggagatgacagagcgagaacagatcatctacgaccacttttca
gacccagtgttcatcaaccagctgattgagttcctctctctggaggaccggaagggcaag
gacaagttcagcccccgcaggttctgccttttcaagggtctgttccgtaacttcaacgat
gccttcctgcccgtgctgaaaccacacatggagcgtctggtggctgacacacacgagagc
aaacagcgctgtgtagcagagatcacctctggactgatcagaggcagcaagcactggagc
tatggcaaggttgagagactgtgggagcagctgtgtcctctgctccgtacagctctaaac
aacatcactgtagagacctacgctgactggggcacctgcatcgccactgcctgtgagagc
agagaccccaggaagctccactggctgtttgagatgctgatggaatctccagtcaacggg
gaggggggatcctttgtagacgcctgtcgtctgtatgtgctgcagggaggcctggctcag
caggagtggagagtccctgagctgctccacagactgctacagtacctagagcccaaactc
acacaggtctacaagaacgtccgcgagcgcatcggcagcgtcctcacctacatcttcatg
attgacgtgaacctgccgtacacccagcctacagcctcacctcgcatcaaggaattcaca
gagcgtgtactgatgcgcctcaaacccctgacggagggggacgaggagatccagaaccac
gtggtagaggagaacgaggtgggggagcaggatgagaggacacaggccatcaaactactg
aagacagtactcaagtggctgatggccagtgctggacgctctttctccacggctgttcca
gagcagctccagttgctgccactgctgttcaagatcgctccggtggagaatgatgacagt
tatgatgagctgaagagggatgccaagacctgtctgtctctgatgtcccagggactgctc
tacacagagcagataccactggtcctactggccctgcaggagatagcgggcagcagttcg
tggcatgctcgctacacggtgctgacgtacctacagatcatggtcttctacaacctgttc
acctttatgagcgaccagggagccgtcaacgacgtcagagcactggtcatacgcctgctg
gaggacgagcagctagaggtgagggagatggctgccaccactctgagcggtttcctccag
tgtaacttcctgtccatagagggccccatgcagaatcacttcgaggccctctgcaagacc
cgcctgcccaagaagaggaagagggagttgggctctgtggtggacaccatcccctccgga
gatctggtgcggcgtcatgctggagtgttaggtctgagtgcctgtatcctgtccagcccc
tacgatgtacccacctggatgccccagctactgatgaacctcagtgcccacctcaacgac
acacagcccattgagatgacggtgaagaagaccctgtctaacttcaggcggactcaccat
gacaactggcaggagcataaacagcagtttactgacgaccagctgctggttctgaccgac
ttgctggtctctccctgctattatgcctag
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