Entry |
|
Symbol |
thbs2a
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Name |
(RefSeq) thrombospondin-2 isoform X1
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KO |
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Organism |
cclu Coregonus clupeaformis (lake whitefish)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:cclu00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121540797 (thbs2a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121540797 (thbs2a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
121540797 (thbs2a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121540797 (thbs2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:cclu04131]
121540797 (thbs2a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:cclu04147]
121540797 (thbs2a)
00536 Glycosaminoglycan binding proteins [BR:cclu00536]
121540797 (thbs2a)
Membrane trafficking [BR:cclu04131]
Endocytosis
Phagocytosis
Opsonins
121540797 (thbs2a)
Exosome [BR:cclu04147]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121540797 (thbs2a)
Exosomal proteins of colorectal cancer cells
121540797 (thbs2a)
Exosomal proteins of bladder cancer cells
121540797 (thbs2a)
Glycosaminoglycan binding proteins [BR:cclu00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
121540797 (thbs2a)
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
31:34566151..34598170
|
AA seq |
1191 aa
MILRRSLNLLPILLLCSSALPQDGEVTMDDDTTFDLFDISGITRKTLGAKQFRGQDTDNP
AYRFIRFDHLPSVSAPVLKQMLQQIQNNEGFVFVASMRQDRGSRGTLIALEGTNGQRQFE
IVSNGRANTLDLVYWVDGSQNVVSFEDVDLSDSQWKNITLHVHGENANLFVGCSLIDSFI
LDEPFYEHLQAEESRMFVAKGSIRENHFRGLLQNVRFMFDTSVDDVLRNKGCEVTKPDEA
NVVVSESTDMVDVSPATAITTNFIGQKTEKLGADMCERSCEELSTMFQELKGLRVVVGNL
IDGLQKVTEENTVMKDALGKMKNSKEKHMCWQDGRLFEDKEDWVVDSCTTCTCQDSKIVC
HQITCPPVACASPSFIDGECCPVCLSKDSEDGWSPWSEWTECTVTCGTGTQQRGRSCDAT
SNTCSGPSIQTRKCSLGKCDSRVRQDGGWSLWSPWSSCSVTCGEGQITRIRHCNAPTPQL
GGKDCEGQGRETQRCEAKPCPIDGGWGPWSPWAICSATCGGGVKGRTRVCNSPEPQYGGK
KCPGETNDSNACNKQDCPIDGCLSNPCFGGVDCNSAPDGSWECGLCPLGFRGNGTHCEDV
NECDMVSDVCFKAGGALRCVNTDPGFHCLACPPRYKGTQPFGMGVEAAKKNKQVCEPENP
CKDKTHNCHRSSECIYLSHFSDPMYKCECRIGYAGDGFICGEDSDLDGWPNQNLVCGANA
TYHCRKDNCPNLPNSGQEDFDKDGQGDACDQDDDNDGIMDERDNCPLMYNPRQFDFDKDD
VGDRCDNCPYEHNPAQIDTDHNGEGDACAVDIDGDEILNEQDNCPYVYNNDQKDTDMDGV
GDQCDNCPLLHNPDQADTDNDLVGDQCDNNQDIDEDGHQNNLDNCPYVANSNQADHDKDG
KGDACDFDDDNDGIPDDRDNCRLTPNKDQLDSDGDGRGDACKDDFDNDNIPDILDVCPEN
NAVSVTNFRKFQMVHLDPKGTTQIDPNWVVRHQGKELVQTVNSDPGIAVGFDEFNAVDFS
GTFYVNTDRDDDYAGFVFGYQSSGRFYVVMWKQITQTYWEDKPSKAFGISGVSLKVVNST
TGTGENLRNALWHTGNTKNQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGK
QILADSGPVYDKTFAGGRLGLFVFSQELVFFSDLKYECRDKLEFPTVLSIR |
NT seq |
3576 nt +upstreamnt +downstreamnt
atgatactcaggagaagtctcaacttgctgcccattttattactttgctcctcagcacta
cctcaagatggcgaggttactatggatgacgacacaacgtttgacctgtttgatattagc
ggtatcacacgcaagactctgggcgccaagcaattccgtggtcaagacacggacaacccc
gcttaccgcttcatccgcttcgaccatttgccctctgtgagcgcgcccgtgctcaaacag
atgcttcagcaaatccagaacaatgagggcttcgtgttcgtggccagcatgcgccaggac
cgtggctcgcggggaaccctcatcgccttggaaggcaccaacggccaacggcagtttgaa
attgtctccaacggtcgcgccaacacgctggaccttgtctactgggtggacggctctcaa
aatgttgtctccttcgaggatgttgacctgtctgactcgcagtggaagaatatcacactt
catgttcatggcgaaaatgcaaatctgtttgtgggctgcagtctcatcgacagcttcatc
ttggacgagccattctacgagcacctgcaggcagaggagagccgaatgttcgtcgccaag
ggatccatccgcgaaaaccactttagggggttactgcagaatgttcgcttcatgttcgac
acatccgtggatgatgttctcaggaataaaggctgtgaagtcactaagccagacgaggcc
aacgtggtggtgagtgagagcacagatatggtagatgtgagtcccgccacagccatcacc
actaacttcatcggccagaagacagagaagctgggagcagatatgtgtgaacgatcctgt
gaggaactcagcaccatgtttcaggagctcaaaggactgcgtgtagtagtggggaacctc
attgacggcctgcagaaagtgacagaggagaacacagtaatgaaggatgctttggggaag
atgaagaactccaaggagaaacacatgtgctggcaggacggacggctgtttgaagataag
gaggactgggtggtggacagctgcaccacgtgtacctgccaggactcaaagatcgtgtgt
caccaaattacttgtcctcctgtggcctgtgctagcccctccttcatcgacggagagtgt
tgccccgtgtgtctatctaaggacagtgaggatggctggtccccctggtcggaatggaca
gagtgtactgtcacctgtgggacaggtactcaacagagaggacgctcatgtgatgccacc
agtaacacctgctccggaccatccatccagaccaggaaatgcagcctgggaaaatgtgac
agccgagttcgtcaggacggtgggtggagcctgtggtctccgtggtcatcatgctcggtg
acgtgtggtgagggccagatcaccaggatacgccactgcaatgcccccacaccacaactg
gggggcaaggactgtgagggccaggggagagagacacagcgctgtgaggccaagccctgt
ccaattgacggtggttggggaccgtggtcgccatgggcgatctgctcggcaacttgtggg
ggtggagttaagggtcggacccgtgtctgtaacagccccgaaccccagtacggaggcaag
aagtgccccggggagaccaacgacagtaatgcctgcaacaaacaagactgccctatcgac
ggttgtctgtctaacccatgcttcggaggagtggactgtaacagcgcccccgacggatcc
tgggagtgtgggctatgccctctcggtttccgtggcaacggaacccactgcgaagatgtc
aacgagtgtgacatggtatctgacgtatgctttaaagctggtggagcattgcgttgcgtc
aacacagacccagggtttcactgtctggcctgcccaccccgctacaagggaacgcagccc
ttcggcatgggggtggaggctgccaagaagaacaaacaggtctgcgagccagagaacccc
tgcaaagacaagacccacaactgtcaccggtcctcagagtgtatctacctcagccacttt
agtgaccccatgtacaagtgtgagtgcaggatcggctacgctggtgatggcttcatctgt
ggagaggactcagacctggatggatggcctaatcagaacctggtgtgtggcgccaacgcc
acctatcactgcagaaaggataactgccccaacctgcctaactctggacaggaagatttt
gacaaagacggccagggagacgcttgtgaccaggatgatgacaacgatggaatcatggat
gaaagagacaactgtcctctaatgtacaaccccagacagtttgactttgataaggatgat
gtgggggatcgttgtgacaactgcccctacgaacacaaccctgcccagatcgacaccgac
cacaacggggaaggagatgcctgtgctgtcgacattgatggagatgaaatcctaaacgag
caagacaactgcccgtacgtgtacaacaatgaccagaaggacactgacatggatggagtt
ggtgaccagtgtgacaactgtcctctgctacacaaccctgaccaggctgacacagacaat
gaccttgtaggagaccagtgtgacaacaaccaagacattgatgaagacggtcaccagaat
aacctggacaactgtccttacgtcgccaactccaaccaggcagaccacgataaggatggc
aagggggacgcctgtgacttcgacgatgacaatgacggtatccctgacgatagggacaac
tgtagattgacacccaacaaagatcaactggactctgatggcgacggtagaggcgacgcc
tgcaaagacgactttgacaacgacaacatcccggacatccttgatgtgtgtcctgagaac
aacgccgtcagcgtcacaaacttccggaagtttcagatggtgcacctggaccccaaggga
acaacgcagatcgaccccaactgggtggttagacatcagggcaaggagctggtacagacc
gtcaactctgaccctggcattgctgttggctttgatgagttcaacgcggtggacttcagt
ggtaccttctacgtgaacacggaccgggatgacgactacgcaggctttgtgttcggctac
cagtctagcggccgcttctacgtggtgatgtggaagcagatcactcagacctactgggaa
gataaaccctccaaggccttcggtatctctggtgtctcccttaaggtggtcaactcaacc
acaggcacaggggagaacctgagaaacgccctgtggcacacaggcaacacaaaaaatcag
gtgcgcactctgtggcacgacccaaagaacattggctggaaggattacacagcctacagg
tggcacctcatccacagacccaagactggattcatcagggttgtggtttatgaaggaaaa
cagatcttggcagactcaggaccagtgtacgacaagacgtttgctggaggacggttaggc
ctgtttgtcttctcccaggaactggtcttcttctccgatctcaaatatgagtgtagagat
aagctggagtttccaactgtgttgtccatcagataa |