Coregonus clupeaformis (lake whitefish): 121540875
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Entry
121540875 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: riboflavin transporter 2-like
KO
K14620
riboflavin transporter 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
121540875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121540875
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC52: Riboflavin transporter
121540875
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GFIT
Motif
Pfam:
SLC52_ribofla_tr
DUF267
Motif
Other DBs
NCBI-GeneID:
121540875
NCBI-ProteinID:
XP_045063851
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Position
26:49479523..49486280
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AA seq
455 aa
AA seq
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MTLLTHVLACLFGMGSWVAINGVWVELPVIVPEIPEGWYLPSYLTVLIQMANVGPLFVTL
MHRFRPGKLDERPVIYSIVGLGVVATFLLAFLWKHTVPLAGATHSVPLLVLCFLLSVVDC
TSSVTFLPFMMRLGPQYLTTYFVGEGLSGLVPAVVALVQGVGVVHCQNATVANGTLGINS
TVGASGELHAQYQSANFSAQVFFLFLSAMMVVCLAAFLLLNHHPAVARERKREHYFNRGL
AEEKSDQALSLSHRPPEEKPMISSPDGPQRARRSSFGMGFYSRLEVAFIFVVLAWVNALT
NAVLPSVQSYSCLPYGNQAYHLAATMAAVANPVACFIAMFLPLRSLVLIGLLTIVGTGFG
TYIMAMAALSPCPLLVHSASGTALIVIAWILFVLTLSYVKVIIGVILRDEGHSALVWCGA
VVQLGSMLGALSMFPLVSVYGLFKSGDPCNTKCPK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgactctcctaacccacgtgctggcatgcctctttggcatgggctcctgggtggcaatc
aacggggtgtgggtggagctgcccgtcatcgtgcccgaaatccctgagggttggtacctg
ccctcttacctcactgtgctcatccagatggccaacgtggggccccttttcgtcaccctc
atgcaccgcttccgcccgggcaagctggacgagcggcccgtcatctactccatagtgggc
ctgggcgtggtcgccaccttcctcctggccttcctctggaagcacacggtgcccctagcg
ggcgctacgcatagtgtacccctcctagtgctctgtttcctactctccgtggtggactgc
acctcctcggtcaccttcctacccttcatgatgcgcctcgggccccagtacctcactacg
tactttgtaggggagggccttagtggcttggtgcctgccgtagtggctctggtgcagggg
gtgggggtggttcactgtcagaatgctacagtggccaatggaaccttagggattaactct
actgtaggggccagtggtgagctccatgctcaataccagtccgctaacttctcggcccag
gtcttcttcctcttcctcagtgccatgatggtggtgtgtctggccgccttcctcctgctc
aaccaccacccggccgtggccagggagaggaagcgcgagcactacttcaacagaggcctg
gcggaggagaagagcgaccaagccctgtccctgtctcacagaccaccagaggagaagccc
atgatcagttctccggatggcccccagagagcccggcggagctccttcgggatgggcttc
tacagtaggctggaggtggcgttcatctttgtggttctggcctgggtcaatgccctgacc
aatgcagtgctaccctcggtgcagtcttactcctgtctgccctatgggaaccaggcctac
catctggccgccaccatggcagccgtggccaaccctgtggcctgcttcatcgccatgttc
ctgcccttaaggtcgttggtgctgattgggcttctgacaatagttgggacagggtttggt
acttacatcatggccatggctgcactgagcccctgtcctctactagtccacagcgcctca
ggaaccgcactcatagtcatagcctggatcttgtttgtcctgaccctctcctatgtgaag
gtgatcattggggtgatccttcgggatgagggccacagtgccctcgtgtggtgtggagcg
gtagtgcagcttggctccatgctgggtgcactgtccatgtttcccttggtcagtgtctat
ggactgttcaaatcaggggacccttgtaacaccaagtgcccaaagtag
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